RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 C11orf54Q9H0W9 315 aaPredicted RBP8.97□□□□□ -0.97
TDP1-211ENST00000555178 RASL12Q9NYN1 266 aa8.97□□□□□ -0.97
TDP1-211ENST00000555178 MAB21L2Q9Y586 359 aa8.97□□□□□ -0.97
TDP1-211ENST00000555178 OTOGQ6ZRI0 2925 aa8.97□□□□□ -0.97
TDP1-211ENST00000555178 WNK2Q9Y3S1 2297 aa8.97□□□□□ -0.97
TDP1-211ENST00000555178 MT-ND4P03905 459 aa8.97□□□□□ -0.97
TDP1-211ENST00000555178 HLA-DMAP28067 261 aa8.97□□□□□ -0.97
TDP1-211ENST00000555178 OR3A1P47881 315 aa8.97□□□□□ -0.97
TDP1-211ENST00000555178 SEC61A1P61619 476 aaKnown RBP8.97□□□□□ -0.97
TDP1-211ENST00000555178 TEX36Q5VZQ5 186 aa8.97□□□□□ -0.97
TDP1-211ENST00000555178 KRTAP1-3Q8IUG1 177 aa8.97□□□□□ -0.97
TDP1-211ENST00000555178 POC5Q8NA72 575 aa8.97□□□□□ -0.97
TDP1-211ENST00000555178 TMEM246Q9BRR3 403 aa8.97□□□□□ -0.97
TDP1-211ENST00000555178 SHARPINQ9H0F6 387 aa8.97□□□□□ -0.97
TDP1-211ENST00000555178 OCEL1Q9H607 264 aa8.97□□□□□ -0.97
TDP1-211ENST00000555178 IFT22Q9H7X7 185 aa8.97□□□□□ -0.97
TDP1-211ENST00000555178 CTSZQ9UBR2 303 aa8.97□□□□□ -0.97
TDP1-211ENST00000555178 PPIAL4EA0A075B759 164 aa8.96□□□□□ -0.97
TDP1-211ENST00000555178 MCRIP1C9JLW8 97 aa8.96□□□□□ -0.97
TDP1-211ENST00000555178 PPIAL4DF5H284 164 aa8.96□□□□□ -0.97
TDP1-211ENST00000555178 M0QYG6 137 aa8.96□□□□□ -0.97
TDP1-211ENST00000555178 PPIHO43447 177 aaKnown RBP8.96□□□□□ -0.97
TDP1-211ENST00000555178 ZNF737O75373 536 aa8.96□□□□□ -0.97
TDP1-211ENST00000555178 RBBP9O75884 186 aa8.96□□□□□ -0.97
TDP1-211ENST00000555178 IGHV2-70P01814 119 aa8.96□□□□□ -0.97
TDP1-211ENST00000555178 CD3DP04234 171 aa8.96□□□□□ -0.97
TDP1-211ENST00000555178 FCGR3AP08637 254 aa8.96□□□□□ -0.97
TDP1-211ENST00000555178 PPIAL4FP0DN26 164 aa8.96□□□□□ -0.97
TDP1-211ENST00000555178 SPNP16150 400 aa8.96□□□□□ -0.97
TDP1-211ENST00000555178 INPP1P49441 399 aa8.96□□□□□ -0.97
TDP1-211ENST00000555178 MRPS10P82664 201 aaKnown RBP8.96□□□□□ -0.97
TDP1-211ENST00000555178 PNLIPRP3Q17RR3 467 aa8.96□□□□□ -0.97
TDP1-211ENST00000555178 TOMM5Q8N4H5 51 aa8.96□□□□□ -0.97
TDP1-211ENST00000555178 OR4K15Q8NH41 348 aa8.96□□□□□ -0.97
TDP1-211ENST00000555178 GAFA1Q96PS6 74 aa8.96□□□□□ -0.97
TDP1-211ENST00000555178 SCPEP1Q9HB40 452 aa8.96□□□□□ -0.97
TDP1-211ENST00000555178 PALMDQ9NP74 551 aa8.96□□□□□ -0.97
TDP1-211ENST00000555178 ETAA1Q9NY74 926 aa8.96□□□□□ -0.97
TDP1-211ENST00000555178 PPIAL4AQ9Y536 164 aa8.96□□□□□ -0.97
TDP1-211ENST00000555178 FLNAP21333 2647 aaKnown RBP8.96□□□□□ -0.98
TDP1-211ENST00000555178 IGHV4-30-2A0A087WSY4 118 aa8.96□□□□□ -0.98
TDP1-211ENST00000555178 ANKRD20A5PA0PJZ0 165 aa8.96□□□□□ -0.98
TDP1-211ENST00000555178 LGALS8O00214 317 aa8.96□□□□□ -0.98
TDP1-211ENST00000555178 TPPPO94811 219 aa8.96□□□□□ -0.98
TDP1-211ENST00000555178 LMO1P25800 156 aa8.96□□□□□ -0.98
TDP1-211ENST00000555178 BTG1P62324 171 aa8.96□□□□□ -0.98
TDP1-211ENST00000555178 AESQ08117 197 aa8.96□□□□□ -0.98
TDP1-211ENST00000555178 EDDM3AQ14507 147 aa8.96□□□□□ -0.98
TDP1-211ENST00000555178 C1orf87Q8N0U7 546 aa8.96□□□□□ -0.98
TDP1-211ENST00000555178 UBALD1Q8TB05 177 aa8.96□□□□□ -0.98
TDP1-211ENST00000555178 SETD6Q8TBK2 473 aa8.96□□□□□ -0.98
TDP1-211ENST00000555178 MRPL30Q8TCC3 161 aaKnown RBP8.96□□□□□ -0.98
TDP1-211ENST00000555178 C15orf40Q8WUR7 153 aa8.96□□□□□ -0.98
TDP1-211ENST00000555178 CCDC107Q8WV48 283 aa8.96□□□□□ -0.98
TDP1-211ENST00000555178 COQ2Q96H96 371 aa8.96□□□□□ -0.98
TDP1-211ENST00000555178 BPESC1Q9GZL8 116 aa8.96□□□□□ -0.98
TDP1-211ENST00000555178 C12orf4Q9NQ89 552 aa8.96□□□□□ -0.98
TDP1-211ENST00000555178 IFT46Q9NQC8 304 aa8.96□□□□□ -0.98
TDP1-211ENST00000555178 RABL2AQ9UBK7 228 aaPredicted RBP8.96□□□□□ -0.98
TDP1-211ENST00000555178 RABL2BQ9UNT1 228 aa8.96□□□□□ -0.98
TDP1-211ENST00000555178 ISPDA4D126 451 aa8.95□□□□□ -0.98
TDP1-211ENST00000555178 SULT1C2O00338 296 aa8.95□□□□□ -0.98
TDP1-211ENST00000555178 TMPRSS2O15393 492 aa8.95□□□□□ -0.98
TDP1-211ENST00000555178 NAPSAO96009 420 aa8.95□□□□□ -0.98
TDP1-211ENST00000555178 CSN2P05814 226 aa8.95□□□□□ -0.98
TDP1-211ENST00000555178 RCC1P18754 421 aaPredicted RBP8.95□□□□□ -0.98
TDP1-211ENST00000555178 IL2RGP31785 369 aa8.95□□□□□ -0.98
TDP1-211ENST00000555178 BTCP35070 178 aa8.95□□□□□ -0.98
TDP1-211ENST00000555178 RFX2P48378 723 aa8.95□□□□□ -0.98
TDP1-211ENST00000555178 DEFB113Q30KQ7 82 aa8.95□□□□□ -0.98
TDP1-211ENST00000555178 DCTN5Q9BTE1 182 aa8.95□□□□□ -0.98
TDP1-211ENST00000555178 TINAGL1Q9GZM7 467 aaPredicted RBP8.95□□□□□ -0.98
TDP1-211ENST00000555178 SPACA1Q9HBV2 294 aa8.95□□□□□ -0.98
TDP1-211ENST00000555178 CHMP1AQ9HD42 196 aaPredicted RBP8.95□□□□□ -0.98
TDP1-211ENST00000555178 MUC1P15941 1255 aaPredicted RBP8.95□□□□□ -0.98
TDP1-211ENST00000555178 HRH1P35367 487 aa8.95□□□□□ -0.98
TDP1-211ENST00000555178 GLIPR1P48060 266 aa8.95□□□□□ -0.98
TDP1-211ENST00000555178 ASAH1Q13510 395 aa8.95□□□□□ -0.98
TDP1-211ENST00000555178 GRK1Q15835 563 aa8.95□□□□□ -0.98
TDP1-211ENST00000555178 RSBN1Q5VWQ0 802 aaPredicted RBP8.95□□□□□ -0.98
TDP1-211ENST00000555178 ZNF788Q6ZQV5 615 aa8.95□□□□□ -0.98
TDP1-211ENST00000555178 NRARPQ7Z6K4 114 aa8.95□□□□□ -0.98
TDP1-211ENST00000555178 TMEM185AQ8NFB2 350 aa8.95□□□□□ -0.98
TDP1-211ENST00000555178 OR4C16Q8NGL9 310 aa8.95□□□□□ -0.98
TDP1-211ENST00000555178 OCSTAMPQ9BR26 566 aa8.95□□□□□ -0.98
TDP1-211ENST00000555178 GSX2Q9BZM3 304 aa8.95□□□□□ -0.98
TDP1-211ENST00000555178 CHODLQ9H9P2 273 aa8.95□□□□□ -0.98
TDP1-211ENST00000555178 HRASLSQ9HDD0 168 aa8.95□□□□□ -0.98
TDP1-211ENST00000555178 GLS2Q9UI32 602 aa8.95□□□□□ -0.98
TDP1-211ENST00000555178 ANAPC10Q9UM13 185 aa8.95□□□□□ -0.98
TDP1-211ENST00000555178 ZFHX3Q15911 3703 aa8.94□□□□□ -0.98
TDP1-211ENST00000555178 ACANP16112 2415 aa8.94□□□□□ -0.98
TDP1-211ENST00000555178 TRAV38-1A0A0B4J264 116 aa8.94□□□□□ -0.98
TDP1-211ENST00000555178 IFNL4K9M1U5 179 aa8.94□□□□□ -0.98
TDP1-211ENST00000555178 LYRM1O43325 122 aa8.94□□□□□ -0.98
TDP1-211ENST00000555178 PMP2P02689 132 aa8.94□□□□□ -0.98
TDP1-211ENST00000555178 PAX1P15863 534 aa8.94□□□□□ -0.98
TDP1-211ENST00000555178 RCVRNP35243 200 aa8.94□□□□□ -0.98
TDP1-211ENST00000555178 CCR6P51684 374 aa8.94□□□□□ -0.98
TDP1-211ENST00000555178 ACTBP60709 375 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms