RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 OR2W3Q7Z3T1 314 aa0.33□□□□□ -2.36
SNX6-204ENST00000555541 KRTCAP2Q8N6L1 136 aa0.33□□□□□ -2.36
SNX6-204ENST00000555541 TCP10LQ8TDR4 215 aa0.33□□□□□ -2.36
SNX6-204ENST00000555541 CCL17Q92583 94 aa0.33□□□□□ -2.36
SNX6-204ENST00000555541 GPR22Q99680 433 aa0.33□□□□□ -2.36
SNX6-204ENST00000555541 AHSPQ9NZD4 102 aa0.33□□□□□ -2.36
SNX6-204ENST00000555541 BTRCQ9Y297 605 aa0.33□□□□□ -2.36
SNX6-204ENST00000555541 FREM1Q5H8C1 2179 aa0.32□□□□□ -2.36
SNX6-204ENST00000555541 ATRNO75882 1429 aa0.32□□□□□ -2.36
SNX6-204ENST00000555541 TRAV25A0A0B4J276 109 aa0.32□□□□□ -2.36
SNX6-204ENST00000555541 A8MWP6 167 aa0.32□□□□□ -2.36
SNX6-204ENST00000555541 PHGR1C9JFL3 82 aa0.32□□□□□ -2.36
SNX6-204ENST00000555541 H7C2Y5 167 aa0.32□□□□□ -2.36
SNX6-204ENST00000555541 P2RY2P41231 377 aa0.32□□□□□ -2.36
SNX6-204ENST00000555541 FAM229BQ4G0N7 80 aa0.32□□□□□ -2.36
SNX6-204ENST00000555541 COA5Q86WW8 74 aa0.32□□□□□ -2.36
SNX6-204ENST00000555541 ERMNQ8TAM6 284 aa0.32□□□□□ -2.36
SNX6-204ENST00000555541 CD200R1Q8TD46 325 aa0.32□□□□□ -2.36
SNX6-204ENST00000555541 KCTD4Q8WVF5 259 aa0.32□□□□□ -2.36
SNX6-204ENST00000555541 FMC1Q96HJ9 113 aa0.32□□□□□ -2.36
SNX6-204ENST00000555541 REEP6Q96HR9 211 aa0.32□□□□□ -2.36
SNX6-204ENST00000555541 CLSTN2Q9H4D0 955 aa0.32□□□□□ -2.36
SNX6-204ENST00000555541 RAB20Q9NX57 234 aa0.32□□□□□ -2.36
SNX6-204ENST00000555541 ANXA10Q9UJ72 324 aa0.32□□□□□ -2.36
SNX6-204ENST00000555541 TECTAO75443 2155 aa0.32□□□□□ -2.36
SNX6-204ENST00000555541 SNX4O95219 450 aa0.31□□□□□ -2.36
SNX6-204ENST00000555541 PMCHP20382 165 aa0.31□□□□□ -2.36
SNX6-204ENST00000555541 M6PRP20645 277 aa0.31□□□□□ -2.36
SNX6-204ENST00000555541 XKP51811 444 aa0.31□□□□□ -2.36
SNX6-204ENST00000555541 OR2B6P58173 313 aa0.31□□□□□ -2.36
SNX6-204ENST00000555541 SLC35B1P78383 322 aa0.31□□□□□ -2.36
SNX6-204ENST00000555541 GOLGA7BQ2TAP0 167 aa0.31□□□□□ -2.36
SNX6-204ENST00000555541 CEACAM16Q2WEN9 425 aa0.31□□□□□ -2.36
SNX6-204ENST00000555541 TIMM23BQ5SRD1 257 aa0.31□□□□□ -2.36
SNX6-204ENST00000555541 ELP2Q6IA86 826 aa0.31□□□□□ -2.36
SNX6-204ENST00000555541 CYP4Z1Q86W10 505 aa0.31□□□□□ -2.36
SNX6-204ENST00000555541 NDNFQ8TB73 568 aa0.31□□□□□ -2.36
SNX6-204ENST00000555541 TMIGD2Q96BF3 282 aa0.31□□□□□ -2.36
SNX6-204ENST00000555541 POMKQ9H5K3 350 aa0.31□□□□□ -2.36
SNX6-204ENST00000555541 MRPL22Q9NWU5 206 aaKnown RBP0.31□□□□□ -2.36
SNX6-204ENST00000555541 ZMAT5Q9UDW3 170 aaKnown RBP0.31□□□□□ -2.36
SNX6-204ENST00000555541 MRPS16Q9Y3D3 137 aaKnown RBP0.31□□□□□ -2.36
SNX6-204ENST00000555541 WDR19Q8NEZ3 1342 aa0.31□□□□□ -2.36
SNX6-204ENST00000555541 NRCAMQ92823 1304 aa0.31□□□□□ -2.36
SNX6-204ENST00000555541 INTS1Q8N201 2190 aaKnown RBP0.3□□□□□ -2.36
SNX6-204ENST00000555541 MUC5ACP98088 5654 aa0.3□□□□□ -2.36
SNX6-204ENST00000555541 DENND4BO75064 1496 aaPredicted RBP0.3□□□□□ -2.36
SNX6-204ENST00000555541 IGHV3OR15-7A0A075B7D8 119 aa0.3□□□□□ -2.36
SNX6-204ENST00000555541 ARRDC5A6NEK1 342 aa0.3□□□□□ -2.36
SNX6-204ENST00000555541 DNAJB6O75190 326 aa0.3□□□□□ -2.36
SNX6-204ENST00000555541 OR8G3PP0DMU2 310 aa0.3□□□□□ -2.36
SNX6-204ENST00000555541 CD36P16671 472 aa0.3□□□□□ -2.36
SNX6-204ENST00000555541 RWDD2BP57060 319 aa0.3□□□□□ -2.36
SNX6-204ENST00000555541 RPL31P62899 125 aaKnown RBP0.3□□□□□ -2.36
SNX6-204ENST00000555541 CTAG1AP78358 180 aa0.3□□□□□ -2.36
SNX6-204ENST00000555541 ZNF117Q03924 483 aa0.3□□□□□ -2.36
SNX6-204ENST00000555541 C2orf80Q0P641 193 aa0.3□□□□□ -2.36
SNX6-204ENST00000555541 CEACAM21Q3KPI0 293 aa0.3□□□□□ -2.36
SNX6-204ENST00000555541 KIAA2026Q5HYC2 2103 aa0.3□□□□□ -2.36
SNX6-204ENST00000555541 NXNL2Q5VZ03 156 aa0.3□□□□□ -2.36
SNX6-204ENST00000555541 ULK3Q6PHR2 472 aa0.3□□□□□ -2.36
SNX6-204ENST00000555541 SDIM1Q6ZPB5 146 aa0.3□□□□□ -2.36
SNX6-204ENST00000555541 OR51A7Q8NH64 312 aa0.3□□□□□ -2.36
SNX6-204ENST00000555541 SPACA4Q8TDM5 124 aa0.3□□□□□ -2.36
SNX6-204ENST00000555541 LINC01587Q99440 93 aa0.3□□□□□ -2.36
SNX6-204ENST00000555541 ANP32EQ9BTT0 268 aa0.3□□□□□ -2.36
SNX6-204ENST00000555541 VCX3AQ9NNX9 186 aa0.3□□□□□ -2.36
SNX6-204ENST00000555541 SOX21Q9Y651 276 aaPredicted RBP0.3□□□□□ -2.36
SNX6-204ENST00000555541 NUMA1Q14980 2115 aa0.29□□□□□ -2.36
SNX6-204ENST00000555541 A0A1B0GXF2 115 aa0.29□□□□□ -2.36
SNX6-204ENST00000555541 A0A1W2PRF3 423 aa0.29□□□□□ -2.36
SNX6-204ENST00000555541 A0A1W2PRM7 423 aa0.29□□□□□ -2.36
SNX6-204ENST00000555541 TCF21O43680 179 aa0.29□□□□□ -2.36
SNX6-204ENST00000555541 ZNF705DP0CH99 300 aaPredicted RBP0.29□□□□□ -2.36
SNX6-204ENST00000555541 ZNF705BP0CI00 300 aaPredicted RBP0.29□□□□□ -2.36
SNX6-204ENST00000555541 SPAM1P38567 509 aa0.29□□□□□ -2.36
SNX6-204ENST00000555541 TAS2R60P59551 318 aa0.29□□□□□ -2.36
SNX6-204ENST00000555541 LCN2P80188 198 aa0.29□□□□□ -2.36
SNX6-204ENST00000555541 PLCXD3Q63HM9 321 aa0.29□□□□□ -2.36
SNX6-204ENST00000555541 GAPTQ8N292 157 aa0.29□□□□□ -2.36
SNX6-204ENST00000555541 ZFAND2AQ8N6M9 145 aa0.29□□□□□ -2.36
SNX6-204ENST00000555541 ALX4Q9H161 411 aaPredicted RBP0.29□□□□□ -2.36
SNX6-204ENST00000555541 WDR55Q9H6Y2 383 aaPredicted RBP0.29□□□□□ -2.36
SNX6-204ENST00000555541 EXO5Q9H790 373 aa0.29□□□□□ -2.36
SNX6-204ENST00000555541 NDUFB11Q9NX14 153 aa0.29□□□□□ -2.36
SNX6-204ENST00000555541 BABAM2Q9NXR7 383 aa0.29□□□□□ -2.36
SNX6-204ENST00000555541 PRO2289Q9P1D8 64 aa0.29□□□□□ -2.36
SNX6-204ENST00000555541 USP42Q9H9J4 1324 aaKnown RBP0.29□□□□□ -2.36
SNX6-204ENST00000555541 CTAGE15A4D2H0 777 aa0.28□□□□□ -2.36
SNX6-204ENST00000555541 VPS37CA5D8V6 355 aaPredicted RBP0.28□□□□□ -2.36
SNX6-204ENST00000555541 PGPA6NDG6 321 aa0.28□□□□□ -2.36
SNX6-204ENST00000555541 CENPXA8MT69 81 aa0.28□□□□□ -2.36
SNX6-204ENST00000555541 GOLGA8TH3BQL2 631 aa0.28□□□□□ -2.36
SNX6-204ENST00000555541 M0QXV9 152 aa0.28□□□□□ -2.36
SNX6-204ENST00000555541 MYO1DO94832 1006 aa0.28□□□□□ -2.36
SNX6-204ENST00000555541 CRYGDP07320 174 aa0.28□□□□□ -2.36
SNX6-204ENST00000555541 ALOX5APP20292 161 aa0.28□□□□□ -2.36
SNX6-204ENST00000555541 PEBP1P30086 187 aaKnown RBP0.28□□□□□ -2.36
SNX6-204ENST00000555541 ZBTB6Q15916 424 aa0.28□□□□□ -2.36
SNX6-204ENST00000555541 ACTBL2Q562R1 376 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms