RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 MEGF8Q7Z7M0 2845 aa9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 TRAV39A0A0B4J263 110 aa9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 A0A1B0GUS0 222 aa9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 FSTP19883 344 aa9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 SERPINA2P20848 420 aa9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 MYF6P23409 242 aa9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 GP2P55259 537 aaKnown RBP9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 RBM11P57052 281 aaKnown RBP9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 PROK1P58294 105 aa9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 SLC35A2P78381 396 aa9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 IL13RA2Q14627 380 aa9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 IRF3Q14653 427 aa9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 FAM189A2Q15884 450 aa9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 AANATQ16613 207 aa9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 C17orf58Q2M2W7 97 aa9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 SLC22A6Q4U2R8 563 aa9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 FAM27D1Q5T7N8 215 aa9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 SLC35E4Q6ICL7 350 aa9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 SGMS2Q8NHU3 365 aa9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 MUL1Q969V5 352 aa9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 CYYR1Q96J86 154 aa9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 CDCA4Q9BXL8 241 aa9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 CLEC7AQ9BXN2 247 aa9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 METTL9Q9H1A3 318 aa9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 IL36GQ9NZH8 169 aa9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 CKLFQ9UBR5 152 aa9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 ST3GAL6Q9Y274 331 aa9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 SIGLEC9Q9Y336 463 aa9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 HILPDAQ9Y5L2 63 aa9.41□□□□□ -0.9
RABGGTA-216ENST00000560243 FUOMA2VDF0 154 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 VGLL3A8MV65 326 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 GEMIN2O14893 280 aaKnown RBP9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 TSPAN9O75954 239 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 MAS1P04201 325 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 CD1AP06126 327 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 CGB3P0DN86 165 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 CGB7P0DN87 165 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 SPHARQ15513 63 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 RSBN1Q5VWQ0 802 aaPredicted RBP9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 RNLSQ5VYX0 342 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 BRICD5Q6PL45 260 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 CCBE1Q6UXH8 406 aaPredicted RBP9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 IZUMO2Q6UXV1 221 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 HEPN1Q6WQI6 88 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 LYPD6Q86Y78 171 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 ABHD12Q8N2K0 398 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 OSR2Q8N2R0 312 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 JAGN1Q8N5M9 183 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 SUMF2Q8NBJ7 301 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 OR4D6Q8NGJ1 314 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 OR4P4Q8NGL7 312 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 OR13A1Q8NGR1 328 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 MYDGFQ969H8 173 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 MALSU1Q96EH3 234 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 MND1Q9BWT6 205 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 ANKRD60Q9BZ19 345 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 GAL3ST2Q9H3Q3 398 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 DUSP21Q9H596 190 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 C16orf95Q9H693 158 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 ZNF286AQ9HBT8 521 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 SCN3BQ9NY72 215 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 TAS2R3Q9NYW6 316 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 MRPS28Q9Y2Q9 187 aaKnown RBP9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 TBL2Q9Y4P3 447 aaKnown RBP9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 NOTCH1P46531 2555 aa9.4□□□□□ -0.9
RABGGTA-216ENST00000560243 MEIKINA0A087WXM9 373 aa9.39□□□□□ -0.91
RABGGTA-216ENST00000560243 OR7C1O76099 320 aaPredicted RBP9.39□□□□□ -0.91
RABGGTA-216ENST00000560243 CSTBP04080 98 aaKnown RBP9.39□□□□□ -0.91
RABGGTA-216ENST00000560243 GLP1RP43220 463 aa9.39□□□□□ -0.91
RABGGTA-216ENST00000560243 BDH1Q02338 343 aa9.39□□□□□ -0.91
RABGGTA-216ENST00000560243 ACSM3Q53FZ2 586 aa9.39□□□□□ -0.91
RABGGTA-216ENST00000560243 NHLRC3Q5JS37 347 aa9.39□□□□□ -0.91
RABGGTA-216ENST00000560243 TMEM219Q86XT9 240 aa9.39□□□□□ -0.91
RABGGTA-216ENST00000560243 NDNFQ8TB73 568 aa9.39□□□□□ -0.91
RABGGTA-216ENST00000560243 LEAP2Q969E1 77 aa9.39□□□□□ -0.91
RABGGTA-216ENST00000560243 FOXRED1Q96CU9 486 aaPredicted RBP9.39□□□□□ -0.91
RABGGTA-216ENST00000560243 CITED1Q99966 193 aa9.39□□□□□ -0.91
RABGGTA-216ENST00000560243 TMED9Q9BVK6 235 aa9.39□□□□□ -0.91
RABGGTA-216ENST00000560243 DPCDQ9BVM2 203 aaPredicted RBP9.39□□□□□ -0.91
RABGGTA-216ENST00000560243 OR6C3Q9NZP0 311 aa9.39□□□□□ -0.91
RABGGTA-216ENST00000560243 FOXJ3Q9UPW0 622 aa9.39□□□□□ -0.91
RABGGTA-216ENST00000560243 KBTBD11-OT1A0A1B0GTJ5 212 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 A6NDX4 124 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 ZNF729A6NN14 1252 aaPredicted RBP9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 H0YHG0 523 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 IGLV1-47P01700 117 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 IGHV3-7P01780 117 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 CRHBPP24387 322 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 NFYBP25208 207 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 HTR1DP28221 377 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 CD34P28906 385 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 VHLP40337 213 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 MED22Q15528 200 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 FBLN7Q53RD9 439 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 PRR31Q5SQ13 230 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 MINOS1Q5TGZ0 78 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 HIST2H2BDQ6DRA6 164 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 GLIPR1L1Q6UWM5 242 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 UNQ9370/PRO34162Q6UXP9 181 aa9.38□□□□□ -0.91
RABGGTA-216ENST00000560243 TMEM104Q8NE00 496 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms