RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 CLEC18BQ6UXF7 455 aa12.34□□□□□ -0.43
SPG11-210ENST00000558319 ANKRD33Q7Z3H0 272 aa12.34□□□□□ -0.43
SPG11-210ENST00000558319 V9GYH0 126 aa12.34□□□□□ -0.43
SPG11-210ENST00000558319 K7EQS6 105 aa12.34□□□□□ -0.43
SPG11-210ENST00000558319 FAM157CP0CG43 387 aa12.34□□□□□ -0.43
SPG11-210ENST00000558319 ZNF738Q8NE65 137 aa12.34□□□□□ -0.43
SPG11-210ENST00000558319 CT55Q8WUE5 264 aa12.34□□□□□ -0.43
SPG11-210ENST00000558319 GABRG3Q99928 467 aa12.34□□□□□ -0.43
SPG11-210ENST00000558319 ZNF256Q9Y2P7 627 aaPredicted RBP12.34□□□□□ -0.43
SPG11-210ENST00000558319 MS4A18H0YCH9 400 aa12.34□□□□□ -0.43
SPG11-210ENST00000558319 EPPINO95925 133 aa12.34□□□□□ -0.43
SPG11-210ENST00000558319 TMIGD3P0DMS9 266 aaPredicted RBP12.34□□□□□ -0.43
SPG11-210ENST00000558319 CCL4P13236 92 aa12.34□□□□□ -0.43
SPG11-210ENST00000558319 OTX1P32242 354 aaPredicted RBP12.34□□□□□ -0.43
SPG11-210ENST00000558319 MS4A18Q3C1V0 323 aa12.34□□□□□ -0.43
SPG11-210ENST00000558319 OR1K1Q8NGR3 316 aa12.34□□□□□ -0.43
SPG11-210ENST00000558319 RSG1Q9BU20 258 aa12.34□□□□□ -0.43
SPG11-210ENST00000558319 MRPS18BQ9Y676 258 aaKnown RBP12.34□□□□□ -0.43
SPG11-210ENST00000558319 K7ESF4 209 aa12.34□□□□□ -0.43
SPG11-210ENST00000558319 KLK8O60259 260 aa12.34□□□□□ -0.43
SPG11-210ENST00000558319 FGF9P31371 208 aaPredicted RBP12.34□□□□□ -0.43
SPG11-210ENST00000558319 ECSCRQ19T08 205 aa12.34□□□□□ -0.43
SPG11-210ENST00000558319 MYOZ3Q8TDC0 251 aa12.34□□□□□ -0.43
SPG11-210ENST00000558319 ZG16BQ96DA0 208 aa12.34□□□□□ -0.43
SPG11-210ENST00000558319 PIK3IP1Q96FE7 263 aa12.34□□□□□ -0.43
SPG11-210ENST00000558319 RBM38Q9H0Z9 239 aaKnown RBP12.34□□□□□ -0.43
SPG11-210ENST00000558319 SIGLEC7Q9Y286 467 aa12.34□□□□□ -0.43
SPG11-210ENST00000558319 KDM3BQ7LBC6 1761 aa12.34□□□□□ -0.43
SPG11-210ENST00000558319 IGKV3D-11A0A0A0MRZ8 115 aa12.34□□□□□ -0.43
SPG11-210ENST00000558319 A0A1B0GV90 55 aa12.34□□□□□ -0.43
SPG11-210ENST00000558319 IGKV3-11P04433 115 aa12.34□□□□□ -0.43
SPG11-210ENST00000558319 DPTQ07507 201 aa12.34□□□□□ -0.43
SPG11-210ENST00000558319 SH2D5Q6ZV89 423 aa12.34□□□□□ -0.43
SPG11-210ENST00000558319 SPTY2D1-AS1A0A0U1RR47 76 aa12.33□□□□□ -0.44
SPG11-210ENST00000558319 OR1N2Q8NGR9 330 aa12.33□□□□□ -0.44
SPG11-210ENST00000558319 HSPB9Q9BQS6 159 aa12.33□□□□□ -0.44
SPG11-210ENST00000558319 VAX2Q9UIW0 290 aa12.33□□□□□ -0.44
SPG11-210ENST00000558319 EXOGQ9Y2C4 368 aaKnown RBP12.33□□□□□ -0.44
SPG11-210ENST00000558319 CTSVO60911 334 aa12.33□□□□□ -0.44
SPG11-210ENST00000558319 COL8A1P27658 744 aa12.33□□□□□ -0.44
SPG11-210ENST00000558319 RPL30P62888 115 aaKnown RBP12.33□□□□□ -0.44
SPG11-210ENST00000558319 Q5PR19 223 aa12.33□□□□□ -0.44
SPG11-210ENST00000558319 PP6455Q8WZ26 134 aa12.33□□□□□ -0.44
SPG11-210ENST00000558319 DOK1Q99704 481 aa12.33□□□□□ -0.44
SPG11-210ENST00000558319 PCGF1Q9BSM1 259 aa12.33□□□□□ -0.44
SPG11-210ENST00000558319 PECRQ9BY49 303 aa12.33□□□□□ -0.44
SPG11-210ENST00000558319 A0A0A6YYD5 115 aa12.33□□□□□ -0.44
SPG11-210ENST00000558319 CCR5P51681 352 aa12.33□□□□□ -0.44
SPG11-210ENST00000558319 AESQ08117 197 aa12.33□□□□□ -0.44
SPG11-210ENST00000558319 C19orf48Q6RUI8 117 aa12.33□□□□□ -0.44
SPG11-210ENST00000558319 WNT5AP41221 380 aa12.33□□□□□ -0.44
SPG11-210ENST00000558319 DNLZQ5SXM8 178 aa12.33□□□□□ -0.44
SPG11-210ENST00000558319 LHFPL5Q8TAF8 219 aa12.33□□□□□ -0.44
SPG11-210ENST00000558319 RAB24Q969Q5 203 aa12.33□□□□□ -0.44
SPG11-210ENST00000558319 FAM131CQ96AQ9 280 aa12.33□□□□□ -0.44
SPG11-210ENST00000558319 IL20Q9NYY1 176 aa12.33□□□□□ -0.44
SPG11-210ENST00000558319 IL36GQ9NZH8 169 aa12.33□□□□□ -0.44
SPG11-210ENST00000558319 GSTZ1O43708 216 aaPredicted RBP12.33□□□□□ -0.44
SPG11-210ENST00000558319 ITGBL1O95965 494 aaPredicted RBP12.33□□□□□ -0.44
SPG11-210ENST00000558319 GUCA2BQ16661 112 aa12.33□□□□□ -0.44
SPG11-210ENST00000558319 SPEM1Q8N4L4 309 aa12.33□□□□□ -0.44
SPG11-210ENST00000558319 OR10AC1Q8NH08 325 aa12.33□□□□□ -0.44
SPG11-210ENST00000558319 ANGPTL4Q9BY76 406 aa12.33□□□□□ -0.44
SPG11-210ENST00000558319 RAE1P78406 368 aaKnown RBP12.32□□□□□ -0.44
SPG11-210ENST00000558319 DPH3Q96FX2 82 aa12.32□□□□□ -0.44
SPG11-210ENST00000558319 MS4A3Q96HJ5 214 aa12.32□□□□□ -0.44
SPG11-210ENST00000558319 ST8SIA5O15466 376 aa12.32□□□□□ -0.44
SPG11-210ENST00000558319 UBALD2Q8IYN6 164 aa12.32□□□□□ -0.44
SPG11-210ENST00000558319 OR4D9Q8NGE8 314 aa12.32□□□□□ -0.44
SPG11-210ENST00000558319 ZNF502Q8TBZ5 544 aa12.32□□□□□ -0.44
SPG11-210ENST00000558319 MYOZ1Q9NP98 299 aaPredicted RBP12.32□□□□□ -0.44
SPG11-210ENST00000558319 MTCH2Q9Y6C9 303 aa12.32□□□□□ -0.44
SPG11-210ENST00000558319 SCN3AQ9NY46 2000 aa12.32□□□□□ -0.44
SPG11-210ENST00000558319 CT62P0C5K7 136 aa12.32□□□□□ -0.44
SPG11-210ENST00000558319 PNLIPRP2P54317 469 aa12.32□□□□□ -0.44
SPG11-210ENST00000558319 TTC32Q5I0X7 151 aa12.32□□□□□ -0.44
SPG11-210ENST00000558319 ACER2Q5QJU3 275 aa12.32□□□□□ -0.44
SPG11-210ENST00000558319 WFIKKN1Q96NZ8 548 aa12.32□□□□□ -0.44
SPG11-210ENST00000558319 RTN4RQ9BZR6 473 aa12.32□□□□□ -0.44
SPG11-210ENST00000558319 WDR13Q9H1Z4 485 aa12.32□□□□□ -0.44
SPG11-210ENST00000558319 SLC17A5Q9NRA2 495 aa12.32□□□□□ -0.44
SPG11-210ENST00000558319 IGHV3OR16-10A0A075B7F0 116 aa12.32□□□□□ -0.44
SPG11-210ENST00000558319 DEDDO75618 318 aa12.32□□□□□ -0.44
SPG11-210ENST00000558319 MOGAT3Q86VF5 341 aa12.32□□□□□ -0.44
SPG11-210ENST00000558319 TSPAN32Q96QS1 320 aa12.32□□□□□ -0.44
SPG11-210ENST00000558319 CDX2Q99626 313 aaPredicted RBP12.32□□□□□ -0.44
SPG11-210ENST00000558319 LINC00862A6NCI5 91 aa12.32□□□□□ -0.44
SPG11-210ENST00000558319 CRYABP02511 175 aaKnown RBP12.32□□□□□ -0.44
SPG11-210ENST00000558319 TRGC2P03986 189 aa12.32□□□□□ -0.44
SPG11-210ENST00000558319 ADIPOQQ15848 244 aa12.32□□□□□ -0.44
SPG11-210ENST00000558319 HIKESHIQ53FT3 197 aa12.32□□□□□ -0.44
SPG11-210ENST00000558319 CA10Q9NS85 328 aa12.32□□□□□ -0.44
SPG11-210ENST00000558319 CACFD1Q9UGQ2 172 aa12.32□□□□□ -0.44
SPG11-210ENST00000558319 RABAC1Q9UI14 185 aa12.32□□□□□ -0.44
SPG11-210ENST00000558319 P2RY1P47900 373 aa12.31□□□□□ -0.44
SPG11-210ENST00000558319 MRPL24Q96A35 216 aaKnown RBP12.31□□□□□ -0.44
SPG11-210ENST00000558319 ZPBPQ9BS86 351 aa12.31□□□□□ -0.44
SPG11-210ENST00000558319 SOCS1O15524 211 aa12.31□□□□□ -0.44
SPG11-210ENST00000558319 GP1BAP07359 652 aa12.31□□□□□ -0.44
SPG11-210ENST00000558319 SOD3P08294 240 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms