RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 Q6ZVH6 145 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 LRRC25Q8N386 305 aaPredicted RBP2.55□□□□□ -2
PTCH1-216ENST00000548379 C15orf56Q8N910 161 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 C8orf31Q8N9H6 132 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 KNL1Q8NG31 2342 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 OR10G4Q8NGN3 311 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 OR1J4Q8NGS1 313 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 NUBPLQ8TB37 319 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 ZNF596Q8TC21 504 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 CD200R1Q8TD46 325 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 EEF1AKMT1Q8WVE0 214 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 ATP6V1G3Q96LB4 118 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 GPR21Q99679 349 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 TEP1Q99973 2627 aaKnown RBP2.55□□□□□ -2
PTCH1-216ENST00000548379 TRPM6Q9BX84 2022 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 FBXO6Q9NRD1 293 aaPredicted RBP2.55□□□□□ -2
PTCH1-216ENST00000548379 MS4A12Q9NXJ0 267 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 NYNRINQ9P2P1 1898 aaKnown RBP2.55□□□□□ -2
PTCH1-216ENST00000548379 RAB26Q9ULW5 256 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 DOPEY2Q9Y3R5 2298 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 FBN3Q75N90 2809 aa2.55□□□□□ -2
PTCH1-216ENST00000548379 ABCA2Q9BZC7 2435 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 A0A0G2JMM0 328 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 ZNF816-ZNF321PA0A0X1KG74 233 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 A0A1W2PPB8 328 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 A0A1W2PRS3 328 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 SERPINE3A8MV23 424 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 KIR3DP1A8MWS1 328 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 F6UB75 175 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 NDUFAB1O14561 156 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 AIREO43918 545 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 CBR3O75828 277 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 RCBTB2O95199 551 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 C1QAP02745 245 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 CRHP06850 196 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 C1GALT1C1LP0DN25 315 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 MLNP12872 115 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 PRKACBP22694 351 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 GPX4P36969 197 aaPredicted RBP2.54□□□□□ -2
PTCH1-216ENST00000548379 SLC1A2P43004 574 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 CX3CR1P49238 355 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 CDK9P50750 372 aaKnown RBP2.54□□□□□ -2
PTCH1-216ENST00000548379 RAP1GDS1P52306 607 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 ACTA2P62736 377 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 ACTG2P63267 376 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 ACTC1P68032 377 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 ACTA1P68133 377 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 REEP5Q00765 189 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 ECH1Q13011 328 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 POU2AF1Q16633 256 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 CLEC12BQ2HXU8 276 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 ZNF829Q3KNS6 432 aaPredicted RBP2.54□□□□□ -2
PTCH1-216ENST00000548379 ZNF791Q3KP31 576 aaPredicted RBP2.54□□□□□ -2
PTCH1-216ENST00000548379 ANKRD22Q5VYY1 191 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 STUMQ69YW2 141 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 FAM45BPQ6NSW5 357 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 HDDC2Q7Z4H3 204 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 PCP2Q8IVA1 136 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 ENTHD1Q8IYW4 607 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 FAM58AQ8N1B3 248 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 TRIML2Q8N7C3 387 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 CNEP1R1Q8N9A8 125 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 OR10J6PQ8NGY7 276 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 OR4S2Q8NH73 311 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 FAM45AQ8TCE6 357 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 SLC7A13Q8TCU3 470 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 ZFP90Q8TF47 636 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 C1orf54Q8WWF1 131 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 MS4A6EQ96DS6 147 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 LINC00167Q96N53 147 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 RILPQ96NA2 401 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 SERPINB12Q96P63 405 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 OPALINQ96PE5 141 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 CHAC1Q9BUX1 264 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 BEX2Q9BXY8 128 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 TPK1Q9H3S4 243 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 ZNF223Q9UK11 482 aaPredicted RBP2.54□□□□□ -2
PTCH1-216ENST00000548379 FBXO5Q9UKT4 447 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 TFR2Q9UP52 801 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 PSG8Q9UQ74 426 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 SLC22A14Q9Y267 594 aa2.54□□□□□ -2
PTCH1-216ENST00000548379 CELSR2Q9HCU4 2923 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 LRBAP50851 2863 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 CSMD2Q7Z408 3487 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 MYH10P35580 1976 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 SCN8AQ9UQD0 1980 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 IGHV3-66A0A0C4DH42 116 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 SLC22A20A6NK97 555 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 HSBP1L1C9JCN9 74 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 GOLGA8MH3BSY2 632 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 UBFD1O14562 309 aaKnown RBP2.53□□□□□ -2
PTCH1-216ENST00000548379 ICOSLGO75144 302 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 ETHE1O95571 254 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 TTC4O95801 387 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 SERPINA5P05154 406 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 GNAO1P09471 354 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 ZNF250P15622 560 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 PGAM1P18669 254 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 CRYGSP22914 178 aa2.53□□□□□ -2
PTCH1-216ENST00000548379 SERPINB1P30740 379 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms