RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 NDUFS7O75251 213 aa10.17□□□□□ -0.78
HERC1-205ENST00000559886 CD3DP04234 171 aa10.17□□□□□ -0.78
HERC1-205ENST00000559886 CSN2P05814 226 aa10.17□□□□□ -0.78
HERC1-205ENST00000559886 BTG1P62324 171 aa10.17□□□□□ -0.78
HERC1-205ENST00000559886 ZMYND11Q15326 602 aa10.17□□□□□ -0.78
HERC1-205ENST00000559886 OR52W1Q6IF63 320 aa10.17□□□□□ -0.78
HERC1-205ENST00000559886 ZNF497Q6ZNH5 498 aa10.17□□□□□ -0.78
HERC1-205ENST00000559886 ASCC1Q8N9N2 400 aaKnown RBP10.17□□□□□ -0.78
HERC1-205ENST00000559886 GAFA1Q96PS6 74 aa10.17□□□□□ -0.78
HERC1-205ENST00000559886 C7orf50Q9BRJ6 194 aaKnown RBP10.17□□□□□ -0.78
HERC1-205ENST00000559886 ZNF665Q9H7R5 613 aa10.17□□□□□ -0.78
HERC1-205ENST00000559886 EDARQ9UNE0 448 aa10.17□□□□□ -0.78
HERC1-205ENST00000559886 GCN1Q92616 2671 aaKnown RBP10.17□□□□□ -0.78
HERC1-205ENST00000559886 POM121CA8CG34 1229 aa10.17□□□□□ -0.78
HERC1-205ENST00000559886 ZNF736B4DX44 427 aaPredicted RBP10.17□□□□□ -0.78
HERC1-205ENST00000559886 K7N7A8 449 aa10.17□□□□□ -0.78
HERC1-205ENST00000559886 CD74P04233 296 aa10.17□□□□□ -0.78
HERC1-205ENST00000559886 PAX5Q02548 391 aa10.17□□□□□ -0.78
HERC1-205ENST00000559886 ATXN7L3Q14CW9 347 aaPredicted RBP10.17□□□□□ -0.78
HERC1-205ENST00000559886 SRSF7Q16629 238 aaKnown RBP eCLIP10.17□□□□□ -0.78
HERC1-205ENST00000559886 STEAP1BQ6NZ63 245 aa10.17□□□□□ -0.78
HERC1-205ENST00000559886 ZNRF1Q8ND25 227 aa10.17□□□□□ -0.78
HERC1-205ENST00000559886 BEST4Q8NFU0 473 aa10.17□□□□□ -0.78
HERC1-205ENST00000559886 MRPL30Q8TCC3 161 aaKnown RBP10.17□□□□□ -0.78
HERC1-205ENST00000559886 MAFIPQ8WZ33 124 aa10.17□□□□□ -0.78
HERC1-205ENST00000559886 CCL13Q99616 98 aa10.17□□□□□ -0.78
HERC1-205ENST00000559886 CHMP1AQ9HD42 196 aaPredicted RBP10.17□□□□□ -0.78
HERC1-205ENST00000559886 HRASLSQ9HDD0 168 aa10.17□□□□□ -0.78
HERC1-205ENST00000559886 CELSR2Q9HCU4 2923 aa10.17□□□□□ -0.78
HERC1-205ENST00000559886 CENPXA8MT69 81 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 H7C1Q1 480 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 PTTG1O95997 202 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 MT-ND4P03905 459 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 AKAIN1P0CW23 69 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 HLA-DMAP28067 261 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 RFX2P48378 723 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 KCNJ8Q15842 424 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 RSBN1Q5VWQ0 802 aaPredicted RBP10.16□□□□□ -0.78
HERC1-205ENST00000559886 MZT2BQ6NZ67 158 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 ZNF880Q6PDB4 577 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 PEG10Q86TG7 708 aaKnown RBP10.16□□□□□ -0.78
HERC1-205ENST00000559886 PPP1R35Q8TAP8 253 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 CHODLQ9H9P2 273 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 Q9N2K0 584 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 MYOZ1Q9NP98 299 aaPredicted RBP10.16□□□□□ -0.78
HERC1-205ENST00000559886 DOCK11Q5JSL3 2073 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 CENPEQ02224 2701 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 IGKV1D-8A0A087WSZ0 117 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 SIGLEC5O15389 551 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 NDUFA2O43678 99 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 IGHV2-70P01814 119 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 TK1P04183 234 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 TBPP20226 339 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 SSTR2P30874 369 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 IL13RA1P78552 427 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 GRK1Q15835 563 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 SLC35E4Q6ICL7 350 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 Q6ZS49 121 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 GDPD3Q7L5L3 318 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 OR4C16Q8NGL9 310 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 CHPT1Q8WUD6 406 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 COQ2Q96H96 371 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 TMEM246Q9BRR3 403 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 FAM234AQ9H0X4 552 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 ARID1AO14497 2285 aa10.16□□□□□ -0.78
HERC1-205ENST00000559886 A0A1B0GW55 424 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 NAP1L6A6NFF2 107 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 NKX6-3A6NJ46 265 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 MGST3O14880 152 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 TMPRSS2O15393 492 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 DUX4L2P0CJ85 424 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 DUX4L3P0CJ86 424 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 DUX4L4P0CJ87 422 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 DUX4L5P0CJ88 424 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 DUX4L6P0CJ89 424 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 DUX4L7P0CJ90 424 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 BTCP35070 178 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 FAUP35544 74 aaKnown RBP10.15□□□□□ -0.78
HERC1-205ENST00000559886 TMEM33P57088 247 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 AESQ08117 197 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 OXA1LQ15070 435 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 DUX4L9Q6RFH8 374 aaPredicted RBP10.15□□□□□ -0.78
HERC1-205ENST00000559886 NRARPQ7Z6K4 114 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 FAM216BQ8N7L0 139 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 OR4D10Q8NGI6 311 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 OR5D13Q8NGL4 314 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 OR4K15Q8NH41 348 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 MED30Q96HR3 178 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 LIME1Q9H400 295 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 KAAG1Q9UBP8 84 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 DUX4Q9UBX2 424 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 FBN2P35556 2912 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 TMEM30CPA0ZSE6 113 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 SSX4O60224 188 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 RAB3DO95716 219 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 SELLP14151 372 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 HRH1P35367 487 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 ACTBL2Q562R1 376 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 KRBOX4Q5JUW0 171 aa10.15□□□□□ -0.78
HERC1-205ENST00000559886 FAAP20Q6NZ36 180 aa10.15□□□□□ -0.78
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