RNA–Protein interactions for RNA: ENST00000559718.1

USP3-214, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-214ENST00000559718 AKR1E2Q96JD6 320 aa9.25□□□□□ -0.93
USP3-214ENST00000559718 NR1H4Q96RI1 486 aaPredicted RBP9.25□□□□□ -0.93
USP3-214ENST00000559718 ALG8Q9BVK2 526 aa9.25□□□□□ -0.93
USP3-214ENST00000559718 INPP5EQ9NRR6 644 aa9.25□□□□□ -0.93
USP3-214ENST00000559718 EXOGQ9Y2C4 368 aaKnown RBP9.25□□□□□ -0.93
USP3-214ENST00000559718 ZNF281Q9Y2X9 895 aa9.25□□□□□ -0.93
USP3-214ENST00000559718 PCDHGB5Q9Y5G0 923 aa9.25□□□□□ -0.93
USP3-214ENST00000559718 KBTBD11-OT1A0A1B0GTJ5 212 aa9.24□□□□□ -0.93
USP3-214ENST00000559718 ZNF729A6NN14 1252 aaPredicted RBP9.24□□□□□ -0.93
USP3-214ENST00000559718 H0YJX3 145 aa9.24□□□□□ -0.93
USP3-214ENST00000559718 ZFPL1O95159 310 aa9.24□□□□□ -0.93
USP3-214ENST00000559718 HCKP08631 526 aa9.24□□□□□ -0.93
USP3-214ENST00000559718 GABRB1P18505 474 aa9.24□□□□□ -0.93
USP3-214ENST00000559718 CEACAM3P40198 252 aa9.24□□□□□ -0.93
USP3-214ENST00000559718 GLP1RP43220 463 aa9.24□□□□□ -0.93
USP3-214ENST00000559718 PRRX1P54821 245 aa9.24□□□□□ -0.93
USP3-214ENST00000559718 KRTAP10-11P60412 298 aa9.24□□□□□ -0.93
USP3-214ENST00000559718 DIAPH2-AS1Q14236 149 aa9.24□□□□□ -0.93
USP3-214ENST00000559718 KISS1Q15726 138 aa9.24□□□□□ -0.93
USP3-214ENST00000559718 ZSCAN26Q16670 478 aa9.24□□□□□ -0.93
USP3-214ENST00000559718 MEDAGQ5VYS4 303 aa9.24□□□□□ -0.93
USP3-214ENST00000559718 CHST4Q8NCG5 386 aa9.24□□□□□ -0.93
USP3-214ENST00000559718 OR4X2Q8NGF9 303 aa9.24□□□□□ -0.93
USP3-214ENST00000559718 OR13A1Q8NGR1 328 aa9.24□□□□□ -0.93
USP3-214ENST00000559718 PDCD1LG2Q9BQ51 273 aa9.24□□□□□ -0.93
USP3-214ENST00000559718 ZNF649Q9BS31 505 aa9.24□□□□□ -0.93
USP3-214ENST00000559718 ZNF581Q9P0T4 197 aa9.24□□□□□ -0.93
USP3-214ENST00000559718 KIF25Q9UIL4 384 aa9.24□□□□□ -0.93
USP3-214ENST00000559718 TRAV39A0A0B4J263 110 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 TRAV24A0A0B4J272 114 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 WI2-2373I1.2A0A1W2PRP0 233 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 H3BNX3 289 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 SULT1B1O43704 296 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 CIB2O75838 187 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 ATP5HO75947 161 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 SNRNP70P08621 437 aaKnown RBP9.23□□□□□ -0.93
USP3-214ENST00000559718 ARHGDIBP52566 201 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 SLC35A2P78381 396 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 GALEQ14376 348 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 LTC4SQ16873 150 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 PAN3Q58A45 887 aaKnown RBP9.23□□□□□ -0.93
USP3-214ENST00000559718 ZNF691Q5VV52 312 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 ZNF329Q86UD4 541 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 SERPINA12Q8IW75 414 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 OSR2Q8N2R0 312 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 PARP16Q8N5Y8 322 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 OR51A2Q8NGJ7 313 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 OR51T1Q8NGJ9 327 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 OR5D14Q8NGL3 314 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 OR10K1Q8NGX5 313 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 OR56B4Q8NH76 319 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 OR9G1Q8NH87 305 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 RFESDQ8TAC1 157 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 TOMM40LQ969M1 308 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 RPEQ96AT9 228 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 CREB3L1Q96BA8 519 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 RHOFQ9HBH0 211 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 AMBNQ9NP70 447 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 CALYQ9NYX4 217 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 OR6C3Q9NZP0 311 aa9.23□□□□□ -0.93
USP3-214ENST00000559718 MEIKINA0A087WXM9 373 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 A0A1W2PPI3 338 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 FAM90A18PA6NE21 464 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 FAM90A16PA6NEW6 464 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 FAM90A20PA6NIJ5 464 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 FAM90A9PA6NNJ1 464 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 FAM90A12PA8MX19 464 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 FAM90A5PA8MXJ8 464 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 OOSP1A8MZH6 123 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 J3QR06 171 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 FAM90A15PP0C7V4 464 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 FAM90A13PP0C7W8 464 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 FAM90A14PP0C7W9 464 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 FAM90A24PP0C7X0 464 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 FAM106CPP0CH98 169 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 DBTP11182 482 aaKnown RBP9.22□□□□□ -0.93
USP3-214ENST00000559718 HOXD3P31249 432 aaPredicted RBP9.22□□□□□ -0.93
USP3-214ENST00000559718 MNDAP41218 407 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 MTNR1BP49286 362 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 ALDH3A2P51648 485 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 PIGYQ3MUY2 71 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 ELP2Q6IA86 826 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 CCDC144NLQ6NUI1 221 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 ETV3LQ6ZN32 361 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 C18orf65Q6ZTR6 163 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 SATL1Q86VE3 508 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 SYS1Q8N2H4 156 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 CBR4Q8N4T8 237 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 DRAM1Q8N682 238 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 CNIH3Q8TBE1 160 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 PLPPR1Q8TBJ4 325 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 MRGPRDQ8TDS7 321 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 RCC1LQ96I51 464 aaKnown RBP9.22□□□□□ -0.93
USP3-214ENST00000559718 NOL4LQ96MY1 436 aaPredicted RBP9.22□□□□□ -0.93
USP3-214ENST00000559718 IDI2-AS1Q9NZ38 188 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.22□□□□□ -0.93
USP3-214ENST00000559718 DHDHQ9UQ10 334 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 PSG11Q9UQ72 335 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 MOB4Q9Y3A3 225 aa9.22□□□□□ -0.93
USP3-214ENST00000559718 ORC6Q9Y5N6 252 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms