RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 RFESDQ8TAC1 157 aa14.63□□□□□ -0.07
SHMT2-206ENST00000553529 MRGPRDQ8TDS7 321 aa14.63□□□□□ -0.07
SHMT2-206ENST00000553529 MALSU1Q96EH3 234 aa14.63□□□□□ -0.07
SHMT2-206ENST00000553529 ZNF281Q9Y2X9 895 aa14.63□□□□□ -0.07
SHMT2-206ENST00000553529 EXOSC1Q9Y3B2 195 aaKnown RBP14.63□□□□□ -0.07
SHMT2-206ENST00000553529 CASQ2O14958 399 aaPredicted RBP14.62□□□□□ -0.07
SHMT2-206ENST00000553529 PIN1P1O15428 100 aa14.62□□□□□ -0.07
SHMT2-206ENST00000553529 CGB3P0DN86 165 aa14.62□□□□□ -0.07
SHMT2-206ENST00000553529 CGB7P0DN87 165 aa14.62□□□□□ -0.07
SHMT2-206ENST00000553529 CD28P10747 220 aa14.62□□□□□ -0.07
SHMT2-206ENST00000553529 MYL12AP19105 171 aa14.62□□□□□ -0.07
SHMT2-206ENST00000553529 NFYBP25208 207 aa14.62□□□□□ -0.07
SHMT2-206ENST00000553529 SSTR5P35346 364 aa14.62□□□□□ -0.07
SHMT2-206ENST00000553529 VHLP40337 213 aa14.62□□□□□ -0.07
SHMT2-206ENST00000553529 KIR2DS4P43632 304 aa14.62□□□□□ -0.07
SHMT2-206ENST00000553529 MTNR1BP49286 362 aa14.62□□□□□ -0.07
SHMT2-206ENST00000553529 RBM39Q14498 530 aaKnown RBP14.62□□□□□ -0.07
SHMT2-206ENST00000553529 AANATQ16613 207 aa14.62□□□□□ -0.07
SHMT2-206ENST00000553529 CCDC58Q4VC31 144 aa14.62□□□□□ -0.07
SHMT2-206ENST00000553529 RSBN1Q5VWQ0 802 aaPredicted RBP14.62□□□□□ -0.07
SHMT2-206ENST00000553529 ELP2Q6IA86 826 aa14.62□□□□□ -0.07
SHMT2-206ENST00000553529 HEPN1Q6WQI6 88 aa14.62□□□□□ -0.07
SHMT2-206ENST00000553529 TMPRSS11AQ6ZMR5 421 aa14.62□□□□□ -0.07
SHMT2-206ENST00000553529 C5orf24Q7Z6I8 188 aa14.62□□□□□ -0.07
SHMT2-206ENST00000553529 PACRGLQ8N7B6 248 aa14.62□□□□□ -0.07
SHMT2-206ENST00000553529 PXT1Q8NFP0 134 aa14.62□□□□□ -0.07
SHMT2-206ENST00000553529 OR51T1Q8NGJ9 327 aa14.62□□□□□ -0.07
SHMT2-206ENST00000553529 FBLIM1Q8WUP2 373 aa14.62□□□□□ -0.07
SHMT2-206ENST00000553529 CORO2AQ92828 525 aa14.62□□□□□ -0.07
SHMT2-206ENST00000553529 WNK1Q9H4A3 2382 aa14.62□□□□□ -0.07
SHMT2-206ENST00000553529 MEIKINA0A087WXM9 373 aa14.61□□□□□ -0.07
SHMT2-206ENST00000553529 M0QZ24 198 aa14.61□□□□□ -0.07
SHMT2-206ENST00000553529 F2RL2O00254 374 aa14.61□□□□□ -0.07
SHMT2-206ENST00000553529 GEMIN2O14893 280 aaKnown RBP14.61□□□□□ -0.07
SHMT2-206ENST00000553529 IGLV1-47P01700 117 aa14.61□□□□□ -0.07
SHMT2-206ENST00000553529 ZNF93P35789 620 aaPredicted RBP14.61□□□□□ -0.07
SHMT2-206ENST00000553529 PTGFRP43088 359 aa14.61□□□□□ -0.07
SHMT2-206ENST00000553529 RSU1Q15404 277 aa14.61□□□□□ -0.07
SHMT2-206ENST00000553529 ASCL4Q6XD76 172 aa14.61□□□□□ -0.07
SHMT2-206ENST00000553529 C8orf59Q8N0T1 100 aaPredicted RBP14.61□□□□□ -0.07
SHMT2-206ENST00000553529 SUMF2Q8NBJ7 301 aa14.61□□□□□ -0.07
SHMT2-206ENST00000553529 OR52N1Q8NH53 320 aa14.61□□□□□ -0.07
SHMT2-206ENST00000553529 KIRREL1Q96J84 757 aa14.61□□□□□ -0.07
SHMT2-206ENST00000553529 ZNF184Q99676 751 aaPredicted RBP14.61□□□□□ -0.07
SHMT2-206ENST00000553529 NPFFR1Q9GZQ6 430 aa14.61□□□□□ -0.07
SHMT2-206ENST00000553529 ABCB10Q9NRK6 738 aa14.61□□□□□ -0.07
SHMT2-206ENST00000553529 PAK1IP1Q9NWT1 392 aaPredicted RBP14.61□□□□□ -0.07
SHMT2-206ENST00000553529 PSORS1C1Q9UIG5 152 aa14.61□□□□□ -0.07
SHMT2-206ENST00000553529 CSN2P05814 226 aa14.6□□□□□ -0.07
SHMT2-206ENST00000553529 BDKRB2P30411 391 aa14.6□□□□□ -0.07
SHMT2-206ENST00000553529 GNG10P50151 68 aa14.6□□□□□ -0.07
SHMT2-206ENST00000553529 FAM27D1Q5T7N8 215 aa14.6□□□□□ -0.07
SHMT2-206ENST00000553529 C10orf99Q6UWK7 81 aa14.6□□□□□ -0.07
SHMT2-206ENST00000553529 SETD9Q8NE22 299 aa14.6□□□□□ -0.07
SHMT2-206ENST00000553529 OR2T6Q8NHC8 308 aa14.6□□□□□ -0.07
SHMT2-206ENST00000553529 MUL1Q969V5 352 aa14.6□□□□□ -0.07
SHMT2-206ENST00000553529 MMP27Q9H306 513 aa14.6□□□□□ -0.07
SHMT2-206ENST00000553529 GAL3ST2Q9H3Q3 398 aa14.6□□□□□ -0.07
SHMT2-206ENST00000553529 CALYQ9NYX4 217 aa14.6□□□□□ -0.07
SHMT2-206ENST00000553529 ST3GAL6Q9Y274 331 aa14.6□□□□□ -0.07
SHMT2-206ENST00000553529 TRBV5-7A0A0A0MS05 114 aa14.59□□□□□ -0.07
SHMT2-206ENST00000553529 TIMM23O14925 209 aa14.59□□□□□ -0.07
SHMT2-206ENST00000553529 MAS1P04201 325 aa14.59□□□□□ -0.07
SHMT2-206ENST00000553529 HTR1DP28221 377 aa14.59□□□□□ -0.07
SHMT2-206ENST00000553529 AQP4P55087 323 aa14.59□□□□□ -0.07
SHMT2-206ENST00000553529 RBM11P57052 281 aaKnown RBP14.59□□□□□ -0.07
SHMT2-206ENST00000553529 RIPK1Q13546 671 aa14.59□□□□□ -0.07
SHMT2-206ENST00000553529 HERPUD1Q15011 391 aa14.59□□□□□ -0.07
SHMT2-206ENST00000553529 HLA-DRB5Q30154 266 aa14.59□□□□□ -0.07
SHMT2-206ENST00000553529 SLC22A6Q4U2R8 563 aa14.59□□□□□ -0.07
SHMT2-206ENST00000553529 MINOS1Q5TGZ0 78 aa14.59□□□□□ -0.07
SHMT2-206ENST00000553529 RTN4RL2Q86UN3 420 aa14.59□□□□□ -0.07
SHMT2-206ENST00000553529 CHST4Q8NCG5 386 aa14.59□□□□□ -0.07
SHMT2-206ENST00000553529 Q8NFD4 153 aa14.59□□□□□ -0.07
SHMT2-206ENST00000553529 CCDC107Q8WV48 283 aa14.59□□□□□ -0.07
SHMT2-206ENST00000553529 DPCDQ9BVM2 203 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-206ENST00000553529 KCNK15Q9H427 330 aa14.59□□□□□ -0.07
SHMT2-206ENST00000553529 TMEM138Q9NPI0 162 aa14.59□□□□□ -0.07
SHMT2-206ENST00000553529 FKBP14Q9NWM8 211 aa14.59□□□□□ -0.07
SHMT2-206ENST00000553529 TAS2R3Q9NYW6 316 aa14.59□□□□□ -0.07
SHMT2-206ENST00000553529 PCDHGB5Q9Y5G0 923 aa14.59□□□□□ -0.07
SHMT2-206ENST00000553529 MINOS1-NBL1R4GNA1 71 aa14.59□□□□□ -0.07
SHMT2-206ENST00000553529 KBTBD11-OT1A0A1B0GTJ5 212 aa14.58□□□□□ -0.08
SHMT2-206ENST00000553529 FAM90A22PA8MWA6 464 aa14.58□□□□□ -0.08
SHMT2-206ENST00000553529 LY6LH3BQJ8 138 aa14.58□□□□□ -0.08
SHMT2-206ENST00000553529 MAGEB3O15480 346 aa14.58□□□□□ -0.08
SHMT2-206ENST00000553529 CD2P06729 351 aa14.58□□□□□ -0.08
SHMT2-206ENST00000553529 GP2P55259 537 aaKnown RBP14.58□□□□□ -0.08
SHMT2-206ENST00000553529 PPP3R1P63098 170 aa14.58□□□□□ -0.08
SHMT2-206ENST00000553529 IL13RA2Q14627 380 aa14.58□□□□□ -0.08
SHMT2-206ENST00000553529 NSUN5P1Q3KNT7 163 aa14.58□□□□□ -0.08
SHMT2-206ENST00000553529 Q499Y3 187 aa14.58□□□□□ -0.08
SHMT2-206ENST00000553529 TPTE2P1Q5T6R2 138 aa14.58□□□□□ -0.08
SHMT2-206ENST00000553529 OSR2Q8N2R0 312 aa14.58□□□□□ -0.08
SHMT2-206ENST00000553529 OR4D6Q8NGJ1 314 aa14.58□□□□□ -0.08
SHMT2-206ENST00000553529 CFHR4Q92496 578 aa14.58□□□□□ -0.08
SHMT2-206ENST00000553529 TFAP2CQ92754 450 aa14.58□□□□□ -0.08
SHMT2-206ENST00000553529 BANF2Q9H503 90 aa14.58□□□□□ -0.08
SHMT2-206ENST00000553529 RANBP3Q9H6Z4 567 aaPredicted RBP14.58□□□□□ -0.08
SHMT2-206ENST00000553529 IGHV3-43A0A0B4J1X8 118 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms