RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 HKR1P10072 659 aa20.66■□□□□ 0.9
TMEM260-207ENST00000555497 COX5AP20674 150 aa20.66■□□□□ 0.9
TMEM260-207ENST00000555497 NUP62P37198 522 aaPredicted RBP20.66■□□□□ 0.9
TMEM260-207ENST00000555497 KCNJ3P48549 501 aa20.66■□□□□ 0.9
TMEM260-207ENST00000555497 UCP2P55851 309 aa20.66■□□□□ 0.9
TMEM260-207ENST00000555497 FAM76BQ5HYJ3 339 aa20.66■□□□□ 0.9
TMEM260-207ENST00000555497 OR2A2Q6IF42 318 aa20.66■□□□□ 0.9
TMEM260-207ENST00000555497 LINC00596Q86U02 117 aa20.66■□□□□ 0.9
TMEM260-207ENST00000555497 DKK4Q9UBT3 224 aa20.66■□□□□ 0.9
TMEM260-207ENST00000555497 IGKV1D-13A0A0B4J2D9 117 aa20.65■□□□□ 0.9
TMEM260-207ENST00000555497 IGKV1-13P0DP09 117 aa20.65■□□□□ 0.9
TMEM260-207ENST00000555497 ATF4P18848 351 aaPredicted RBP20.65■□□□□ 0.9
TMEM260-207ENST00000555497 NAAAQ02083 359 aa20.65■□□□□ 0.9
TMEM260-207ENST00000555497 PSG7Q13046 419 aa20.65■□□□□ 0.9
TMEM260-207ENST00000555497 Q6P435 159 aa20.65■□□□□ 0.9
TMEM260-207ENST00000555497 BAP18Q8IXM2 172 aa20.65■□□□□ 0.9
TMEM260-207ENST00000555497 SCCPDHQ8NBX0 429 aa20.65■□□□□ 0.9
TMEM260-207ENST00000555497 OR1J1Q8NGS3 322 aa20.65■□□□□ 0.9
TMEM260-207ENST00000555497 SYT3Q9BQG1 590 aa20.65■□□□□ 0.9
TMEM260-207ENST00000555497 RTL8AQ9BWD3 113 aa20.65■□□□□ 0.9
TMEM260-207ENST00000555497 ATP23Q9Y6H3 246 aa20.65■□□□□ 0.9
TMEM260-207ENST00000555497 PHF1O43189 567 aaPredicted RBP20.65■□□□□ 0.9
TMEM260-207ENST00000555497 DEDDO75618 318 aa20.65■□□□□ 0.9
TMEM260-207ENST00000555497 TPT1P13693 172 aaKnown RBP20.65■□□□□ 0.9
TMEM260-207ENST00000555497 MPV17P39210 176 aa20.65■□□□□ 0.9
TMEM260-207ENST00000555497 IL13RA2Q14627 380 aa20.65■□□□□ 0.9
TMEM260-207ENST00000555497 TUSC1Q2TAM9 212 aa20.65■□□□□ 0.9
TMEM260-207ENST00000555497 ZNF585AQ6P3V2 769 aa20.65■□□□□ 0.9
TMEM260-207ENST00000555497 EIF4E3Q8N5X7 224 aaKnown RBP20.65■□□□□ 0.9
TMEM260-207ENST00000555497 LSM5Q9Y4Y9 91 aaKnown RBP20.65■□□□□ 0.9
TMEM260-207ENST00000555497 H0YL77 283 aa20.64■□□□□ 0.89
TMEM260-207ENST00000555497 H7C1Q1 480 aa20.64■□□□□ 0.89
TMEM260-207ENST00000555497 MPPED1O15442 326 aa20.64■□□□□ 0.89
TMEM260-207ENST00000555497 TK1P04183 234 aa20.64■□□□□ 0.89
TMEM260-207ENST00000555497 LDLRAD3Q86YD5 345 aa20.64■□□□□ 0.89
TMEM260-207ENST00000555497 GPHA2Q96T91 129 aa20.64■□□□□ 0.89
TMEM260-207ENST00000555497 SPACA1Q9HBV2 294 aa20.64■□□□□ 0.89
TMEM260-207ENST00000555497 BOD1L1Q8NFC6 3051 aa20.64■□□□□ 0.89
TMEM260-207ENST00000555497 CNOT4O95628 575 aaKnown RBP20.63■□□□□ 0.89
TMEM260-207ENST00000555497 MBPP02686 304 aaPredicted RBP20.63■□□□□ 0.89
TMEM260-207ENST00000555497 CEACAM1P13688 526 aa20.63■□□□□ 0.89
TMEM260-207ENST00000555497 RAC2P15153 192 aa20.63■□□□□ 0.89
TMEM260-207ENST00000555497 CBR1P16152 277 aa20.63■□□□□ 0.89
TMEM260-207ENST00000555497 RCC1P18754 421 aaPredicted RBP20.63■□□□□ 0.89
TMEM260-207ENST00000555497 SECTM1Q8WVN6 248 aa20.63■□□□□ 0.89
TMEM260-207ENST00000555497 AIFM2Q9BRQ8 373 aa20.63■□□□□ 0.89
TMEM260-207ENST00000555497 SESN1Q9Y6P5 492 aa20.63■□□□□ 0.89
TMEM260-207ENST00000555497 AKAP13Q12802 2813 aa20.63■□□□□ 0.89
TMEM260-207ENST00000555497 LRP5LA4QPB2 252 aa20.63■□□□□ 0.89
TMEM260-207ENST00000555497 TUSC2O75896 110 aa20.63■□□□□ 0.89
TMEM260-207ENST00000555497 SCGB1D2O95969 90 aa20.63■□□□□ 0.89
TMEM260-207ENST00000555497 STPG2Q8N412 459 aa20.63■□□□□ 0.89
TMEM260-207ENST00000555497 CCDC71LQ8N9Z2 235 aa20.63■□□□□ 0.89
TMEM260-207ENST00000555497 GTF3AQ92664 365 aaKnown RBP20.63■□□□□ 0.89
TMEM260-207ENST00000555497 ADAT1Q9BUB4 502 aaKnown RBP20.63■□□□□ 0.89
TMEM260-207ENST00000555497 IQCF6A8MYZ5 107 aa20.62■□□□□ 0.89
TMEM260-207ENST00000555497 TSPAN4O14817 238 aa20.62■□□□□ 0.89
TMEM260-207ENST00000555497 SLC34A2O95436 690 aa20.62■□□□□ 0.89
TMEM260-207ENST00000555497 DIRAS3O95661 229 aa20.62■□□□□ 0.89
TMEM260-207ENST00000555497 IGKV3-15P01624 115 aa20.62■□□□□ 0.89
TMEM260-207ENST00000555497 SELEP16581 610 aa20.62■□□□□ 0.89
TMEM260-207ENST00000555497 ERVK11-1P61568 191 aa20.62■□□□□ 0.89
TMEM260-207ENST00000555497 ZNF154Q13106 437 aa20.62■□□□□ 0.89
TMEM260-207ENST00000555497 ZNF169Q14929 603 aaPredicted RBP20.62■□□□□ 0.89
TMEM260-207ENST00000555497 PCSK4Q6UW60 755 aa20.62■□□□□ 0.89
TMEM260-207ENST00000555497 ZNF818PQ6ZRF7 136 aa20.62■□□□□ 0.89
TMEM260-207ENST00000555497 LGI3Q8N145 548 aa20.62■□□□□ 0.89
TMEM260-207ENST00000555497 TMED6Q8WW62 240 aa20.62■□□□□ 0.89
TMEM260-207ENST00000555497 KIR2DS1A0A191URI9 304 aa20.62■□□□□ 0.89
TMEM260-207ENST00000555497 C3orf85A0A1B0GTC6 90 aa20.62■□□□□ 0.89
TMEM260-207ENST00000555497 TNFSF13O75888 250 aa20.62■□□□□ 0.89
TMEM260-207ENST00000555497 KIR2DS4P43632 304 aa20.62■□□□□ 0.89
TMEM260-207ENST00000555497 KIR2DS1Q14954 304 aa20.62■□□□□ 0.89
TMEM260-207ENST00000555497 RTP5Q14D33 572 aa20.62■□□□□ 0.89
TMEM260-207ENST00000555497 SEM1Q6ZVN7 128 aa20.62■□□□□ 0.89
TMEM260-207ENST00000555497 ZADH2Q8N4Q0 377 aa20.62■□□□□ 0.89
TMEM260-207ENST00000555497 ZNF610Q8N9Z0 462 aa20.62■□□□□ 0.89
TMEM260-207ENST00000555497 OR52M1Q8NGK5 317 aa20.62■□□□□ 0.89
TMEM260-207ENST00000555497 KLF14Q8TD94 323 aaPredicted RBP20.62■□□□□ 0.89
TMEM260-207ENST00000555497 PRRX2Q99811 253 aa20.62■□□□□ 0.89
TMEM260-207ENST00000555497 OR2S2Q9NQN1 319 aa20.62■□□□□ 0.89
TMEM260-207ENST00000555497 PLSCR4Q9NRQ2 329 aa20.62■□□□□ 0.89
TMEM260-207ENST00000555497 TRBV6-6A0A0A6YYG2 114 aa20.61■□□□□ 0.89
TMEM260-207ENST00000555497 DEGS1O15121 323 aa20.61■□□□□ 0.89
TMEM260-207ENST00000555497 FGF16O43320 207 aa20.61■□□□□ 0.89
TMEM260-207ENST00000555497 ZNF44P15621 663 aa20.61■□□□□ 0.89
TMEM260-207ENST00000555497 FAM122CQ6P4D5 195 aa20.61■□□□□ 0.89
TMEM260-207ENST00000555497 ZNF880Q6PDB4 577 aa20.61■□□□□ 0.89
TMEM260-207ENST00000555497 MEX3BQ6ZN04 569 aaKnown RBP20.61■□□□□ 0.89
TMEM260-207ENST00000555497 TBC1D26Q86UD7 250 aa20.61■□□□□ 0.89
TMEM260-207ENST00000555497 IFT22Q9H7X7 185 aa20.61■□□□□ 0.89
TMEM260-207ENST00000555497 AHRRA9YTQ3 701 aa20.61■□□□□ 0.89
TMEM260-207ENST00000555497 CDIPTO14735 213 aa20.61■□□□□ 0.89
TMEM260-207ENST00000555497 HOXB1P14653 301 aaPredicted RBP20.61■□□□□ 0.89
TMEM260-207ENST00000555497 RPL12P30050 165 aaKnown RBP20.61■□□□□ 0.89
TMEM260-207ENST00000555497 RPL7L1Q6DKI1 246 aaKnown RBP20.61■□□□□ 0.89
TMEM260-207ENST00000555497 CXorf67Q86X51 503 aaPredicted RBP20.61■□□□□ 0.89
TMEM260-207ENST00000555497 GAPTQ8N292 157 aa20.61■□□□□ 0.89
TMEM260-207ENST00000555497 SLC35G3Q8N808 338 aa20.61■□□□□ 0.89
TMEM260-207ENST00000555497 BOLLQ8N9W6 283 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms