RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 CLINT1Q14677 625 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 FAM76BQ5HYJ3 339 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 SPATA46Q5T0L3 261 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 ATP1A1-AS1Q5TC04 95 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 C20orf204Q6ZNR8 217 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 SELENOHQ8IZQ5 122 aaKnown RBP8.6□□□□□ -1.03
LRRC28-216ENST00000559819 DEFB123Q8N688 67 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 Q8NFD4 153 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 APOBEC3DQ96AK3 386 aaPredicted RBP8.6□□□□□ -1.03
LRRC28-216ENST00000559819 POM121L2Q96KW2 1035 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 GINS3Q9BRX5 216 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 TMEM222Q9H0R3 208 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 FAM212BQ9NTI7 297 aaPredicted RBP8.6□□□□□ -1.03
LRRC28-216ENST00000559819 MLXQ9UH92 298 aa8.6□□□□□ -1.03
LRRC28-216ENST00000559819 BORCS7-ASMTA0A0B4J1R7 106 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 IGSF23A1L1A6 192 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 ADAM20O43506 726 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 DANCRP0C864 163 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 OMGP23515 440 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 KCNJ3P48549 501 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 MEOX1P50221 254 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 DVL1P1P54792 670 aaPredicted RBP8.59□□□□□ -1.03
LRRC28-216ENST00000559819 EWSR1Q01844 656 aaKnown RBP eCLIP8.59□□□□□ -1.03
LRRC28-216ENST00000559819 IL13RA2Q14627 380 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 CXorf66Q5JRM2 361 aaPredicted RBP8.59□□□□□ -1.03
LRRC28-216ENST00000559819 TMEM182Q6ZP80 229 aaPredicted RBP8.59□□□□□ -1.03
LRRC28-216ENST00000559819 ZNF695Q8IW36 515 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 ZNF565Q8N9K5 539 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 LILRB1Q8NHL6 650 aaPredicted RBP8.59□□□□□ -1.03
LRRC28-216ENST00000559819 RXFP4Q8TDU9 374 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 ZNF407Q9C0G0 2248 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 ZFP57Q9NU63 452 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 FAM86C1Q9NVL1 165 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 TMED3Q9Y3Q3 217 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 CD300LBA8K4G0 201 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 LINC01387J3KSC0 135 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 SSSCA1O60232 199 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 SS18L1O75177 396 aaPredicted RBP8.59□□□□□ -1.03
LRRC28-216ENST00000559819 PRH1P02810 166 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 TK1P04183 234 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 SPP1P10451 314 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 IL32P24001 234 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 PMELP40967 661 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 GPR157Q5UAW9 335 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 ZFP82Q8N141 532 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 SUMF2Q8NBJ7 301 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 OR10Z1Q8NGY1 313 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 LYPD6BQ8NI32 183 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 RDH5Q92781 318 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 BOD1Q96IK1 185 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 DEFB127Q9H1M4 99 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 C11orf1Q9H5F2 150 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 PLSCR2Q9NRY7 297 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 C19orf12Q9NSK7 152 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 CACFD1Q9UGQ2 172 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 ATPIF1Q9UII2 106 aa8.59□□□□□ -1.03
LRRC28-216ENST00000559819 TRAV39A0A0B4J263 110 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 ARGFXA6NJG6 315 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 SEC11BP0C7V7 166 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 SNCAP37840 140 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 GNMTQ14749 295 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 OR2T2Q6IF00 324 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 MCEMP1Q8IX19 187 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 MKXQ8IYA7 352 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 C2CD4CQ8TF44 421 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 ABHD14AQ9BUJ0 271 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 ABI3Q9P2A4 366 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 KMT2EQ8IZD2 1858 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 FAM90A10PA6NDY2 464 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 FAM90A18PA6NE21 464 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 FAM90A16PA6NEW6 464 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 FAM90A20PA6NIJ5 464 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 FAM90A8PA6NJQ4 464 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 FAM90A7PA6NKC0 464 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 FAM90A22PA8MWA6 464 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 FAM90A12PA8MX19 464 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 FAM90A5PA8MXJ8 464 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 FAM90A23PA8MXZ1 464 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 NDUFA2O43678 99 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 RHBDL1O75783 438 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 CRYBA1P05813 215 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 FAM90A15PP0C7V4 464 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 FAM90A13PP0C7W8 464 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 FAM90A14PP0C7W9 464 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 FAM90A24PP0C7X0 464 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 PPP1CCP36873 323 aaKnown RBP8.58□□□□□ -1.04
LRRC28-216ENST00000559819 GUK1Q16774 197 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 MRPL30Q8TCC3 161 aaKnown RBP8.58□□□□□ -1.04
LRRC28-216ENST00000559819 OR5P3Q8WZ94 311 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 HIST1H2AAQ96QV6 131 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 C20orf24Q9BUV8 137 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 SCRT1Q9BWW7 348 aa8.58□□□□□ -1.04
LRRC28-216ENST00000559819 NCOR1O75376 2440 aa8.57□□□□□ -1.04
LRRC28-216ENST00000559819 IGHV3-64DA0A0J9YX35 117 aa8.57□□□□□ -1.04
LRRC28-216ENST00000559819 A0A1W2PR80 420 aa8.57□□□□□ -1.04
LRRC28-216ENST00000559819 MEX3AA1L020 520 aaKnown RBP8.57□□□□□ -1.04
LRRC28-216ENST00000559819 ZNF724A8MTY0 619 aa8.57□□□□□ -1.04
LRRC28-216ENST00000559819 COX5BP10606 129 aa8.57□□□□□ -1.04
LRRC28-216ENST00000559819 CD59P13987 128 aa8.57□□□□□ -1.04
LRRC28-216ENST00000559819 CA6P23280 308 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms