RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 EN2P19622 333 aaPredicted RBP12.26□□□□□ -0.45
SRP54-202ENST00000546080 TCN2P20062 427 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 TMEM211Q6ICI0 200 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 ASCL4Q6XD76 172 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 FOXL2NBQ6ZUU3 175 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 TMEM183AQ8IXX5 376 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 H1FOOQ8IZA3 346 aaPredicted RBP12.26□□□□□ -0.45
SRP54-202ENST00000546080 MISP3Q96FF7 219 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 LURAP1Q96LR2 239 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 CABLES2Q9BTV7 478 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 GPR87Q9BY21 358 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 FGF21Q9NSA1 209 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 CISD1Q9NZ45 108 aaKnown RBP12.26□□□□□ -0.45
SRP54-202ENST00000546080 LRFN1Q9P244 771 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 TRBV24-1A0A075B6N3 115 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 TRAV1-1A0A0B4J248 108 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 CEP290O15078 2479 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 DUX1O43812 170 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 CHST1O43916 411 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 DFFBO76075 338 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 BCL2P10415 239 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 VCANP13611 3396 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 CFHR1Q03591 330 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 HYAL1Q12794 435 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 JOSD1Q15040 202 aaPredicted RBP12.26□□□□□ -0.45
SRP54-202ENST00000546080 USF2Q15853 346 aaPredicted RBP12.26□□□□□ -0.45
SRP54-202ENST00000546080 MPV17LQ2QL34 196 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 Q6ZPA2 131 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 WDR5BQ86VZ2 330 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 THNSL2Q86YJ6 484 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 CARFQ8N187 725 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 ZNF501Q96CX3 271 aaPredicted RBP12.26□□□□□ -0.45
SRP54-202ENST00000546080 SLC7A10Q9NS82 523 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 MTCH2Q9Y6C9 303 aa12.26□□□□□ -0.45
SRP54-202ENST00000546080 MYO7BQ6PIF6 2116 aa12.25□□□□□ -0.45
SRP54-202ENST00000546080 DUXBA0A1W2PPF3 345 aa12.25□□□□□ -0.45
SRP54-202ENST00000546080 NPIPA2E9PIF3 369 aa12.25□□□□□ -0.45
SRP54-202ENST00000546080 NPIPA3F8WFD2 350 aa12.25□□□□□ -0.45
SRP54-202ENST00000546080 NRASP01111 189 aa12.25□□□□□ -0.45
SRP54-202ENST00000546080 IFNA5P01569 189 aa12.25□□□□□ -0.45
SRP54-202ENST00000546080 MDKP21741 143 aaPredicted RBP12.25□□□□□ -0.45
SRP54-202ENST00000546080 CD38P28907 300 aa12.25□□□□□ -0.45
SRP54-202ENST00000546080 SPCS3P61009 180 aa12.25□□□□□ -0.45
SRP54-202ENST00000546080 ID3Q02535 119 aa12.25□□□□□ -0.45
SRP54-202ENST00000546080 ZNF787Q6DD87 383 aa12.25□□□□□ -0.45
SRP54-202ENST00000546080 NOL4LQ96MY1 436 aaPredicted RBP12.25□□□□□ -0.45
SRP54-202ENST00000546080 ZNF385AQ96PM9 386 aaKnown RBP12.25□□□□□ -0.45
SRP54-202ENST00000546080 SIGLEC12Q96PQ1 595 aa12.25□□□□□ -0.45
SRP54-202ENST00000546080 PLSCR2Q9NRY7 297 aa12.25□□□□□ -0.45
SRP54-202ENST00000546080 KNL1Q8NG31 2342 aa12.25□□□□□ -0.45
SRP54-202ENST00000546080 CLEC18AA5D8T8 446 aa12.25□□□□□ -0.45
SRP54-202ENST00000546080 JMJD7P0C870 316 aa12.25□□□□□ -0.45
SRP54-202ENST00000546080 VDAC1P21796 283 aa12.25□□□□□ -0.45
SRP54-202ENST00000546080 FOXO1Q12778 655 aa12.25□□□□□ -0.45
SRP54-202ENST00000546080 OR8G1Q15617 311 aa12.25□□□□□ -0.45
SRP54-202ENST00000546080 NMSQ5H8A3 153 aa12.25□□□□□ -0.45
SRP54-202ENST00000546080 ZNF880Q6PDB4 577 aa12.25□□□□□ -0.45
SRP54-202ENST00000546080 CLEC18CQ8NCF0 446 aa12.25□□□□□ -0.45
SRP54-202ENST00000546080 OR10A7Q8NGE5 316 aa12.25□□□□□ -0.45
SRP54-202ENST00000546080 NAT6Q93015 286 aa12.25□□□□□ -0.45
SRP54-202ENST00000546080 ULBP2Q9BZM5 246 aa12.25□□□□□ -0.45
SRP54-202ENST00000546080 CDH20Q9HBT6 801 aa12.25□□□□□ -0.45
SRP54-202ENST00000546080 SDF2L1Q9HCN8 221 aa12.25□□□□□ -0.45
SRP54-202ENST00000546080 TP53TG5Q9Y2B4 290 aa12.25□□□□□ -0.45
SRP54-202ENST00000546080 SEC16AO15027 2179 aa12.24□□□□□ -0.45
SRP54-202ENST00000546080 IGHV3-15A0A0B4J1V0 119 aa12.24□□□□□ -0.45
SRP54-202ENST00000546080 LMO7DNF2Z398 122 aa12.24□□□□□ -0.45
SRP54-202ENST00000546080 OR7C1O76099 320 aaPredicted RBP12.24□□□□□ -0.45
SRP54-202ENST00000546080 LCATP04180 440 aa12.24□□□□□ -0.45
SRP54-202ENST00000546080 GZMBP10144 247 aa12.24□□□□□ -0.45
SRP54-202ENST00000546080 FKBP2P26885 142 aaKnown RBP12.24□□□□□ -0.45
SRP54-202ENST00000546080 RBM11P57052 281 aaKnown RBP12.24□□□□□ -0.45
SRP54-202ENST00000546080 FIP1L1Q6UN15 594 aaKnown RBP12.24□□□□□ -0.45
SRP54-202ENST00000546080 ZNF818PQ6ZRF7 136 aa12.24□□□□□ -0.45
SRP54-202ENST00000546080 C17orf78Q8N4C9 275 aa12.24□□□□□ -0.45
SRP54-202ENST00000546080 OR4X1Q8NH49 305 aa12.24□□□□□ -0.45
SRP54-202ENST00000546080 PLPPR1Q8TBJ4 325 aa12.24□□□□□ -0.45
SRP54-202ENST00000546080 RNASEH2CQ8TDP1 164 aaKnown RBP12.24□□□□□ -0.45
SRP54-202ENST00000546080 CTDSP1Q9GZU7 261 aa12.24□□□□□ -0.45
SRP54-202ENST00000546080 ZNF665Q9H7R5 613 aa12.24□□□□□ -0.45
SRP54-202ENST00000546080 IL36GQ9NZH8 169 aa12.24□□□□□ -0.45
SRP54-202ENST00000546080 MYOTQ9UBF9 498 aa12.24□□□□□ -0.45
SRP54-202ENST00000546080 FER1L5A0AVI2 2057 aa12.24□□□□□ -0.45
SRP54-202ENST00000546080 A8MWP6 167 aa12.23□□□□□ -0.45
SRP54-202ENST00000546080 CRYGSP22914 178 aa12.23□□□□□ -0.45
SRP54-202ENST00000546080 ZFP36L1Q07352 338 aaKnown RBP12.23□□□□□ -0.45
SRP54-202ENST00000546080 Q6ZS52 159 aa12.23□□□□□ -0.45
SRP54-202ENST00000546080 GAPTQ8N292 157 aa12.23□□□□□ -0.45
SRP54-202ENST00000546080 GPHA2Q96T91 129 aa12.23□□□□□ -0.45
SRP54-202ENST00000546080 RALGAPA1Q6GYQ0 2036 aa12.23□□□□□ -0.45
SRP54-202ENST00000546080 ZFAND5O76080 213 aa12.23□□□□□ -0.45
SRP54-202ENST00000546080 AMBPP02760 352 aa12.23□□□□□ -0.45
SRP54-202ENST00000546080 TK1P04183 234 aa12.23□□□□□ -0.45
SRP54-202ENST00000546080 UCP1P25874 307 aa12.23□□□□□ -0.45
SRP54-202ENST00000546080 PAX9P55771 341 aa12.23□□□□□ -0.45
SRP54-202ENST00000546080 RAB4BP61018 213 aa12.23□□□□□ -0.45
SRP54-202ENST00000546080 RAB35Q15286 201 aa12.23□□□□□ -0.45
SRP54-202ENST00000546080 LCN15Q6UWW0 184 aa12.23□□□□□ -0.45
SRP54-202ENST00000546080 MAML2Q8IZL2 1156 aaPredicted RBP12.23□□□□□ -0.45
SRP54-202ENST00000546080 OR1P1Q8NH06 330 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms