RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 ADCY10Q96PN6 1610 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 MAP3K4Q9Y6R4 1608 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 GCC2Q8IWJ2 1684 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 LOC100130705A0A1B0GUX0 176 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 TVP23AA6NH52 213 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 SLC22A20A6NK97 555 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 FAM159BA6NKW6 160 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 SEC14L6B5MCN3 397 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 PPP5D1E7EU14 171 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 TRAPPC2LH3BP13 241 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 K7EN84 100 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 KCNK1O00180 336 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 TCF21O43680 179 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 AIREO43918 545 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 HPGDSO60760 199 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 SLC19A2O60779 497 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 RDH16O75452 317 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 WBP4O75554 376 aaKnown RBP1.25□□□□□ -2.21
HIF1A-212ENST00000557538 RCBTB2O95199 551 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 TNFAIP8O95379 198 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 HLA-HP01893 362 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 CA3P07451 260 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 CSF3P09919 207 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 ESDP10768 282 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 PGAM2P15259 253 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 ADCYAP1P18509 176 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 AK4P27144 223 aaPredicted RBP1.25□□□□□ -2.21
HIF1A-212ENST00000557538 DNASE1L1P49184 302 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 PLCXD2Q0VAA5 305 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF846Q147U1 533 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 SURF2Q15527 256 aaPredicted RBP1.25□□□□□ -2.21
HIF1A-212ENST00000557538 SLC25A52Q3SY17 297 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 EIPR1Q53HC9 387 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 SAMD4BQ5PRF9 694 aaKnown RBP1.25□□□□□ -2.21
HIF1A-212ENST00000557538 CASC10Q5T4H9 136 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF57Q68EA5 555 aaPredicted RBP1.25□□□□□ -2.21
HIF1A-212ENST00000557538 UQCC3Q6UW78 93 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 WDR82Q6UXN9 313 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 ACOT7LQ6ZUV0 252 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 PRSS48Q7RTY5 328 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 FAM19A5Q7Z5A7 132 aaPredicted RBP1.25□□□□□ -2.21
HIF1A-212ENST00000557538 NIT1Q86X76 327 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 C1orf158Q8N1D5 194 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 MMGT1Q8N4V1 131 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 TMEM86BQ8N661 226 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 KIR3DL3Q8N743 410 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 KLHL30-AS1Q8NEE0 82 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 SDR9C7Q8NEX9 313 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 OR1L4Q8NGR5 311 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 ZNRF2Q8NHG8 242 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 RXFP4Q8TDU9 374 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 PHF10Q8WUB8 498 aaKnown RBP1.25□□□□□ -2.21
HIF1A-212ENST00000557538 SLC7A6Q92536 515 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 PRG4Q92954 1404 aaPredicted RBP1.25□□□□□ -2.21
HIF1A-212ENST00000557538 GALMQ96C23 342 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 SMIM19Q96E16 107 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 NUS1Q96E22 293 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 PELI1Q96FA3 418 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 IL4I1Q96RQ9 567 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 CLMPQ9H6B4 373 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 PXMP2Q9NR77 195 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 SLC17A5Q9NRA2 495 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 GPATCH2LQ9NWQ4 482 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 SS18L2Q9UHA2 77 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 IKZF2Q9UKS7 526 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 RAB22AQ9UL26 194 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 MMP17Q9ULZ9 603 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 SCML2Q9UQR0 700 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 CARHSP1Q9Y2V2 147 aaKnown RBP1.25□□□□□ -2.21
HIF1A-212ENST00000557538 OR10H1Q9Y4A9 318 aa1.25□□□□□ -2.21
HIF1A-212ENST00000557538 XRN1Q8IZH2 1706 aaKnown RBP1.24□□□□□ -2.21
HIF1A-212ENST00000557538 TIAM1Q13009 1591 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 ALPK3Q96L96 1907 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 IGLV8-61A0A075B6I0 122 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 KIR2DS1A0A191URI9 304 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 TMEM269A0A1B0GVZ9 245 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 A0A1W2PRE2 83 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 TMEM189A5PLL7 270 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 CENPXA8MT69 81 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 CLDN25C9JDP6 229 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 FTCDNL1E5RQL4 147 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 F5H768 121 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 H7C2Y5 167 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 I3L4J1 428 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 M0R143 59 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 SOX15O60248 233 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 OR2B3O76000 313 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 PDYNP01213 254 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 OR5H8P0DN80 308 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 ATP1B2P14415 290 aaPredicted RBP1.24□□□□□ -2.21
HIF1A-212ENST00000557538 GCLMP48507 274 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 TAF6P49848 677 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 PPP3R1P63098 170 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 EGFEM1PQ0D2K5 195 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 BIKQ13323 160 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 KIR2DS1Q14954 304 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 PAFAH1B3Q15102 231 aaKnown RBP1.24□□□□□ -2.21
HIF1A-212ENST00000557538 UBE2V2Q15819 145 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 TAF9Q16594 264 aa1.24□□□□□ -2.21
HIF1A-212ENST00000557538 HENMT1Q5T8I9 393 aaKnown RBP1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms