RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 LHBP01229 141 aa16.45■□□□□ 0.22
RBFOX1-215ENST00000553186 CD3EP07766 207 aa16.45■□□□□ 0.22
RBFOX1-215ENST00000553186 ADH4P08319 380 aa16.45■□□□□ 0.22
RBFOX1-215ENST00000553186 SERPINF1P36955 418 aa16.45■□□□□ 0.22
RBFOX1-215ENST00000553186 TNFAIP6P98066 277 aaPredicted RBP16.45■□□□□ 0.22
RBFOX1-215ENST00000553186 ZNF880Q6PDB4 577 aa16.45■□□□□ 0.22
RBFOX1-215ENST00000553186 GAPTQ8N292 157 aa16.45■□□□□ 0.22
RBFOX1-215ENST00000553186 C5orf66Q9H5L9 145 aa16.45■□□□□ 0.22
RBFOX1-215ENST00000553186 DECR2Q9NUI1 292 aa16.45■□□□□ 0.22
RBFOX1-215ENST00000553186 ING3Q9NXR8 418 aa16.45■□□□□ 0.22
RBFOX1-215ENST00000553186 RASL12Q9NYN1 266 aa16.45■□□□□ 0.22
RBFOX1-215ENST00000553186 CACNA1BQ00975 2339 aa16.45■□□□□ 0.22
RBFOX1-215ENST00000553186 FPR2P25090 351 aa16.45■□□□□ 0.22
RBFOX1-215ENST00000553186 TLE1Q04724 770 aa16.45■□□□□ 0.22
RBFOX1-215ENST00000553186 ADAD2Q8NCV1 583 aaKnown RBP16.45■□□□□ 0.22
RBFOX1-215ENST00000553186 PLPPR1Q8TBJ4 325 aa16.45■□□□□ 0.22
RBFOX1-215ENST00000553186 DMRTB1Q96MA1 342 aa16.45■□□□□ 0.22
RBFOX1-215ENST00000553186 ZNF2Q9BSG1 426 aaPredicted RBP16.45■□□□□ 0.22
RBFOX1-215ENST00000553186 GCM1Q9NP62 436 aa16.45■□□□□ 0.22
RBFOX1-215ENST00000553186 CHD3Q12873 2000 aaKnown RBP16.45■□□□□ 0.22
RBFOX1-215ENST00000553186 RFPL4AA6NLU0 287 aa16.44■□□□□ 0.22
RBFOX1-215ENST00000553186 RFPL4AL1F8VTS6 287 aa16.44■□□□□ 0.22
RBFOX1-215ENST00000553186 ZNF205O95201 554 aa16.44■□□□□ 0.22
RBFOX1-215ENST00000553186 MDH2P40926 338 aaKnown RBP16.44■□□□□ 0.22
RBFOX1-215ENST00000553186 DHRS2Q13268 280 aa16.44■□□□□ 0.22
RBFOX1-215ENST00000553186 ZNF497Q6ZNH5 498 aa16.44■□□□□ 0.22
RBFOX1-215ENST00000553186 C5orf24Q7Z6I8 188 aa16.44■□□□□ 0.22
RBFOX1-215ENST00000553186 ZNF431Q8TF32 576 aaPredicted RBP16.44■□□□□ 0.22
RBFOX1-215ENST00000553186 GLS2Q9UI32 602 aa16.44■□□□□ 0.22
RBFOX1-215ENST00000553186 C17orf100A8MU93 164 aa16.44■□□□□ 0.22
RBFOX1-215ENST00000553186 VSTM5A8MXK1 200 aa16.44■□□□□ 0.22
RBFOX1-215ENST00000553186 PLAUP00749 431 aa16.44■□□□□ 0.22
RBFOX1-215ENST00000553186 BEX5Q5H9J7 111 aa16.44■□□□□ 0.22
RBFOX1-215ENST00000553186 FAHD2BQ6P2I3 314 aaPredicted RBP16.44■□□□□ 0.22
RBFOX1-215ENST00000553186 FAHD2AQ96GK7 314 aa16.44■□□□□ 0.22
RBFOX1-215ENST00000553186 RTBDNQ9BSG5 229 aaPredicted RBP16.44■□□□□ 0.22
RBFOX1-215ENST00000553186 TMPRSS13Q9BYE2 586 aa16.44■□□□□ 0.22
RBFOX1-215ENST00000553186 IFNL4K9M1U5 179 aa16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 TFF1P04155 84 aa16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 CD55P08174 381 aa16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 SCTP09683 121 aa16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 TNFSF4P23510 183 aa16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 ZBTB25P24278 435 aa16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 BAMBIQ13145 260 aa16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 SURF2Q15527 256 aaPredicted RBP16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 IGSF11Q5DX21 431 aa16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 DIRC2Q96SL1 478 aa16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 RNF115Q9Y4L5 304 aa16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 POM121CA8CG34 1229 aa16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 DEFB108AA8MXU0 73 aa16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 TRDCB7Z8K6 153 aa16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 FABP7O15540 132 aa16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 ZG16O60844 167 aa16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 RCC1P18754 421 aaPredicted RBP16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 LOXP28300 417 aaPredicted RBP16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 UBE2MP61081 183 aaKnown RBP16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 PPP1R1AQ13522 171 aa16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 HERPUD1Q15011 391 aa16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 FAM90A1Q86YD7 464 aa16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 ZCCHC24Q8N2G6 241 aaKnown RBP16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 TMEM185AQ8NFB2 350 aa16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 OR5T2Q8NGG2 359 aa16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 LILRB1Q8NHL6 650 aaPredicted RBP16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 ITLN2Q8WWU7 325 aaPredicted RBP16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 CNTNAP3BQ96NU0 1288 aa16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 CNTNAP3Q9BZ76 1288 aa16.43■□□□□ 0.22
RBFOX1-215ENST00000553186 MEIKINA0A087WXM9 373 aa16.42■□□□□ 0.22
RBFOX1-215ENST00000553186 KIR2DS1A0A191URI9 304 aa16.42■□□□□ 0.22
RBFOX1-215ENST00000553186 M0R233 179 aa16.42■□□□□ 0.22
RBFOX1-215ENST00000553186 PSG2P11465 335 aa16.42■□□□□ 0.22
RBFOX1-215ENST00000553186 PI3P19957 117 aa16.42■□□□□ 0.22
RBFOX1-215ENST00000553186 KIR2DS4P43632 304 aa16.42■□□□□ 0.22
RBFOX1-215ENST00000553186 KIR2DS1Q14954 304 aa16.42■□□□□ 0.22
RBFOX1-215ENST00000553186 ATXN7L3Q14CW9 347 aaPredicted RBP16.42■□□□□ 0.22
RBFOX1-215ENST00000553186 SPICQ8N5J4 248 aa16.42■□□□□ 0.22
RBFOX1-215ENST00000553186 CD177Q8N6Q3 437 aa16.42■□□□□ 0.22
RBFOX1-215ENST00000553186 Q8TCH9 128 aa16.42■□□□□ 0.22
RBFOX1-215ENST00000553186 ERGIC1Q969X5 290 aa16.42■□□□□ 0.22
RBFOX1-215ENST00000553186 TMEM230Q96A57 120 aa16.42■□□□□ 0.22
RBFOX1-215ENST00000553186 SCGB3A2Q96PL1 93 aa16.42■□□□□ 0.22
RBFOX1-215ENST00000553186 METRNQ9UJH8 293 aa16.42■□□□□ 0.22
RBFOX1-215ENST00000553186 ZNF222Q9UK12 451 aa16.42■□□□□ 0.22
RBFOX1-215ENST00000553186 NPTNQ9Y639 398 aa16.42■□□□□ 0.22
RBFOX1-215ENST00000553186 HLA-AP01891 365 aaKnown RBP16.41■□□□□ 0.22
RBFOX1-215ENST00000553186 APOBEC3AP31941 199 aaPredicted RBP16.41■□□□□ 0.22
RBFOX1-215ENST00000553186 FCGR2CP31995 323 aa16.41■□□□□ 0.22
RBFOX1-215ENST00000553186 NKX2-5P52952 324 aaPredicted RBP16.41■□□□□ 0.22
RBFOX1-215ENST00000553186 CCL8P80075 99 aa16.41■□□□□ 0.22
RBFOX1-215ENST00000553186 MST1LQ2TV78 715 aa16.41■□□□□ 0.22
RBFOX1-215ENST00000553186 ZFP69Q49AA0 526 aa16.41■□□□□ 0.22
RBFOX1-215ENST00000553186 ZNF808Q8N4W9 903 aaPredicted RBP16.41■□□□□ 0.22
RBFOX1-215ENST00000553186 WIPI2Q9Y4P8 454 aa16.41■□□□□ 0.22
RBFOX1-215ENST00000553186 IGKV1D-17A0A075B6S4 117 aa16.41■□□□□ 0.22
RBFOX1-215ENST00000553186 IGKV1-6A0A0C4DH72 117 aa16.41■□□□□ 0.22
RBFOX1-215ENST00000553186 H7C1Q1 480 aa16.41■□□□□ 0.22
RBFOX1-215ENST00000553186 AKR1C4P17516 323 aa16.41■□□□□ 0.22
RBFOX1-215ENST00000553186 AGAP20933 346 aa16.41■□□□□ 0.22
RBFOX1-215ENST00000553186 DHODHQ02127 395 aa16.41■□□□□ 0.22
RBFOX1-215ENST00000553186 COL10A1Q03692 680 aa16.41■□□□□ 0.22
RBFOX1-215ENST00000553186 EFNB3Q15768 340 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms