RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 ECDO95905 644 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-231ENST00000554994 HAND1O96004 215 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 IGLV3-1P01715 115 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 MT-ND2P03891 347 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 LIPFP07098 398 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 SFTPBP07988 381 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 CHRM2P08172 466 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 RBMY1DP0C7P1 496 aaKnown RBP3.82□□□□□ -1.8
ATXN3-231ENST00000554994 PGA5P0DJD9 388 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 ZNF44P15621 663 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 SERPINA2P20848 420 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 CCL1P22362 96 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 BDKRB2P30411 391 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 ZNF93P35789 620 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-231ENST00000554994 DLX1P56177 255 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 LOXL3P58215 753 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 TAS2R43P59537 309 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 PAX8Q06710 450 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 IL24Q13007 206 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 BAMBIQ13145 260 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 CDK5R1Q15078 307 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 SPHARQ15513 63 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 KISS1Q15726 138 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 GRK1Q15835 563 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 DGUOKQ16854 277 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 BEAN1Q3B7T3 259 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 Q499Y3 187 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 ACSM3Q53FZ2 586 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 FAM76BQ5HYJ3 339 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 RBM48Q5RL73 367 aaKnown RBP3.82□□□□□ -1.8
ATXN3-231ENST00000554994 ATAD3CQ5T2N8 411 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 DDI2Q5TDH0 399 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 LIPKQ5VXJ0 399 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 TEX36Q5VZQ5 186 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 RUSC1-AS1Q66K80 236 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 TMEM42Q69YG0 159 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 LAIR2Q6ISS4 152 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 ZNF841Q6ZN19 808 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 ZNF788Q6ZQV5 615 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 USP43Q70EL4 1123 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 UTS2BQ765I0 119 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 VMO1Q7Z5L0 202 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 ZNF561Q8N587 486 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 SIGLECL1Q8N7X8 197 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 DNAAF1Q8NEP3 725 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 OR52N4Q8NGI2 321 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 OR5D13Q8NGL4 314 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 OR52N1Q8NH53 320 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 ANGPTL6Q8NI99 470 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 FAM110DQ8TAY7 271 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-231ENST00000554994 NEK7Q8TDX7 302 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 UFD1Q92890 307 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 C10orf35Q96D05 121 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 WDFY2Q96P53 400 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 GAFA1Q96PS6 74 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 OR5M11Q96RB7 305 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 ZNF649Q9BS31 505 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 PKIBQ9C010 78 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 CHST6Q9GZX3 395 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 SLITRK2Q9H156 845 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 METTL9Q9H1A3 318 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 TLNRD1Q9H1K6 362 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 EXOSC4Q9NPD3 245 aaKnown RBP3.82□□□□□ -1.8
ATXN3-231ENST00000554994 SIRT7Q9NRC8 400 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 RBFOX1Q9NWB1 397 aaKnown RBP3.82□□□□□ -1.8
ATXN3-231ENST00000554994 ZNF69Q9UC07 566 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 RPUSD1Q9UJJ7 312 aaKnown RBP3.82□□□□□ -1.8
ATXN3-231ENST00000554994 NUP50Q9UKX7 468 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 BLOC1S6Q9UL45 172 aa3.82□□□□□ -1.8
ATXN3-231ENST00000554994 TRAV40A0A0B4J280 105 aa3.81□□□□□ -1.8
ATXN3-231ENST00000554994 hCG_1809904A0A1W2PP81 198 aa3.81□□□□□ -1.8
ATXN3-231ENST00000554994 A0A1W2PPE2 198 aa3.81□□□□□ -1.8
ATXN3-231ENST00000554994 A0A1W2PPH5 198 aa3.81□□□□□ -1.8
ATXN3-231ENST00000554994 A0A1W2PR64 198 aa3.81□□□□□ -1.8
ATXN3-231ENST00000554994 A0A1W2PRV1 198 aa3.81□□□□□ -1.8
ATXN3-231ENST00000554994 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-231ENST00000554994 M0QZ24 198 aa3.81□□□□□ -1.8
ATXN3-231ENST00000554994 TNFRSF13BO14836 293 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-231ENST00000554994 SIGLEC5O15389 551 aa3.81□□□□□ -1.8
ATXN3-231ENST00000554994 CRTAPO75718 401 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-231ENST00000554994 PAHP00439 452 aa3.81□□□□□ -1.8
ATXN3-231ENST00000554994 TK1P04183 234 aa3.81□□□□□ -1.8
ATXN3-231ENST00000554994 CRYBA1P05813 215 aa3.81□□□□□ -1.8
ATXN3-231ENST00000554994 IGHV4-38-2P0DP08 117 aa3.81□□□□□ -1.8
ATXN3-231ENST00000554994 PF4V1P10720 104 aa3.81□□□□□ -1.8
ATXN3-231ENST00000554994 MDKP21741 143 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-231ENST00000554994 OMGP23515 440 aa3.81□□□□□ -1.8
ATXN3-231ENST00000554994 CPT2P23786 658 aa3.81□□□□□ -1.8
ATXN3-231ENST00000554994 COX7A1P24310 79 aa3.81□□□□□ -1.8
ATXN3-231ENST00000554994 CRHBPP24387 322 aa3.81□□□□□ -1.8
ATXN3-231ENST00000554994 CFHR2P36980 270 aa3.81□□□□□ -1.8
ATXN3-231ENST00000554994 PTGFRP43088 359 aa3.81□□□□□ -1.8
ATXN3-231ENST00000554994 OR3A4PP47883 348 aa3.81□□□□□ -1.8
ATXN3-231ENST00000554994 LGALS4P56470 323 aa3.81□□□□□ -1.8
ATXN3-231ENST00000554994 RPL31P62899 125 aaKnown RBP3.81□□□□□ -1.8
ATXN3-231ENST00000554994 AESQ08117 197 aa3.81□□□□□ -1.8
ATXN3-231ENST00000554994 KLRD1Q13241 179 aa3.81□□□□□ -1.8
ATXN3-231ENST00000554994 DYNC1I2Q13409 638 aaKnown RBP3.81□□□□□ -1.8
ATXN3-231ENST00000554994 INSL4Q14641 139 aa3.81□□□□□ -1.8
ATXN3-231ENST00000554994 LTC4SQ16873 150 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms