RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 PITPNAQ00169 270 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.09□□□□□ -1.75
ATXN3-247ENST00000557311 SRSF4Q08170 494 aaKnown RBP4.09□□□□□ -1.75
ATXN3-247ENST00000557311 BST1Q10588 318 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 PDE7AQ13946 482 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 GAMTQ14353 236 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 TBCEQ15813 527 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-247ENST00000557311 TAF9Q16594 264 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 MEP1BQ16820 701 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 IFI44LQ53G44 452 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 AGKQ53H12 422 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 PYY3Q5JQD4 70 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 NHLRC3Q5JS37 347 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 GCNT6Q5T4J0 391 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 SAMD13Q5VXD3 122 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 KDM4DQ6B0I6 523 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 XAF1Q6GPH4 301 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 MAVSQ7Z434 540 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 CCDC190Q86UF4 302 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 MOGAT3Q86VF5 341 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 HS3ST5Q8IZT8 346 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 ACBD7Q8N6N7 88 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 KIR3DL3Q8N743 410 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 TMEM99Q8N816 258 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 CCDC71LQ8N9Z2 235 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 OR56B1Q8NGI3 324 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 OR4F5Q8NH21 305 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 OR5P2Q8WZ92 322 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 RAB8BQ92930 207 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 MOAP1Q96BY2 351 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 KTI12Q96EK9 354 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-247ENST00000557311 DNAJA3Q96EY1 480 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 TIMD4Q96H15 378 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 PGAM5Q96HS1 289 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 C4orf36Q96KX1 117 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 CXorf58Q96LI9 332 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 C1orf147Q96MC9 270 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-247ENST00000557311 NEDD4LQ96PU5 975 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 OR2M2Q96R28 347 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 OR8B4Q96RC9 309 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 SLC30A2Q9BRI3 323 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 LINC00470Q9BZP3 86 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 CHST5Q9GZS9 411 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 MED28Q9H204 178 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 TMEM38AQ9H6F2 299 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 HEXA-AS1Q9H8Q6 139 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 NOX3Q9HBY0 568 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 RASL12Q9NYN1 266 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 ANGPT4Q9Y264 503 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 SLC35A3Q9Y2D2 325 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 ZFP30Q9Y2G7 519 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 TMED7Q9Y3B3 224 aa4.09□□□□□ -1.75
ATXN3-247ENST00000557311 PRKDCP78527 4128 aaKnown RBP4.08□□□□□ -1.76
ATXN3-247ENST00000557311 TMEM218A2RU14 115 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 TRAPPC13A5PLN9 417 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 LIPT2A6NK58 231 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 AQP7P3A6NL99 342 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 CLDN24A6NM45 220 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 EFCAB9A8MZ26 197 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 F6UZH7 168 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 K7EQM0 130 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 FABP7O15540 132 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 FOXH1O75593 365 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 ADAP1O75689 374 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 ZNF432O94892 652 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 UBCP0CG48 685 aaKnown RBP4.08□□□□□ -1.76
ATXN3-247ENST00000557311 BCKDHAP12694 445 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 ZNF35P13682 527 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 TBPP20226 339 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 OMGP23515 440 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 CPT2P23786 658 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 LMO1P25800 156 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 PPIFP30405 207 aaKnown RBP4.08□□□□□ -1.76
ATXN3-247ENST00000557311 RPL3P39023 403 aaKnown RBP4.08□□□□□ -1.76
ATXN3-247ENST00000557311 CDX1P47902 265 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-247ENST00000557311 RFX2P48378 723 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 IDH2P48735 452 aaKnown RBP4.08□□□□□ -1.76
ATXN3-247ENST00000557311 MMP15P51511 669 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 POLR2HP52434 150 aaKnown RBP4.08□□□□□ -1.76
ATXN3-247ENST00000557311 FOXA1P55317 472 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 OR2B8PP59922 312 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 RPS20P60866 119 aaKnown RBP4.08□□□□□ -1.76
ATXN3-247ENST00000557311 NCS1P62166 190 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 LSM6P62312 80 aaKnown RBP4.08□□□□□ -1.76
ATXN3-247ENST00000557311 HERV-K104P63124 156 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 EIF5AP63241 154 aaKnown RBP4.08□□□□□ -1.76
ATXN3-247ENST00000557311 CDK6Q00534 326 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 EMX1Q04741 257 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-247ENST00000557311 CEACAM7Q14002 265 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 IRF3Q14653 427 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 OPCMLQ14982 345 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 MAD2L1BPQ15013 274 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-247ENST00000557311 MAPK14Q16539 360 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 ARHGAP11BQ3KRB8 267 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 SLC22A6Q4U2R8 563 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 ARFGEF3Q5TH69 2177 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 OLFML2AQ68BL7 652 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 WBP2NLQ6ICG8 309 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 ASPHD2Q6ICH7 369 aa4.08□□□□□ -1.76
ATXN3-247ENST00000557311 REEP3Q6NUK4 255 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms