RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 SSX3Q99909 188 aa15.59■□□□□ 0.09
PTCH1-227ENST00000553256 C16orf95Q9H693 158 aa15.59■□□□□ 0.09
PTCH1-227ENST00000553256 TBL2Q9Y4P3 447 aaKnown RBP15.59■□□□□ 0.09
PTCH1-227ENST00000553256 KIAA2026Q5HYC2 2103 aa15.59■□□□□ 0.09
PTCH1-227ENST00000553256 H3BUX3 64 aa15.58■□□□□ 0.08
PTCH1-227ENST00000553256 PAHP00439 452 aa15.58■□□□□ 0.08
PTCH1-227ENST00000553256 IGLV1-47P01700 117 aa15.58■□□□□ 0.08
PTCH1-227ENST00000553256 SCN1BQ07699 218 aa15.58■□□□□ 0.08
PTCH1-227ENST00000553256 TPBGQ13641 420 aa15.58■□□□□ 0.08
PTCH1-227ENST00000553256 ATXN7L3Q14CW9 347 aaPredicted RBP15.58■□□□□ 0.08
PTCH1-227ENST00000553256 RSU1Q15404 277 aa15.58■□□□□ 0.08
PTCH1-227ENST00000553256 LRRC75BQ2VPJ9 315 aa15.58■□□□□ 0.08
PTCH1-227ENST00000553256 KRBOX4Q5JUW0 171 aa15.58■□□□□ 0.08
PTCH1-227ENST00000553256 FAM27D1Q5T7N8 215 aa15.58■□□□□ 0.08
PTCH1-227ENST00000553256 GDPGP1Q6ZNW5 385 aa15.58■□□□□ 0.08
PTCH1-227ENST00000553256 LRRTM1Q86UE6 522 aa15.58■□□□□ 0.08
PTCH1-227ENST00000553256 OR4D6Q8NGJ1 314 aa15.58■□□□□ 0.08
PTCH1-227ENST00000553256 WFDC12Q8WWY7 111 aa15.58■□□□□ 0.08
PTCH1-227ENST00000553256 METTL9Q9H1A3 318 aa15.58■□□□□ 0.08
PTCH1-227ENST00000553256 SCN3BQ9NY72 215 aa15.58■□□□□ 0.08
PTCH1-227ENST00000553256 RCC2Q9P258 522 aaKnown RBP15.58■□□□□ 0.08
PTCH1-227ENST00000553256 ST3GAL6Q9Y274 331 aa15.58■□□□□ 0.08
PTCH1-227ENST00000553256 TPRKBQ9Y3C4 175 aa15.58■□□□□ 0.08
PTCH1-227ENST00000553256 A0A1B0GUS0 222 aa15.57■□□□□ 0.08
PTCH1-227ENST00000553256 CLPSL1A2RUU4 121 aa15.57■□□□□ 0.08
PTCH1-227ENST00000553256 NPIPB11E5RHQ5 1161 aa15.57■□□□□ 0.08
PTCH1-227ENST00000553256 GEMIN2O14893 280 aaKnown RBP15.57■□□□□ 0.08
PTCH1-227ENST00000553256 HTR3BO95264 441 aa15.57■□□□□ 0.08
PTCH1-227ENST00000553256 PROK1P58294 105 aa15.57■□□□□ 0.08
PTCH1-227ENST00000553256 ACSM3Q53FZ2 586 aa15.57■□□□□ 0.08
PTCH1-227ENST00000553256 PRAMEF5Q5TYX0 476 aa15.57■□□□□ 0.08
PTCH1-227ENST00000553256 SHISA2Q6UWI4 295 aa15.57■□□□□ 0.08
PTCH1-227ENST00000553256 PRSS48Q7RTY5 328 aa15.57■□□□□ 0.08
PTCH1-227ENST00000553256 OSR2Q8N2R0 312 aa15.57■□□□□ 0.08
PTCH1-227ENST00000553256 MS4A15Q8N5U1 240 aa15.57■□□□□ 0.08
PTCH1-227ENST00000553256 OR13A1Q8NGR1 328 aa15.57■□□□□ 0.08
PTCH1-227ENST00000553256 OR4F5Q8NH21 305 aa15.57■□□□□ 0.08
PTCH1-227ENST00000553256 MALSU1Q96EH3 234 aa15.57■□□□□ 0.08
PTCH1-227ENST00000553256 CYYR1Q96J86 154 aa15.57■□□□□ 0.08
PTCH1-227ENST00000553256 NR1H4Q96RI1 486 aaPredicted RBP15.57■□□□□ 0.08
PTCH1-227ENST00000553256 FAM192AQ9GZU8 254 aa15.57■□□□□ 0.08
PTCH1-227ENST00000553256 VCX3BQ9H321 246 aa15.57■□□□□ 0.08
PTCH1-227ENST00000553256 ISYNA1Q9NPH2 558 aa15.57■□□□□ 0.08
PTCH1-227ENST00000553256 ING4Q9UNL4 249 aa15.57■□□□□ 0.08
PTCH1-227ENST00000553256 VWFP04275 2813 aa15.57■□□□□ 0.08
PTCH1-227ENST00000553256 TRGV10A0A0A0MS01 117 aa15.56■□□□□ 0.08
PTCH1-227ENST00000553256 FUOMA2VDF0 154 aa15.56■□□□□ 0.08
PTCH1-227ENST00000553256 HAX1O00165 279 aa15.56■□□□□ 0.08
PTCH1-227ENST00000553256 CHST1O43916 411 aa15.56■□□□□ 0.08
PTCH1-227ENST00000553256 ZNF780AO75290 641 aaPredicted RBP15.56■□□□□ 0.08
PTCH1-227ENST00000553256 ARG1P05089 322 aa15.56■□□□□ 0.08
PTCH1-227ENST00000553256 CDK2P24941 298 aa15.56■□□□□ 0.08
PTCH1-227ENST00000553256 KCNJ3P48549 501 aa15.56■□□□□ 0.08
PTCH1-227ENST00000553256 HSPA13P48723 471 aa15.56■□□□□ 0.08
PTCH1-227ENST00000553256 DYNLT3P51808 116 aa15.56■□□□□ 0.08
PTCH1-227ENST00000553256 PAN3Q58A45 887 aaKnown RBP15.56■□□□□ 0.08
PTCH1-227ENST00000553256 MINOS1Q5TGZ0 78 aa15.56■□□□□ 0.08
PTCH1-227ENST00000553256 OLFML2AQ68BL7 652 aa15.56■□□□□ 0.08
PTCH1-227ENST00000553256 CCBE1Q6UXH8 406 aaPredicted RBP15.56■□□□□ 0.08
PTCH1-227ENST00000553256 TMEM91Q6ZNR0 172 aa15.56■□□□□ 0.08
PTCH1-227ENST00000553256 SUMF2Q8NBJ7 301 aa15.56■□□□□ 0.08
PTCH1-227ENST00000553256 MUL1Q969V5 352 aa15.56■□□□□ 0.08
PTCH1-227ENST00000553256 BEX1Q9HBH7 125 aa15.56■□□□□ 0.08
PTCH1-227ENST00000553256 CKLFQ9UBR5 152 aa15.56■□□□□ 0.08
PTCH1-227ENST00000553256 KIF25Q9UIL4 384 aa15.56■□□□□ 0.08
PTCH1-227ENST00000553256 RAB26Q9ULW5 256 aa15.56■□□□□ 0.08
PTCH1-227ENST00000553256 MINOS1-NBL1R4GNA1 71 aa15.56■□□□□ 0.08
PTCH1-227ENST00000553256 KBTBD11-OT1A0A1B0GTJ5 212 aa15.55■□□□□ 0.08
PTCH1-227ENST00000553256 ZNF729A6NN14 1252 aaPredicted RBP15.55■□□□□ 0.08
PTCH1-227ENST00000553256 FAM90A22PA8MWA6 464 aa15.55■□□□□ 0.08
PTCH1-227ENST00000553256 LY6LH3BQJ8 138 aa15.55■□□□□ 0.08
PTCH1-227ENST00000553256 RGS10O43665 173 aa15.55■□□□□ 0.08
PTCH1-227ENST00000553256 MAS1P04201 325 aa15.55■□□□□ 0.08
PTCH1-227ENST00000553256 UCHL1P09936 223 aa15.55■□□□□ 0.08
PTCH1-227ENST00000553256 JUNBP17275 347 aaPredicted RBP15.55■□□□□ 0.08
PTCH1-227ENST00000553256 MPV17LQ2QL34 196 aa15.55■□□□□ 0.08
PTCH1-227ENST00000553256 GLIPR1L1Q6UWM5 242 aa15.55■□□□□ 0.08
PTCH1-227ENST00000553256 LINC00596Q86U02 117 aa15.55■□□□□ 0.08
PTCH1-227ENST00000553256 GAPTQ8N292 157 aa15.55■□□□□ 0.08
PTCH1-227ENST00000553256 TMEM104Q8NE00 496 aa15.55■□□□□ 0.08
PTCH1-227ENST00000553256 THRSPQ92748 146 aa15.55■□□□□ 0.08
PTCH1-227ENST00000553256 KIRREL1Q96J84 757 aa15.55■□□□□ 0.08
PTCH1-227ENST00000553256 UQCC2Q9BRT2 126 aa15.55■□□□□ 0.08
PTCH1-227ENST00000553256 DPCDQ9BVM2 203 aaPredicted RBP15.55■□□□□ 0.08
PTCH1-227ENST00000553256 CLEC7AQ9BXN2 247 aa15.55■□□□□ 0.08
PTCH1-227ENST00000553256 GAL3ST2Q9H3Q3 398 aa15.55■□□□□ 0.08
PTCH1-227ENST00000553256 ZNF286AQ9HBT8 521 aa15.55■□□□□ 0.08
PTCH1-227ENST00000553256 HSPB6O14558 160 aa15.54■□□□□ 0.08
PTCH1-227ENST00000553256 SERPINA2P20848 420 aa15.54■□□□□ 0.08
PTCH1-227ENST00000553256 MAPK3P27361 379 aaPredicted RBP15.54■□□□□ 0.08
PTCH1-227ENST00000553256 SRSF4Q08170 494 aaKnown RBP15.54■□□□□ 0.08
PTCH1-227ENST00000553256 MED22Q15528 200 aa15.54■□□□□ 0.08
PTCH1-227ENST00000553256 SLC22A6Q4U2R8 563 aa15.54■□□□□ 0.08
PTCH1-227ENST00000553256 C1orf100Q5SVJ3 147 aa15.54■□□□□ 0.08
PTCH1-227ENST00000553256 SIGIRRQ6IA17 410 aa15.54■□□□□ 0.08
PTCH1-227ENST00000553256 NKAIN3Q8N8D7 197 aa15.54■□□□□ 0.08
PTCH1-227ENST00000553256 PHYHIPQ92561 330 aa15.54■□□□□ 0.08
PTCH1-227ENST00000553256 MRPS24Q96EL2 167 aaKnown RBP15.54■□□□□ 0.08
PTCH1-227ENST00000553256 GFI1Q99684 422 aa15.54■□□□□ 0.08
PTCH1-227ENST00000553256 CITED1Q99966 193 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms