RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 RNF2Q99496 336 aa12.29□□□□□ -0.44
VTI1B-204ENST00000554659 LPAR5Q9H1C0 372 aa12.29□□□□□ -0.44
VTI1B-204ENST00000554659 ARRDC1-AS1Q9H2J1 176 aa12.29□□□□□ -0.44
VTI1B-204ENST00000554659 VAX2Q9UIW0 290 aa12.29□□□□□ -0.44
VTI1B-204ENST00000554659 CDRT15L2A8MXV6 281 aa12.28□□□□□ -0.44
VTI1B-204ENST00000554659 MKRN2OSH3BPM6 223 aa12.28□□□□□ -0.44
VTI1B-204ENST00000554659 CRYABP02511 175 aaKnown RBP12.28□□□□□ -0.44
VTI1B-204ENST00000554659 TMEM211Q6ICI0 200 aa12.28□□□□□ -0.44
VTI1B-204ENST00000554659 TMEM251Q8N6I4 163 aa12.28□□□□□ -0.44
VTI1B-204ENST00000554659 ZNF383Q8NA42 475 aa12.28□□□□□ -0.44
VTI1B-204ENST00000554659 MEGF10Q96KG7 1140 aa12.28□□□□□ -0.44
VTI1B-204ENST00000554659 IL17BQ9UHF5 180 aa12.28□□□□□ -0.44
VTI1B-204ENST00000554659 ADAD2Q8NCV1 583 aaKnown RBP12.28□□□□□ -0.44
VTI1B-204ENST00000554659 ADTRPQ96IZ2 230 aa12.28□□□□□ -0.44
VTI1B-204ENST00000554659 GHITMQ9H3K2 345 aa12.28□□□□□ -0.44
VTI1B-204ENST00000554659 PRSS50Q9UI38 385 aa12.28□□□□□ -0.44
VTI1B-204ENST00000554659 FOCADQ5VW36 1801 aa12.28□□□□□ -0.44
VTI1B-204ENST00000554659 M0QZK8 103 aa12.28□□□□□ -0.44
VTI1B-204ENST00000554659 GGCTO75223 188 aaKnown RBP12.28□□□□□ -0.44
VTI1B-204ENST00000554659 RPS4Y1P22090 263 aaKnown RBP12.28□□□□□ -0.44
VTI1B-204ENST00000554659 EWSR1Q01844 656 aaKnown RBP eCLIP12.28□□□□□ -0.44
VTI1B-204ENST00000554659 ZNF784Q8NCA9 323 aaPredicted RBP12.28□□□□□ -0.44
VTI1B-204ENST00000554659 OR10G8Q8NGN5 311 aa12.28□□□□□ -0.44
VTI1B-204ENST00000554659 LRRC29Q8WV35 223 aa12.28□□□□□ -0.44
VTI1B-204ENST00000554659 CXXC4Q9H2H0 198 aa12.28□□□□□ -0.44
VTI1B-204ENST00000554659 TMEM167BQ9NRX6 74 aa12.28□□□□□ -0.44
VTI1B-204ENST00000554659 ZNF716A6NP11 495 aa12.28□□□□□ -0.44
VTI1B-204ENST00000554659 GEMIN2O14893 280 aaKnown RBP12.28□□□□□ -0.44
VTI1B-204ENST00000554659 PATE4P0C8F1 98 aa12.28□□□□□ -0.44
VTI1B-204ENST00000554659 DLK1P80370 383 aa12.28□□□□□ -0.44
VTI1B-204ENST00000554659 TMEM65Q6PI78 240 aa12.28□□□□□ -0.44
VTI1B-204ENST00000554659 STARD4Q96DR4 205 aa12.28□□□□□ -0.44
VTI1B-204ENST00000554659 GAL3ST2Q9H3Q3 398 aa12.28□□□□□ -0.44
VTI1B-204ENST00000554659 EPHA8P29322 1005 aaPredicted RBP12.27□□□□□ -0.44
VTI1B-204ENST00000554659 G6PCP35575 357 aa12.27□□□□□ -0.44
VTI1B-204ENST00000554659 RPS4XP62701 263 aaKnown RBP12.27□□□□□ -0.44
VTI1B-204ENST00000554659 FAM74A3Q4VXF1 159 aa12.27□□□□□ -0.44
VTI1B-204ENST00000554659 FDX2Q6P4F2 183 aa12.27□□□□□ -0.44
VTI1B-204ENST00000554659 ZNF880Q6PDB4 577 aa12.27□□□□□ -0.44
VTI1B-204ENST00000554659 PET117Q6UWS5 81 aa12.27□□□□□ -0.44
VTI1B-204ENST00000554659 RASL10BQ96S79 203 aa12.27□□□□□ -0.44
VTI1B-204ENST00000554659 A0A1W2PN81 502 aa12.27□□□□□ -0.45
VTI1B-204ENST00000554659 OR2T8A6NH00 312 aa12.27□□□□□ -0.45
VTI1B-204ENST00000554659 SHISA7A6NL88 538 aa12.27□□□□□ -0.45
VTI1B-204ENST00000554659 BCL3P20749 454 aa12.27□□□□□ -0.45
VTI1B-204ENST00000554659 EFNB2P52799 333 aa12.27□□□□□ -0.45
VTI1B-204ENST00000554659 NAAAQ02083 359 aa12.27□□□□□ -0.45
VTI1B-204ENST00000554659 HOGA1Q86XE5 327 aa12.27□□□□□ -0.45
VTI1B-204ENST00000554659 OR2M3Q8NG83 312 aa12.27□□□□□ -0.45
VTI1B-204ENST00000554659 OR10A7Q8NGE5 316 aa12.27□□□□□ -0.45
VTI1B-204ENST00000554659 OR4S2Q8NH73 311 aa12.27□□□□□ -0.45
VTI1B-204ENST00000554659 MRGPRDQ8TDS7 321 aa12.27□□□□□ -0.45
VTI1B-204ENST00000554659 AP5S1Q9NUS5 200 aa12.27□□□□□ -0.45
VTI1B-204ENST00000554659 IL36GQ9NZH8 169 aa12.27□□□□□ -0.45
VTI1B-204ENST00000554659 OR6C3Q9NZP0 311 aa12.27□□□□□ -0.45
VTI1B-204ENST00000554659 SIRT4Q9Y6E7 314 aaPredicted RBP12.27□□□□□ -0.45
VTI1B-204ENST00000554659 K7EQS6 105 aa12.27□□□□□ -0.45
VTI1B-204ENST00000554659 TMIGD3P0DMS9 266 aaPredicted RBP12.27□□□□□ -0.45
VTI1B-204ENST00000554659 C1orf53Q5VUE5 145 aa12.27□□□□□ -0.45
VTI1B-204ENST00000554659 GAPTQ8N292 157 aa12.27□□□□□ -0.45
VTI1B-204ENST00000554659 PTPMT1Q8WUK0 201 aaPredicted RBP12.27□□□□□ -0.45
VTI1B-204ENST00000554659 VSIG4Q9Y279 399 aa12.27□□□□□ -0.45
VTI1B-204ENST00000554659 HRKO00198 91 aa12.27□□□□□ -0.45
VTI1B-204ENST00000554659 ANKRD34CP0C6C1 535 aa12.27□□□□□ -0.45
VTI1B-204ENST00000554659 STAG3L2P0CL84 134 aa12.27□□□□□ -0.45
VTI1B-204ENST00000554659 SUCLG1P53597 346 aaKnown RBP12.27□□□□□ -0.45
VTI1B-204ENST00000554659 UBE2L3P68036 154 aaKnown RBP12.27□□□□□ -0.45
VTI1B-204ENST00000554659 MPV17LQ2QL34 196 aa12.27□□□□□ -0.45
VTI1B-204ENST00000554659 FBXO17Q96EF6 278 aa12.27□□□□□ -0.45
VTI1B-204ENST00000554659 RAB33BQ9H082 229 aa12.27□□□□□ -0.45
VTI1B-204ENST00000554659 CRXO43186 299 aaPredicted RBP12.26□□□□□ -0.45
VTI1B-204ENST00000554659 RPLP1P05386 114 aaKnown RBP12.26□□□□□ -0.45
VTI1B-204ENST00000554659 ORM2P19652 201 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 OVCH2Q7RTZ1 564 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 OR5AU1Q8NGC0 362 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 GPX7Q96SL4 187 aaPredicted RBP12.26□□□□□ -0.45
VTI1B-204ENST00000554659 NPAS1Q99742 590 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 CHST5Q9GZS9 411 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 FUT9Q9Y231 359 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 IGHV3-43A0A0B4J1X8 118 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 ACTL6AO96019 429 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 CRYBA1P05813 215 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 SP1P08047 785 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 IGHV3-43DP0DP04 118 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 CCL2P13500 99 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 CHAC2Q8WUX2 184 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 ANGPTL4Q9BY76 406 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 MS4A7Q9GZW8 240 aaPredicted RBP12.26□□□□□ -0.45
VTI1B-204ENST00000554659 WNT16Q9UBV4 365 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 UFC1Q9Y3C8 167 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 C11orf94C9JXX5 98 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 MELTFP08582 738 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 SLC35E4Q6ICL7 350 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 OR5A2Q8NGI9 324 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 ABHD14AQ9BUJ0 271 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 ZNF552Q9H707 407 aaPredicted RBP12.26□□□□□ -0.45
VTI1B-204ENST00000554659 hADV38S2A0JD32 116 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 SEMA7AO75326 666 aa12.26□□□□□ -0.45
VTI1B-204ENST00000554659 NANOS3P60323 173 aaKnown RBP12.26□□□□□ -0.45
VTI1B-204ENST00000554659 DGAT2L7PQ6IED9 249 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms