RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 OR2H2O95918 312 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 CALCBP10092 127 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 HTR1DP28221 377 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 KIR2DS4P43632 304 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 RSU1Q15404 277 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 MINOS1Q5TGZ0 78 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 DHRSXQ8N5I4 330 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 C11orf42Q8N5U0 333 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 OR11H6Q8NGC7 330 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 OR4D6Q8NGJ1 314 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 ZNF596Q8TC21 504 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 AKR1E2Q96JD6 320 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 NKX3-1Q99801 234 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-222ENST00000556768 CLEC7AQ9BXN2 247 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 FAM192AQ9GZU8 254 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 RANBP3Q9H6Z4 567 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-222ENST00000556768 BABAM2Q9NXR7 383 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 OR6C3Q9NZP0 311 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 EXOSC1Q9Y3B2 195 aaKnown RBP5.95□□□□□ -1.46
SCFD1-222ENST00000556768 SESN1Q9Y6P5 492 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 MINOS1-NBL1R4GNA1 71 aa5.95□□□□□ -1.46
SCFD1-222ENST00000556768 MEX3AA1L020 520 aaKnown RBP5.94□□□□□ -1.46
SCFD1-222ENST00000556768 FAM90A8PA6NJQ4 464 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 F2RL2O00254 374 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 TOR1AO14656 332 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 PSPNO60542 156 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 KDM4BO94953 1096 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 ALDOBP05062 364 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 LMO1P25800 156 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 C21orf33P30042 268 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-222ENST00000556768 BRS3P32247 399 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 CEACAM3P40198 252 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 SOX2P48431 317 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 PRRX1P54821 245 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 PROK1P58294 105 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 SLC34A1Q06495 639 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 AESQ08117 197 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 SRSF4Q08170 494 aaKnown RBP5.94□□□□□ -1.46
SCFD1-222ENST00000556768 C2orf68Q2NKX9 166 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 KRBOX4Q5JUW0 171 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 ZNF626Q68DY1 528 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 ASPHD2Q6ICH7 369 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 HCP5Q6MZN7 132 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 RTN4RL2Q86UN3 420 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 ABHD12Q8N2K0 398 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 TPRX1Q8N7U7 411 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 OR52N4Q8NGI2 321 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 OR10AC1Q8NH08 325 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 C17orf50Q8WW18 174 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 TMEM106AQ96A25 262 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 TMEM80Q96HE8 168 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 NR1H4Q96RI1 486 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-222ENST00000556768 TMEM133Q9H2Q1 129 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 MMP27Q9H306 513 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 FGF20Q9NP95 211 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-222ENST00000556768 TMEM138Q9NPI0 162 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 TAS2R3Q9NYW6 316 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 HILPDAQ9Y5L2 63 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 HSPE1-MOB4S4R3N1 261 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 VWFP04275 2813 aa5.94□□□□□ -1.46
SCFD1-222ENST00000556768 IGHV2-26A0A0B4J1V2 119 aa5.93□□□□□ -1.46
SCFD1-222ENST00000556768 A0A0G2JK05 382 aa5.93□□□□□ -1.46
SCFD1-222ENST00000556768 EFCAB10A6NFE3 127 aa5.93□□□□□ -1.46
SCFD1-222ENST00000556768 E9PI62 339 aa5.93□□□□□ -1.46
SCFD1-222ENST00000556768 H0YJX3 145 aa5.93□□□□□ -1.46
SCFD1-222ENST00000556768 TMEM127O75204 238 aa5.93□□□□□ -1.46
SCFD1-222ENST00000556768 ZNF780AO75290 641 aaPredicted RBP5.93□□□□□ -1.46
SCFD1-222ENST00000556768 CSN2P05814 226 aa5.93□□□□□ -1.46
SCFD1-222ENST00000556768 LIMS3P0CW19 117 aa5.93□□□□□ -1.46
SCFD1-222ENST00000556768 LIMS4P0CW20 117 aa5.93□□□□□ -1.46
SCFD1-222ENST00000556768 CDK2P24941 298 aa5.93□□□□□ -1.46
SCFD1-222ENST00000556768 PTGFRP43088 359 aa5.93□□□□□ -1.46
SCFD1-222ENST00000556768 GTF2A1P52655 376 aaPredicted RBP5.93□□□□□ -1.46
SCFD1-222ENST00000556768 DLX6P56179 175 aa5.93□□□□□ -1.46
SCFD1-222ENST00000556768 SMN1Q16637 294 aaKnown RBP5.93□□□□□ -1.46
SCFD1-222ENST00000556768 PLA1AQ53H76 456 aa5.93□□□□□ -1.46
SCFD1-222ENST00000556768 ZNF691Q5VV52 312 aa5.93□□□□□ -1.46
SCFD1-222ENST00000556768 HEPN1Q6WQI6 88 aa5.93□□□□□ -1.46
SCFD1-222ENST00000556768 LHFPL4Q7Z7J7 247 aa5.93□□□□□ -1.46
SCFD1-222ENST00000556768 C8orf59Q8N0T1 100 aaPredicted RBP5.93□□□□□ -1.46
SCFD1-222ENST00000556768 PXT1Q8NFP0 134 aa5.93□□□□□ -1.46
SCFD1-222ENST00000556768 OR4S1Q8NGB4 309 aa5.93□□□□□ -1.46
SCFD1-222ENST00000556768 TNFAIP8L1Q8WVP5 186 aa5.93□□□□□ -1.46
SCFD1-222ENST00000556768 RAB24Q969Q5 203 aa5.93□□□□□ -1.46
SCFD1-222ENST00000556768 AJUBAQ96IF1 538 aa5.93□□□□□ -1.46
SCFD1-222ENST00000556768 PRSS22Q9GZN4 317 aa5.93□□□□□ -1.46
SCFD1-222ENST00000556768 ING3Q9NXR8 418 aa5.93□□□□□ -1.46
SCFD1-222ENST00000556768 DPM3Q9P2X0 92 aa5.93□□□□□ -1.46
SCFD1-222ENST00000556768 IL36RNQ9UBH0 155 aa5.93□□□□□ -1.46
SCFD1-222ENST00000556768 DIMT1Q9UNQ2 313 aaKnown RBP5.93□□□□□ -1.46
SCFD1-222ENST00000556768 IGKV1-12A0A0C4DH73 117 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 ODAMA1E959 279 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 ODF3BA8MYP8 253 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 LEUTXA8MZ59 168 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 WBP4O75554 376 aaKnown RBP5.92□□□□□ -1.46
SCFD1-222ENST00000556768 IGKV1D-12P01611 117 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 ZNF93P35789 620 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-222ENST00000556768 MNDAP41218 407 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 OR3A1P47881 315 aa5.92□□□□□ -1.46
SCFD1-222ENST00000556768 KCNJ3P48549 501 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms