RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 PNLIPRP3Q17RR3 467 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 ZNF260Q3ZCT1 412 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 TMEM69Q5SWH9 247 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 SLC35E4Q6ICL7 350 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 BRICD5Q6PL45 260 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 DUX4L9Q6RFH8 374 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-221ENST00000555773 BAIAP2L2Q6UXY1 529 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 OR6Q1Q8NGQ2 317 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 NEK7Q8TDX7 302 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 ST8SIA4Q92187 359 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 DIRAS2Q96HU8 199 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 SULT4A1Q9BR01 284 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 CHST6Q9GZX3 395 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 ETAA1Q9NY74 926 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 EXTL2Q9UBQ6 330 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 DUX4Q9UBX2 424 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 LPAR3Q9UBY5 353 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 MAP1AP78559 2803 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-221ENST00000555773 MED13LQ71F56 2210 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 SETXQ7Z333 2677 aaKnown RBP10.33□□□□□ -0.76
SHMT2-221ENST00000555773 CSMD1Q96PZ7 3565 aa10.33□□□□□ -0.76
SHMT2-221ENST00000555773 MYO9AB2RTY4 2548 aa10.33□□□□□ -0.76
SHMT2-221ENST00000555773 LOC105371242A0A075B767 164 aa10.33□□□□□ -0.76
SHMT2-221ENST00000555773 UBE2QL1A1L167 161 aa10.33□□□□□ -0.76
SHMT2-221ENST00000555773 B4DSR2 109 aa10.33□□□□□ -0.76
SHMT2-221ENST00000555773 MFNGO00587 321 aa10.33□□□□□ -0.76
SHMT2-221ENST00000555773 HSPB6O14558 160 aa10.33□□□□□ -0.76
SHMT2-221ENST00000555773 FCN3O75636 299 aa10.33□□□□□ -0.76
SHMT2-221ENST00000555773 MT-ND4P03905 459 aa10.33□□□□□ -0.76
SHMT2-221ENST00000555773 LIPFP07098 398 aa10.33□□□□□ -0.76
SHMT2-221ENST00000555773 GNB3P16520 340 aa10.33□□□□□ -0.76
SHMT2-221ENST00000555773 P2RX3P56373 397 aa10.33□□□□□ -0.76
SHMT2-221ENST00000555773 MRPS15P82914 257 aaKnown RBP10.33□□□□□ -0.76
SHMT2-221ENST00000555773 PITPNAQ00169 270 aa10.33□□□□□ -0.76
SHMT2-221ENST00000555773 AESQ08117 197 aa10.33□□□□□ -0.76
SHMT2-221ENST00000555773 KRBOX4Q5JUW0 171 aa10.33□□□□□ -0.76
SHMT2-221ENST00000555773 HACD4Q5VWC8 232 aa10.33□□□□□ -0.76
SHMT2-221ENST00000555773 RSBN1Q5VWQ0 802 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-221ENST00000555773 SPNS3Q6ZMD2 512 aa10.33□□□□□ -0.76
SHMT2-221ENST00000555773 ZNF497Q6ZNH5 498 aa10.33□□□□□ -0.76
SHMT2-221ENST00000555773 BTN2A1Q7KYR7 527 aa10.33□□□□□ -0.76
SHMT2-221ENST00000555773 LAX1Q8IWV1 398 aa10.33□□□□□ -0.76
SHMT2-221ENST00000555773 GAPTQ8N292 157 aa10.33□□□□□ -0.76
SHMT2-221ENST00000555773 ZNF565Q8N9K5 539 aa10.33□□□□□ -0.76
SHMT2-221ENST00000555773 C8orf46Q8TAG6 207 aa10.33□□□□□ -0.76
SHMT2-221ENST00000555773 DCTN5Q9BTE1 182 aa10.33□□□□□ -0.76
SHMT2-221ENST00000555773 AUNIPQ9H7T9 357 aa10.33□□□□□ -0.76
SHMT2-221ENST00000555773 KCNK7Q9Y2U2 307 aa10.33□□□□□ -0.76
SHMT2-221ENST00000555773 TRBV6-6A0A0A6YYG2 114 aa10.32□□□□□ -0.76
SHMT2-221ENST00000555773 PPIAL4CA0A0B4J2A2 164 aa10.32□□□□□ -0.76
SHMT2-221ENST00000555773 hADV38S2A0JD32 116 aa10.32□□□□□ -0.76
SHMT2-221ENST00000555773 TMEM30CPA0ZSE6 113 aa10.32□□□□□ -0.76
SHMT2-221ENST00000555773 PHF1O43189 567 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-221ENST00000555773 HLA-DQB1P01920 261 aa10.32□□□□□ -0.76
SHMT2-221ENST00000555773 CD3GP09693 182 aa10.32□□□□□ -0.76
SHMT2-221ENST00000555773 GZMHP20718 246 aa10.32□□□□□ -0.76
SHMT2-221ENST00000555773 PTBP1P26599 531 aaKnown RBP eCLIP10.32□□□□□ -0.76
SHMT2-221ENST00000555773 ZFP36P26651 326 aaKnown RBP10.32□□□□□ -0.76
SHMT2-221ENST00000555773 IL2RGP31785 369 aa10.32□□□□□ -0.76
SHMT2-221ENST00000555773 GZMKP49863 264 aa10.32□□□□□ -0.76
SHMT2-221ENST00000555773 EDDM3BP56851 147 aa10.32□□□□□ -0.76
SHMT2-221ENST00000555773 TAS2R20P59543 309 aa10.32□□□□□ -0.76
SHMT2-221ENST00000555773 SEC61A1P61619 476 aaKnown RBP10.32□□□□□ -0.76
SHMT2-221ENST00000555773 RPL31P62899 125 aaKnown RBP10.32□□□□□ -0.76
SHMT2-221ENST00000555773 ATXN7L3Q14CW9 347 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-221ENST00000555773 CNIH2Q6PI25 160 aa10.32□□□□□ -0.76
SHMT2-221ENST00000555773 LINC01356Q8N9X3 169 aa10.32□□□□□ -0.76
SHMT2-221ENST00000555773 LY6G5BQ8NDX9 201 aa10.32□□□□□ -0.76
SHMT2-221ENST00000555773 OR4M1Q8NGD0 313 aa10.32□□□□□ -0.76
SHMT2-221ENST00000555773 PLPPR1Q8TBJ4 325 aa10.32□□□□□ -0.76
SHMT2-221ENST00000555773 H1FXQ92522 213 aaKnown RBP10.32□□□□□ -0.76
SHMT2-221ENST00000555773 CORO2AQ92828 525 aa10.32□□□□□ -0.76
SHMT2-221ENST00000555773 COQ2Q96H96 371 aa10.32□□□□□ -0.76
SHMT2-221ENST00000555773 CMSS1Q9BQ75 279 aaKnown RBP10.32□□□□□ -0.76
SHMT2-221ENST00000555773 SOSTQ9BQB4 213 aa10.32□□□□□ -0.76
SHMT2-221ENST00000555773 ZMAT3Q9HA38 289 aaKnown RBP10.32□□□□□ -0.76
SHMT2-221ENST00000555773 OR6C3Q9NZP0 311 aa10.32□□□□□ -0.76
SHMT2-221ENST00000555773 AK3Q9UIJ7 227 aa10.32□□□□□ -0.76
SHMT2-221ENST00000555773 MRPS7Q9Y2R9 242 aaKnown RBP10.32□□□□□ -0.76
SHMT2-221ENST00000555773 MEIKINA0A087WXM9 373 aa10.31□□□□□ -0.76
SHMT2-221ENST00000555773 TRGV10A0A0A0MS01 117 aa10.31□□□□□ -0.76
SHMT2-221ENST00000555773 A0A1W2PPH5 198 aa10.31□□□□□ -0.76
SHMT2-221ENST00000555773 ODAMA1E959 279 aa10.31□□□□□ -0.76
SHMT2-221ENST00000555773 FABP12A6NFH5 140 aa10.31□□□□□ -0.76
SHMT2-221ENST00000555773 KIAA1324LA8MWY0 1029 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-221ENST00000555773 FAM157AC9JC47 383 aa10.31□□□□□ -0.76
SHMT2-221ENST00000555773 NAPSAO96009 420 aa10.31□□□□□ -0.76
SHMT2-221ENST00000555773 PRSS3P35030 304 aa10.31□□□□□ -0.76
SHMT2-221ENST00000555773 ETV6P41212 452 aa10.31□□□□□ -0.76
SHMT2-221ENST00000555773 GLIPR1P48060 266 aa10.31□□□□□ -0.76
SHMT2-221ENST00000555773 ARFRP1Q13795 201 aa10.31□□□□□ -0.76
SHMT2-221ENST00000555773 EDDM3AQ14507 147 aa10.31□□□□□ -0.76
SHMT2-221ENST00000555773 CR1LQ2VPA4 569 aa10.31□□□□□ -0.76
SHMT2-221ENST00000555773 TMEM249Q2WGJ8 235 aa10.31□□□□□ -0.76
SHMT2-221ENST00000555773 SPANXN2Q5MJ10 180 aa10.31□□□□□ -0.76
SHMT2-221ENST00000555773 TMEM200BQ69YZ2 307 aa10.31□□□□□ -0.76
SHMT2-221ENST00000555773 PYHIN1Q6K0P9 492 aa10.31□□□□□ -0.76
SHMT2-221ENST00000555773 CCDC190Q86UF4 302 aa10.31□□□□□ -0.76
SHMT2-221ENST00000555773 IZUMO1Q8IYV9 350 aa10.31□□□□□ -0.76
SHMT2-221ENST00000555773 C12orf4Q9NQ89 552 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms