RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 VDAC1P21796 283 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 DLX6P56179 175 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 PITPNAQ00169 270 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 MS4A2Q01362 244 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 HES1Q14469 280 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 TAF13Q15543 124 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 DUSP7Q16829 419 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 CYP51A1Q16850 503 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 RFX4Q33E94 735 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 GTDC1Q4AE62 458 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 GLYATL3Q5SZD4 288 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 ERICH5Q6P6B1 374 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 CORO6Q6QEF8 472 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 SMARCD3Q6STE5 483 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 OAFQ86UD1 273 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 AQP12AQ8IXF9 295 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 Q8N1X5 172 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 SMYD1Q8NB12 490 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 NHLRC2Q8NBF2 726 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 OR2T12Q8NG77 320 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 OR51A7Q8NH64 312 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 OCC1Q8TAD7 63 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 RASSF5Q8WWW0 418 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 PYDC1Q8WXC3 89 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 LZICQ8WZA0 190 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 RPL3LQ92901 407 aaKnown RBP3.96□□□□□ -1.78
CKAP4-203ENST00000553039 DLX4Q92988 240 aaPredicted RBP3.96□□□□□ -1.78
CKAP4-203ENST00000553039 FLYWCH2Q96CP2 140 aaKnown RBP3.96□□□□□ -1.78
CKAP4-203ENST00000553039 BPIFA2Q96DR5 249 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 RRNAD1Q96FB5 475 aaKnown RBP3.96□□□□□ -1.78
CKAP4-203ENST00000553039 HARBI1Q96MB7 349 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 NSMCE2Q96MF7 247 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 ZNF714Q96N38 554 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 PRSS27Q9BQR3 290 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 PPIL3Q9H2H8 161 aaKnown RBP3.96□□□□□ -1.78
CKAP4-203ENST00000553039 TMEM133Q9H2Q1 129 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 TMEM38AQ9H6F2 299 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 MAGIXQ9H6Y5 334 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 KAT8Q9H7Z6 458 aaKnown RBP3.96□□□□□ -1.78
CKAP4-203ENST00000553039 PLEKHA1Q9HB21 404 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 S100A14Q9HCY8 104 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 TAS2R3Q9NYW6 316 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 SLC25A37Q9NYZ2 338 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 N6AMT1Q9Y5N5 214 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 WSB1Q9Y6I7 421 aa3.96□□□□□ -1.78
CKAP4-203ENST00000553039 A0A0A0MQY5 61 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 TCRBV3S1A0A5B6 114 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 DHRS12A0PJE2 317 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 C5orf52A6NGY3 159 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 NCBP2LA6PVI3 153 aaKnown RBP3.95□□□□□ -1.78
CKAP4-203ENST00000553039 ZNF850A8MQ14 1090 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 H3BNX3 289 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 H7C1C5 153 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 I3L521 148 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 K7N7A8 449 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 MPZL2O60487 215 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 OR5F1O95221 314 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 APOC1P02654 83 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 TFF1P04155 84 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 IGF1P05019 195 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 PIPP12273 146 aaPredicted RBP3.95□□□□□ -1.78
CKAP4-203ENST00000553039 FCGR1AP12314 374 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 IFI30P13284 250 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 ZNF823P16415 610 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 GPX2P18283 190 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 ATP6V1B2P21281 511 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 SLC9A3P48764 834 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 LINC00310P59036 64 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 TAS2R41P59536 307 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 ZP1P60852 638 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 LCN6P62502 163 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 HNF4GQ14541 408 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 SMIM21Q3B7S5 101 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 LINC00322Q6ZN03 302 aaPredicted RBP3.95□□□□□ -1.78
CKAP4-203ENST00000553039 GDPD3Q7L5L3 318 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 WDR86Q86TI4 376 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 MSRB3Q8IXL7 192 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 MICU2Q8IYU8 434 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 OR6V1Q8N148 313 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 C5orf56Q8N8D9 126 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 ZNF491Q8N8L2 437 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 LRRC75AQ8NAA5 344 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 OR4P4Q8NGL7 312 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 OR10A6Q8NH74 314 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 OR2AE1Q8NHA4 323 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 PFN4Q8NHR9 129 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 TRMT10AQ8TBZ6 339 aaKnown RBP3.95□□□□□ -1.78
CKAP4-203ENST00000553039 TMEM255BQ8WV15 326 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 OR5P3Q8WZ94 311 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 PAPOLGQ9BWT3 736 aaKnown RBP3.95□□□□□ -1.78
CKAP4-203ENST00000553039 SLC5A7Q9GZV3 580 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 SYT4Q9H2B2 425 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 VCXQ9H320 206 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 RETNQ9HD89 108 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 KRCC1Q9NPI7 259 aaPredicted RBP3.95□□□□□ -1.78
CKAP4-203ENST00000553039 SCRT2Q9NQ03 307 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 MRM2Q9UI43 246 aaKnown RBP3.95□□□□□ -1.78
CKAP4-203ENST00000553039 RIMS3Q9UJD0 308 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 ZNF222Q9UK12 451 aa3.95□□□□□ -1.78
CKAP4-203ENST00000553039 MRPS28Q9Y2Q9 187 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms