RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 OR4D5Q8NGN0 318 aa12.5□□□□□ -0.41
ACTN1-211ENST00000553882 TMEM222Q9H0R3 208 aa12.5□□□□□ -0.41
ACTN1-211ENST00000553882 ARV1Q9H2C2 271 aa12.5□□□□□ -0.41
ACTN1-211ENST00000553882 FOXJ2Q9P0K8 574 aa12.5□□□□□ -0.41
ACTN1-211ENST00000553882 TECTAO75443 2155 aa12.49□□□□□ -0.41
ACTN1-211ENST00000553882 HSD17B6O14756 317 aa12.49□□□□□ -0.41
ACTN1-211ENST00000553882 SYNGR1O43759 233 aa12.49□□□□□ -0.41
ACTN1-211ENST00000553882 SSSCA1O60232 199 aa12.49□□□□□ -0.41
ACTN1-211ENST00000553882 SEC11BP0C7V7 166 aa12.49□□□□□ -0.41
ACTN1-211ENST00000553882 CLDN18P56856 261 aa12.49□□□□□ -0.41
ACTN1-211ENST00000553882 EWSR1Q01844 656 aaKnown RBP eCLIP12.49□□□□□ -0.41
ACTN1-211ENST00000553882 TGIF1Q15583 401 aa12.49□□□□□ -0.41
ACTN1-211ENST00000553882 GUK1Q16774 197 aa12.49□□□□□ -0.41
ACTN1-211ENST00000553882 ABHD17BQ5VST6 288 aa12.49□□□□□ -0.41
ACTN1-211ENST00000553882 ZDHHC23Q8IYP9 409 aa12.49□□□□□ -0.41
ACTN1-211ENST00000553882 ZNF565Q8N9K5 539 aa12.49□□□□□ -0.41
ACTN1-211ENST00000553882 TMEM45BQ96B21 275 aa12.49□□□□□ -0.41
ACTN1-211ENST00000553882 BOD1Q96IK1 185 aa12.49□□□□□ -0.41
ACTN1-211ENST00000553882 CLCC1Q96S66 551 aa12.49□□□□□ -0.41
ACTN1-211ENST00000553882 GINS3Q9BRX5 216 aa12.49□□□□□ -0.41
ACTN1-211ENST00000553882 RPS10P5Q9NQ39 176 aa12.49□□□□□ -0.41
ACTN1-211ENST00000553882 POMT1Q9Y6A1 747 aa12.49□□□□□ -0.41
ACTN1-211ENST00000553882 C9orf172C9J069 976 aa12.49□□□□□ -0.41
ACTN1-211ENST00000553882 LILRA1O75019 489 aa12.49□□□□□ -0.41
ACTN1-211ENST00000553882 ACP1P24666 158 aa12.49□□□□□ -0.41
ACTN1-211ENST00000553882 CXorf66Q5JRM2 361 aaPredicted RBP12.49□□□□□ -0.41
ACTN1-211ENST00000553882 AVPI1Q5T686 147 aa12.49□□□□□ -0.41
ACTN1-211ENST00000553882 VASH2Q86V25 355 aa12.49□□□□□ -0.41
ACTN1-211ENST00000553882 C14orf79Q96F83 325 aa12.49□□□□□ -0.41
ACTN1-211ENST00000553882 FAM173AQ9BQD7 235 aa12.49□□□□□ -0.41
ACTN1-211ENST00000553882 Q9N2K0 584 aa12.49□□□□□ -0.41
ACTN1-211ENST00000553882 C19orf12Q9NSK7 152 aa12.49□□□□□ -0.41
ACTN1-211ENST00000553882 COLQQ9Y215 455 aaPredicted RBP12.49□□□□□ -0.41
ACTN1-211ENST00000553882 MRPS18CQ9Y3D5 142 aaKnown RBP12.49□□□□□ -0.41
ACTN1-211ENST00000553882 FBXO7Q9Y3I1 522 aa12.49□□□□□ -0.41
ACTN1-211ENST00000553882 ESPL1Q14674 2120 aa12.48□□□□□ -0.41
ACTN1-211ENST00000553882 IGKV3D-15A0A087WSY6 115 aa12.48□□□□□ -0.41
ACTN1-211ENST00000553882 ADAM20O43506 726 aa12.48□□□□□ -0.41
ACTN1-211ENST00000553882 DAOP14920 347 aa12.48□□□□□ -0.41
ACTN1-211ENST00000553882 ITGA3P26006 1051 aa12.48□□□□□ -0.41
ACTN1-211ENST00000553882 NKX2-1P43699 371 aaPredicted RBP12.48□□□□□ -0.41
ACTN1-211ENST00000553882 FGF12P61328 243 aa12.48□□□□□ -0.41
ACTN1-211ENST00000553882 RAB1AP62820 205 aa12.48□□□□□ -0.41
ACTN1-211ENST00000553882 OR2C3Q8N628 320 aa12.48□□□□□ -0.41
ACTN1-211ENST00000553882 FAM213BQ8TBF2 198 aa12.48□□□□□ -0.41
ACTN1-211ENST00000553882 TRDCB7Z8K6 153 aa12.48□□□□□ -0.41
ACTN1-211ENST00000553882 HS3ST1O14792 307 aa12.48□□□□□ -0.41
ACTN1-211ENST00000553882 HEXAP06865 529 aa12.48□□□□□ -0.41
ACTN1-211ENST00000553882 SNRNP70P08621 437 aaKnown RBP12.48□□□□□ -0.41
ACTN1-211ENST00000553882 PPP1CCP36873 323 aaKnown RBP12.48□□□□□ -0.41
ACTN1-211ENST00000553882 OR1C1Q15619 314 aa12.48□□□□□ -0.41
ACTN1-211ENST00000553882 CEACAM21Q3KPI0 293 aa12.48□□□□□ -0.41
ACTN1-211ENST00000553882 ISOC2Q96AB3 205 aa12.48□□□□□ -0.41
ACTN1-211ENST00000553882 IP6K3Q96PC2 410 aa12.48□□□□□ -0.41
ACTN1-211ENST00000553882 TTTY12Q9BZ98 90 aa12.48□□□□□ -0.41
ACTN1-211ENST00000553882 ESRP2Q9H6T0 727 aaKnown RBP12.48□□□□□ -0.41
ACTN1-211ENST00000553882 SPACA1Q9HBV2 294 aa12.48□□□□□ -0.41
ACTN1-211ENST00000553882 FAM86C1Q9NVL1 165 aa12.48□□□□□ -0.41
ACTN1-211ENST00000553882 IGKV1-6A0A0C4DH72 117 aa12.47□□□□□ -0.41
ACTN1-211ENST00000553882 IGSF23A1L1A6 192 aa12.47□□□□□ -0.41
ACTN1-211ENST00000553882 SLC22A20A6NK97 555 aa12.47□□□□□ -0.41
ACTN1-211ENST00000553882 COLCA2A8K830 154 aa12.47□□□□□ -0.41
ACTN1-211ENST00000553882 TRAPPC2LH3BP13 241 aa12.47□□□□□ -0.41
ACTN1-211ENST00000553882 M0R036 132 aa12.47□□□□□ -0.41
ACTN1-211ENST00000553882 SYNGR4O95473 234 aa12.47□□□□□ -0.41
ACTN1-211ENST00000553882 NAPSAO96009 420 aa12.47□□□□□ -0.41
ACTN1-211ENST00000553882 AWAT1Q58HT5 328 aa12.47□□□□□ -0.41
ACTN1-211ENST00000553882 C20orf204Q6ZNR8 217 aa12.47□□□□□ -0.41
ACTN1-211ENST00000553882 C17orf78Q8N4C9 275 aa12.47□□□□□ -0.41
ACTN1-211ENST00000553882 TMEM217Q8N7C4 229 aa12.47□□□□□ -0.41
ACTN1-211ENST00000553882 RDH5Q92781 318 aa12.47□□□□□ -0.41
ACTN1-211ENST00000553882 CCL28Q9NRJ3 127 aa12.47□□□□□ -0.41
ACTN1-211ENST00000553882 B4GALT7Q9UBV7 327 aa12.47□□□□□ -0.41
ACTN1-211ENST00000553882 KPTNQ9Y664 436 aa12.47□□□□□ -0.41
ACTN1-211ENST00000553882 GPR37O15354 613 aa12.47□□□□□ -0.41
ACTN1-211ENST00000553882 CST7O76096 145 aa12.47□□□□□ -0.41
ACTN1-211ENST00000553882 BOD1L1Q8NFC6 3051 aa12.47□□□□□ -0.41
ACTN1-211ENST00000553882 APOBEC3DQ96AK3 386 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-211ENST00000553882 APH1AQ96BI3 265 aa12.47□□□□□ -0.41
ACTN1-211ENST00000553882 TAAR9Q96RI9 348 aa12.47□□□□□ -0.41
ACTN1-211ENST00000553882 SCRT1Q9BWW7 348 aa12.47□□□□□ -0.41
ACTN1-211ENST00000553882 C12orf49Q9H741 205 aa12.47□□□□□ -0.41
ACTN1-211ENST00000553882 BDP1A6H8Y1 2624 aa12.47□□□□□ -0.41
ACTN1-211ENST00000553882 A0A1W2PNU3 283 aaPredicted RBP12.46□□□□□ -0.41
ACTN1-211ENST00000553882 CDRT15L2A8MXV6 281 aa12.46□□□□□ -0.41
ACTN1-211ENST00000553882 NRN1LQ496H8 165 aa12.46□□□□□ -0.41
ACTN1-211ENST00000553882 LILRB1Q8NHL6 650 aaPredicted RBP12.46□□□□□ -0.41
ACTN1-211ENST00000553882 TMEM171Q8WVE6 324 aa12.46□□□□□ -0.41
ACTN1-211ENST00000553882 ABHD14AQ9BUJ0 271 aa12.46□□□□□ -0.41
ACTN1-211ENST00000553882 STRADBQ9C0K7 418 aa12.46□□□□□ -0.41
ACTN1-211ENST00000553882 SMCO4Q9NRQ5 59 aa12.46□□□□□ -0.41
ACTN1-211ENST00000553882 PLSCR2Q9NRY7 297 aa12.46□□□□□ -0.41
ACTN1-211ENST00000553882 CDS2O95674 445 aa12.46□□□□□ -0.42
ACTN1-211ENST00000553882 ZNF44P15621 663 aa12.46□□□□□ -0.42
ACTN1-211ENST00000553882 PLGLB1Q02325 96 aa12.46□□□□□ -0.42
ACTN1-211ENST00000553882 SPATA46Q5T0L3 261 aa12.46□□□□□ -0.42
ACTN1-211ENST00000553882 MED12LQ86YW9 2145 aa12.46□□□□□ -0.42
ACTN1-211ENST00000553882 MKXQ8IYA7 352 aa12.46□□□□□ -0.42
ACTN1-211ENST00000553882 SELENOHQ8IZQ5 122 aaKnown RBP12.46□□□□□ -0.42
ACTN1-211ENST00000553882 LILRB2Q8N423 598 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms