RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 MFNGO00587 321 aa9.89□□□□□ -0.83
DDB1-223ENST00000543658 ZNF737O75373 536 aa9.89□□□□□ -0.83
DDB1-223ENST00000543658 TPPPO94811 219 aa9.89□□□□□ -0.83
DDB1-223ENST00000543658 WNT2P09544 360 aa9.89□□□□□ -0.83
DDB1-223ENST00000543658 DUX4L2P0CJ85 424 aa9.89□□□□□ -0.83
DDB1-223ENST00000543658 DUX4L3P0CJ86 424 aa9.89□□□□□ -0.83
DDB1-223ENST00000543658 DUX4L4P0CJ87 422 aa9.89□□□□□ -0.83
DDB1-223ENST00000543658 DUX4L5P0CJ88 424 aa9.89□□□□□ -0.83
DDB1-223ENST00000543658 DUX4L6P0CJ89 424 aa9.89□□□□□ -0.83
DDB1-223ENST00000543658 DUX4L7P0CJ90 424 aa9.89□□□□□ -0.83
DDB1-223ENST00000543658 AMY2BP19961 511 aa9.89□□□□□ -0.83
DDB1-223ENST00000543658 PRSS3P35030 304 aa9.89□□□□□ -0.83
DDB1-223ENST00000543658 TMEM50BP56557 158 aa9.89□□□□□ -0.83
DDB1-223ENST00000543658 MRPS10P82664 201 aaKnown RBP9.89□□□□□ -0.83
DDB1-223ENST00000543658 ZNF260Q3ZCT1 412 aa9.89□□□□□ -0.83
DDB1-223ENST00000543658 PLAC9Q5JTB6 97 aa9.89□□□□□ -0.83
DDB1-223ENST00000543658 CD276Q5ZPR3 534 aa9.89□□□□□ -0.83
DDB1-223ENST00000543658 DUX4L9Q6RFH8 374 aaPredicted RBP9.89□□□□□ -0.83
DDB1-223ENST00000543658 C17orf107Q6ZR85 190 aa9.89□□□□□ -0.83
DDB1-223ENST00000543658 TRAPPC6BQ86SZ2 158 aa9.89□□□□□ -0.83
DDB1-223ENST00000543658 BIVMQ86UB2 503 aa9.89□□□□□ -0.83
DDB1-223ENST00000543658 RIMS4Q9H426 269 aaPredicted RBP9.89□□□□□ -0.83
DDB1-223ENST00000543658 C12orf4Q9NQ89 552 aa9.89□□□□□ -0.83
DDB1-223ENST00000543658 IFT46Q9NQC8 304 aa9.89□□□□□ -0.83
DDB1-223ENST00000543658 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.89□□□□□ -0.83
DDB1-223ENST00000543658 DUX4Q9UBX2 424 aa9.89□□□□□ -0.83
DDB1-223ENST00000543658 AK3Q9UIJ7 227 aa9.89□□□□□ -0.83
DDB1-223ENST00000543658 TRAPPC2LQ9UL33 140 aa9.89□□□□□ -0.83
DDB1-223ENST00000543658 PRRC2AP48634 2157 aaKnown RBP9.88□□□□□ -0.83
DDB1-223ENST00000543658 MEIKINA0A087WXM9 373 aa9.88□□□□□ -0.83
DDB1-223ENST00000543658 A0A1W2PPH5 198 aa9.88□□□□□ -0.83
DDB1-223ENST00000543658 FOXI3A8MTJ6 420 aaPredicted RBP9.88□□□□□ -0.83
DDB1-223ENST00000543658 RNF223E7ERA6 249 aa9.88□□□□□ -0.83
DDB1-223ENST00000543658 TNFRSF13BO14836 293 aaPredicted RBP9.88□□□□□ -0.83
DDB1-223ENST00000543658 FOXH1O75593 365 aa9.88□□□□□ -0.83
DDB1-223ENST00000543658 ECDO95905 644 aaPredicted RBP9.88□□□□□ -0.83
DDB1-223ENST00000543658 PTBP1P26599 531 aaKnown RBP eCLIP9.88□□□□□ -0.83
DDB1-223ENST00000543658 ERP29P30040 261 aaKnown RBP9.88□□□□□ -0.83
DDB1-223ENST00000543658 GLP1RP43220 463 aa9.88□□□□□ -0.83
DDB1-223ENST00000543658 CBX5P45973 191 aa9.88□□□□□ -0.83
DDB1-223ENST00000543658 P2RX3P56373 397 aa9.88□□□□□ -0.83
DDB1-223ENST00000543658 ZNF45Q02386 682 aa9.88□□□□□ -0.83
DDB1-223ENST00000543658 AESQ08117 197 aa9.88□□□□□ -0.83
DDB1-223ENST00000543658 PYDC2Q56P42 97 aa9.88□□□□□ -0.83
DDB1-223ENST00000543658 RNASE12Q5GAN4 147 aaKnown RBP9.88□□□□□ -0.83
DDB1-223ENST00000543658 HACD4Q5VWC8 232 aa9.88□□□□□ -0.83
DDB1-223ENST00000543658 WDR25Q64LD2 544 aaPredicted RBP9.88□□□□□ -0.83
DDB1-223ENST00000543658 SLC35E4Q6ICL7 350 aa9.88□□□□□ -0.83
DDB1-223ENST00000543658 MOB1BQ7L9L4 216 aa9.88□□□□□ -0.83
DDB1-223ENST00000543658 CCDC190Q86UF4 302 aa9.88□□□□□ -0.83
DDB1-223ENST00000543658 FAM185AQ8N0U4 392 aa9.88□□□□□ -0.83
DDB1-223ENST00000543658 PLPPR1Q8TBJ4 325 aa9.88□□□□□ -0.83
DDB1-223ENST00000543658 NUDCD2Q8WVJ2 157 aa9.88□□□□□ -0.83
DDB1-223ENST00000543658 DYRK2Q92630 601 aa9.88□□□□□ -0.83
DDB1-223ENST00000543658 REG4Q9BYZ8 158 aa9.88□□□□□ -0.83
DDB1-223ENST00000543658 WDR12Q9GZL7 423 aaKnown RBP9.88□□□□□ -0.83
DDB1-223ENST00000543658 SHARPINQ9H0F6 387 aa9.88□□□□□ -0.83
DDB1-223ENST00000543658 AUNIPQ9H7T9 357 aa9.88□□□□□ -0.83
DDB1-223ENST00000543658 RAB9BQ9NP90 201 aa9.88□□□□□ -0.83
DDB1-223ENST00000543658 KCNIP1Q9NZI2 227 aa9.88□□□□□ -0.83
DDB1-223ENST00000543658 OR6C3Q9NZP0 311 aa9.88□□□□□ -0.83
DDB1-223ENST00000543658 MGAT4AQ9UM21 535 aa9.88□□□□□ -0.83
DDB1-223ENST00000543658 UNC79Q9P2D8 2635 aa9.88□□□□□ -0.83
DDB1-223ENST00000543658 TRGV10A0A0A0MS01 117 aa9.87□□□□□ -0.83
DDB1-223ENST00000543658 TRBV23-1A0A0A0MS06 115 aa9.87□□□□□ -0.83
DDB1-223ENST00000543658 A0A0G2JMP0 313 aa9.87□□□□□ -0.83
DDB1-223ENST00000543658 A0A0X1KG70 313 aa9.87□□□□□ -0.83
DDB1-223ENST00000543658 hADV38S2A0JD32 116 aa9.87□□□□□ -0.83
DDB1-223ENST00000543658 INPP1P49441 399 aa9.87□□□□□ -0.83
DDB1-223ENST00000543658 RPL31P62899 125 aaKnown RBP9.87□□□□□ -0.83
DDB1-223ENST00000543658 LOXL1Q08397 574 aaPredicted RBP9.87□□□□□ -0.83
DDB1-223ENST00000543658 C11orf91Q3C1V1 193 aa9.87□□□□□ -0.83
DDB1-223ENST00000543658 C6orf183Q5T699 404 aa9.87□□□□□ -0.83
DDB1-223ENST00000543658 RSBN1Q5VWQ0 802 aaPredicted RBP9.87□□□□□ -0.83
DDB1-223ENST00000543658 OLFML2AQ68BL7 652 aa9.87□□□□□ -0.83
DDB1-223ENST00000543658 TRAT1Q6PIZ9 186 aa9.87□□□□□ -0.83
DDB1-223ENST00000543658 ZNF497Q6ZNH5 498 aa9.87□□□□□ -0.83
DDB1-223ENST00000543658 BTN2A1Q7KYR7 527 aa9.87□□□□□ -0.83
DDB1-223ENST00000543658 TPRX1Q8N7U7 411 aa9.87□□□□□ -0.83
DDB1-223ENST00000543658 OR4M2Q8NGB6 313 aa9.87□□□□□ -0.83
DDB1-223ENST00000543658 OR4K15Q8NH41 348 aa9.87□□□□□ -0.83
DDB1-223ENST00000543658 FCAMRQ8WWV6 532 aa9.87□□□□□ -0.83
DDB1-223ENST00000543658 TSC22D3Q99576 134 aa9.87□□□□□ -0.83
DDB1-223ENST00000543658 SCPEP1Q9HB40 452 aa9.87□□□□□ -0.83
DDB1-223ENST00000543658 KIF25Q9UIL4 384 aa9.87□□□□□ -0.83
DDB1-223ENST00000543658 POLQO75417 2590 aa9.87□□□□□ -0.83
DDB1-223ENST00000543658 NAV2Q8IVL1 2488 aa9.87□□□□□ -0.83
DDB1-223ENST00000543658 LOC105371242A0A075B767 164 aa9.86□□□□□ -0.83
DDB1-223ENST00000543658 ODAMA1E959 279 aa9.86□□□□□ -0.83
DDB1-223ENST00000543658 SULT1C2O00338 296 aa9.86□□□□□ -0.83
DDB1-223ENST00000543658 PHF1O43189 567 aaPredicted RBP9.86□□□□□ -0.83
DDB1-223ENST00000543658 ENSAO43768 121 aaKnown RBP9.86□□□□□ -0.83
DDB1-223ENST00000543658 TACC2O95359 2948 aa9.86□□□□□ -0.83
DDB1-223ENST00000543658 LPLP06858 475 aa9.86□□□□□ -0.83
DDB1-223ENST00000543658 DTYMKP23919 212 aa9.86□□□□□ -0.83
DDB1-223ENST00000543658 ETV6P41212 452 aa9.86□□□□□ -0.83
DDB1-223ENST00000543658 GLIPR1P48060 266 aa9.86□□□□□ -0.83
DDB1-223ENST00000543658 ACTBP60709 375 aa9.86□□□□□ -0.83
DDB1-223ENST00000543658 SEC61A1P61619 476 aaKnown RBP9.86□□□□□ -0.83
DDB1-223ENST00000543658 LMO4P61968 165 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms