RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 OR4P4Q8NGL7 312 aa7.97□□□□□ -1.13
SCFD1-220ENST00000556486 TMEM163Q8TC26 289 aa7.97□□□□□ -1.13
SCFD1-220ENST00000556486 PP6455Q8WZ26 134 aa7.97□□□□□ -1.13
SCFD1-220ENST00000556486 MYDGFQ969H8 173 aa7.97□□□□□ -1.13
SCFD1-220ENST00000556486 KRTAP4-12Q9BQ66 201 aa7.97□□□□□ -1.13
SCFD1-220ENST00000556486 CADM1Q9BY67 442 aaKnown RBP7.97□□□□□ -1.13
SCFD1-220ENST00000556486 TTTY10Q9BZA0 68 aa7.97□□□□□ -1.13
SCFD1-220ENST00000556486 TMEM133Q9H2Q1 129 aa7.97□□□□□ -1.13
SCFD1-220ENST00000556486 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.97□□□□□ -1.13
SCFD1-220ENST00000556486 POMPQ9Y244 141 aa7.97□□□□□ -1.13
SCFD1-220ENST00000556486 LYSTQ99698 3801 aa7.97□□□□□ -1.13
SCFD1-220ENST00000556486 DNAH1Q9P2D7 4330 aa7.96□□□□□ -1.13
SCFD1-220ENST00000556486 TRBV2A0A0J9YWF9 115 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 A6NIN4 97 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 SH2D7A6NKC9 451 aaPredicted RBP7.96□□□□□ -1.14
SCFD1-220ENST00000556486 SAC3D1A6NKF1 404 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 MGST3O14880 152 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 MAGEB4O15481 346 aaPredicted RBP7.96□□□□□ -1.14
SCFD1-220ENST00000556486 SYT7O43581 403 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 HAND1O96004 215 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 IGLV1-47P01700 117 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 KRT8P05787 483 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 OR2T7P0C7T2 308 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 HTR1DP28221 377 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 EPHA2P29317 976 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 CDC42P60953 191 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 BDH1Q02338 343 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 ZNF91Q05481 1191 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 DNAL1Q4LDG9 190 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 KDM4DQ6B0I6 523 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 PLEKHG7Q6ZR37 379 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 SSX6Q7RTT6 188 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 BCDIN3DQ7Z5W3 292 aaKnown RBP7.96□□□□□ -1.14
SCFD1-220ENST00000556486 SPATA24Q86W54 205 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 TCEANCQ8N8B7 351 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 OR52N4Q8NGI2 321 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 DPF1Q92782 380 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 AKR1E2Q96JD6 320 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 PRR25Q96S07 402 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 CLEC7AQ9BXN2 247 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 PLEKHA1Q9HB21 404 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 LIN7CQ9NUP9 197 aaKnown RBP7.96□□□□□ -1.14
SCFD1-220ENST00000556486 WARS2Q9UGM6 360 aaKnown RBP7.96□□□□□ -1.14
SCFD1-220ENST00000556486 ENOPH1Q9UHY7 261 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 UBE2J1Q9Y385 318 aaPredicted RBP7.96□□□□□ -1.14
SCFD1-220ENST00000556486 HUWE1Q7Z6Z7 4374 aaKnown RBP7.96□□□□□ -1.14
SCFD1-220ENST00000556486 DNAH7Q8WXX0 4024 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 HYDINQ4G0P3 5121 aa7.96□□□□□ -1.14
SCFD1-220ENST00000556486 FAM230AA0A1W2PPH8 454 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 METTL15A6NJ78 407 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 DUS4LO95620 317 aaKnown RBP7.95□□□□□ -1.14
SCFD1-220ENST00000556486 SERPINA3P01011 423 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 CSN2P05814 226 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 UBCP0CG48 685 aaKnown RBP7.95□□□□□ -1.14
SCFD1-220ENST00000556486 LMO1P25800 156 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 CD34P28906 385 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 HTR1FP30939 366 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 RBP2P50120 134 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 P2RX3P56373 397 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 DYNC1I2Q13409 638 aaKnown RBP7.95□□□□□ -1.14
SCFD1-220ENST00000556486 TMED1Q13445 227 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 GRK1Q15835 563 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 ZFAND6Q6FIF0 208 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 OR52W1Q6IF63 320 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 HEPN1Q6WQI6 88 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 SLC25A26Q70HW3 274 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 UTS2BQ765I0 119 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 CENPVQ7Z7K6 275 aaPredicted RBP7.95□□□□□ -1.14
SCFD1-220ENST00000556486 RTN4RL2Q86UN3 420 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 EGFL6Q8IUX8 553 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 BATF2Q8N1L9 274 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 ZNF676Q8N7Q3 588 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 MUC7Q8TAX7 377 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 TRMT10AQ8TBZ6 339 aaKnown RBP7.95□□□□□ -1.14
SCFD1-220ENST00000556486 CORO2AQ92828 525 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 SLAMF9Q96A28 289 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 BORCS8Q96FH0 119 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 ZNF649Q9BS31 505 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 GABARAPL1Q9H0R8 117 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 RHOFQ9HBH0 211 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 DPM3Q9P2X0 92 aa7.95□□□□□ -1.14
SCFD1-220ENST00000556486 IGKV1-9A0A0C4DH69 117 aa7.94□□□□□ -1.14
SCFD1-220ENST00000556486 LCE6AA0A183 80 aa7.94□□□□□ -1.14
SCFD1-220ENST00000556486 A0A1W2PQL4 384 aaPredicted RBP7.94□□□□□ -1.14
SCFD1-220ENST00000556486 M0R129 80 aa7.94□□□□□ -1.14
SCFD1-220ENST00000556486 GYG2O15488 501 aa7.94□□□□□ -1.14
SCFD1-220ENST00000556486 ENTPD6O75354 484 aa7.94□□□□□ -1.14
SCFD1-220ENST00000556486 OR2F2O95006 317 aa7.94□□□□□ -1.14
SCFD1-220ENST00000556486 ISG15P05161 165 aa7.94□□□□□ -1.14
SCFD1-220ENST00000556486 BRS3P32247 399 aa7.94□□□□□ -1.14
SCFD1-220ENST00000556486 OR3A1P47881 315 aa7.94□□□□□ -1.14
SCFD1-220ENST00000556486 RPP30P78346 268 aaKnown RBP7.94□□□□□ -1.14
SCFD1-220ENST00000556486 SLC34A1Q06495 639 aa7.94□□□□□ -1.14
SCFD1-220ENST00000556486 EDDM3AQ14507 147 aa7.94□□□□□ -1.14
SCFD1-220ENST00000556486 ATP6AP1Q15904 470 aa7.94□□□□□ -1.14
SCFD1-220ENST00000556486 KLHL22Q53GT1 634 aa7.94□□□□□ -1.14
SCFD1-220ENST00000556486 C18orf65Q6ZTR6 163 aa7.94□□□□□ -1.14
SCFD1-220ENST00000556486 FAM58AQ8N1B3 248 aa7.94□□□□□ -1.14
SCFD1-220ENST00000556486 PRSS35Q8N3Z0 413 aa7.94□□□□□ -1.14
SCFD1-220ENST00000556486 YIPF7Q8N8F6 280 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms