RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 FUT6P51993 359 aa9.81□□□□□ -0.84
SRP54-213ENST00000556994 TMEM42Q69YG0 159 aa9.81□□□□□ -0.84
SRP54-213ENST00000556994 TMEM211Q6ICI0 200 aa9.81□□□□□ -0.84
SRP54-213ENST00000556994 GPR137CQ8N3F9 429 aa9.81□□□□□ -0.84
SRP54-213ENST00000556994 CCDC54Q8NEL0 328 aa9.81□□□□□ -0.84
SRP54-213ENST00000556994 PFDN5Q99471 154 aa9.81□□□□□ -0.84
SRP54-213ENST00000556994 TMEM38BQ9NVV0 291 aa9.81□□□□□ -0.84
SRP54-213ENST00000556994 IL36RNQ9UBH0 155 aa9.81□□□□□ -0.84
SRP54-213ENST00000556994 WSB1Q9Y6I7 421 aa9.81□□□□□ -0.84
SRP54-213ENST00000556994 A0A087WZY1 265 aa9.8□□□□□ -0.84
SRP54-213ENST00000556994 C3orf80F5H4A9 247 aa9.8□□□□□ -0.84
SRP54-213ENST00000556994 RPS18P62269 152 aaKnown RBP9.8□□□□□ -0.84
SRP54-213ENST00000556994 RPL23AP62750 156 aaKnown RBP9.8□□□□□ -0.84
SRP54-213ENST00000556994 MRPL14Q6P1L8 145 aaKnown RBP9.8□□□□□ -0.84
SRP54-213ENST00000556994 IL22RA1Q8N6P7 574 aa9.8□□□□□ -0.84
SRP54-213ENST00000556994 ZNF383Q8NA42 475 aa9.8□□□□□ -0.84
SRP54-213ENST00000556994 OR10D4PQ8NGN7 298 aa9.8□□□□□ -0.84
SRP54-213ENST00000556994 EXTL1Q92935 676 aa9.8□□□□□ -0.84
SRP54-213ENST00000556994 CPNE4Q96A23 557 aaPredicted RBP9.8□□□□□ -0.84
SRP54-213ENST00000556994 CCL28Q9NRJ3 127 aa9.8□□□□□ -0.84
SRP54-213ENST00000556994 KIAA1456Q9P272 454 aa9.8□□□□□ -0.84
SRP54-213ENST00000556994 hCG_38984A0A1B0GV85 526 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 OR6C6A6NF89 314 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 TOX3O15405 576 aaPredicted RBP9.79□□□□□ -0.84
SRP54-213ENST00000556994 HIST1H2BKO60814 126 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 HIST1H2BJP06899 126 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 CST2P09228 141 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 HIST1H2BOP23527 126 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 S100A2P29034 98 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 HIST1H2BBP33778 126 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 HIST1H2BDP58876 126 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 HIST1H2BCP62807 126 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 HIST2H2BEQ16778 126 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 IZUMO4Q1ZYL8 232 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 CEACAM16Q2WEN9 425 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.79□□□□□ -0.84
SRP54-213ENST00000556994 AKR1C8PQ5T2L2 129 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 SLC23A3Q6PIS1 610 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 CMTM1Q8IZ96 169 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 ZNF610Q8N9Z0 462 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 HIST1H2BHQ93079 126 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 TVP23CQ96ET8 276 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 TMEM56Q96MV1 263 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 SIGLEC12Q96PQ1 595 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 HIST1H2BNQ99877 126 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 HIST1H2BMQ99879 126 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 SLC25A31Q9H0C2 315 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 WNT5BQ9H1J7 359 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 CALHM2Q9HA72 323 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 GAR1Q9NY12 217 aaKnown RBP9.79□□□□□ -0.84
SRP54-213ENST00000556994 TMEM56-RWDD3S4R434 201 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 A0A0G2JMM0 328 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 A0A1W2PPB8 328 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 A0A1W2PRS3 328 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 KIR3DP1A8MWS1 328 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 SLC34A2O95436 690 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 EDN3P14138 238 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 BCL3P20749 454 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 CCNOP22674 350 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 RAC1P63000 192 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 HERPUD1Q15011 391 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 EXT1Q16394 746 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 C17orf78Q8N4C9 275 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 CLDND2Q8NHS1 167 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 INTS12Q96CB8 462 aaKnown RBP9.79□□□□□ -0.84
SRP54-213ENST00000556994 NIPSNAP3BQ9BS92 247 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 GPR61Q9BZJ8 451 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 OR2H1Q9GZK4 316 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 SMDT1Q9H4I9 107 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 CRIM1Q9NZV1 1036 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 PTRH2Q9Y3E5 179 aaKnown RBP9.79□□□□□ -0.84
SRP54-213ENST00000556994 DMRT1Q9Y5R6 373 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 CACNA1EQ15878 2313 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 PI4KAP42356 2102 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 KIAA1549Q9HCM3 1950 aa9.79□□□□□ -0.84
SRP54-213ENST00000556994 IGHV1-45A0A0A0MS14 117 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 SLC22A20A6NK97 555 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 WRBO00258 174 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 CXCL13O43927 109 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 HLA-HP01893 362 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 TK1P04183 234 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 SOD3P08294 240 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 CCL2P13500 99 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 IGFBP4P22692 258 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 C4orf17Q53FE4 359 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 AAED1Q7RTV5 226 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 THNSL2Q86YJ6 484 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 PLPPR1Q8TBJ4 325 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 NEK7Q8TDX7 302 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 FOXB1Q99853 325 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 UNKLQ9H9P5 680 aaKnown RBP9.78□□□□□ -0.84
SRP54-213ENST00000556994 GNG13Q9P2W3 67 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 LY6G6EA0A0G2JKS1 128 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 A0A0G2JRQ6 117 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 ZNF816-ZNF321PA0A0X1KG74 233 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 ZNF732B4DXR9 585 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 RPL36A-HNRNPH2H7BZ11 118 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 UMODP07911 640 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 SSR4P51571 173 aa9.78□□□□□ -0.84
SRP54-213ENST00000556994 PAX9P55771 341 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms