RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 GNRHRP30968 328 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 B3GALT5-AS1P59052 145 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 POLR2GP62487 172 aaKnown RBP eCLIP11.82□□□□□ -0.52
VPS33A-208ENST00000543633 PSG4Q00888 419 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 ID3Q02535 119 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 TLE4Q04727 773 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 IL24Q13007 206 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 KHDC3LQ587J8 217 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 OR5D13Q8NGL4 314 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 NAT6Q93015 286 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 FOXB1Q99853 325 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 CRLF2Q9HC73 371 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 Q9N2K0 584 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 KIR2DS1A0A191URI9 304 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 FAM221AA4D161 298 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 HSD17B6O14756 317 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 TGOLN2O43493 480 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 DFFBO76075 338 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 NAPSAO96009 420 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 KIR2DS4P43632 304 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 CDX1P47902 265 aaPredicted RBP11.82□□□□□ -0.52
VPS33A-208ENST00000543633 MLF1P58340 268 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 OR2B8PP59922 312 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 ZNF92Q03936 586 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 KIAA0141Q14154 515 aaPredicted RBP11.82□□□□□ -0.52
VPS33A-208ENST00000543633 KIR2DS1Q14954 304 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 DAZAP2Q15038 168 aaPredicted RBP11.82□□□□□ -0.52
VPS33A-208ENST00000543633 RNPS1Q15287 305 aaKnown RBP11.82□□□□□ -0.52
VPS33A-208ENST00000543633 MPV17LQ2QL34 196 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 FAM209BQ5JX69 171 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 DNLZQ5SXM8 178 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 AKR1C8PQ5T2L2 129 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 AAED1Q7RTV5 226 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 ZNF611Q8N823 705 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 TMEM171Q8WVE6 324 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 GTF3AQ92664 365 aaKnown RBP11.82□□□□□ -0.52
VPS33A-208ENST00000543633 EXTL1Q92935 676 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 RAB39BQ96DA2 213 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 SGCZQ96LD1 299 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 RARRES2Q99969 163 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 C1QTNF5Q9BXJ0 243 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 TOLLIPQ9H0E2 274 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 DMRT1Q9Y5R6 373 aa11.82□□□□□ -0.52
VPS33A-208ENST00000543633 WDFY4Q6ZS81 3184 aa11.81□□□□□ -0.52
VPS33A-208ENST00000543633 H0Y980 276 aa11.81□□□□□ -0.52
VPS33A-208ENST00000543633 TXNL1O43396 289 aa11.81□□□□□ -0.52
VPS33A-208ENST00000543633 OR7C1O76099 320 aaPredicted RBP11.81□□□□□ -0.52
VPS33A-208ENST00000543633 ZNF205O95201 554 aa11.81□□□□□ -0.52
VPS33A-208ENST00000543633 SLC34A2O95436 690 aa11.81□□□□□ -0.52
VPS33A-208ENST00000543633 UMODP07911 640 aa11.81□□□□□ -0.52
VPS33A-208ENST00000543633 ICAM4Q14773 271 aa11.81□□□□□ -0.52
VPS33A-208ENST00000543633 AKR7LQ8NHP1 331 aa11.81□□□□□ -0.52
VPS33A-208ENST00000543633 MR1Q95460 341 aa11.81□□□□□ -0.52
VPS33A-208ENST00000543633 TVP23CQ96ET8 276 aa11.81□□□□□ -0.52
VPS33A-208ENST00000543633 SIGLEC12Q96PQ1 595 aa11.81□□□□□ -0.52
VPS33A-208ENST00000543633 ATP5SQ99766 215 aa11.81□□□□□ -0.52
VPS33A-208ENST00000543633 SLC7A10Q9NS82 523 aa11.81□□□□□ -0.52
VPS33A-208ENST00000543633 C9J4A7 227 aa11.81□□□□□ -0.52
VPS33A-208ENST00000543633 PROB1E7EW31 1015 aa11.81□□□□□ -0.52
VPS33A-208ENST00000543633 GPR37O15354 613 aa11.81□□□□□ -0.52
VPS33A-208ENST00000543633 SSSCA1O60232 199 aa11.81□□□□□ -0.52
VPS33A-208ENST00000543633 F10P00742 488 aa11.81□□□□□ -0.52
VPS33A-208ENST00000543633 B4GALT1P15291 398 aa11.81□□□□□ -0.52
VPS33A-208ENST00000543633 UBE2KP61086 200 aa11.81□□□□□ -0.52
VPS33A-208ENST00000543633 RSPO4Q2I0M5 234 aaPredicted RBP11.81□□□□□ -0.52
VPS33A-208ENST00000543633 ACSF3Q4G176 576 aaPredicted RBP11.81□□□□□ -0.52
VPS33A-208ENST00000543633 COLCA1Q6ZS62 124 aa11.81□□□□□ -0.52
VPS33A-208ENST00000543633 LINC00596Q86U02 117 aa11.81□□□□□ -0.52
VPS33A-208ENST00000543633 RPS19BP1Q86WX3 136 aaKnown RBP11.81□□□□□ -0.52
VPS33A-208ENST00000543633 IL22RA1Q8N6P7 574 aa11.81□□□□□ -0.52
VPS33A-208ENST00000543633 ZFP62Q8NB50 900 aaPredicted RBP11.81□□□□□ -0.52
VPS33A-208ENST00000543633 OR5C1Q8NGR4 320 aa11.81□□□□□ -0.52
VPS33A-208ENST00000543633 PIGCQ92535 297 aa11.81□□□□□ -0.52
VPS33A-208ENST00000543633 CPNE4Q96A23 557 aaPredicted RBP11.81□□□□□ -0.52
VPS33A-208ENST00000543633 NIPSNAP3BQ9BS92 247 aa11.81□□□□□ -0.52
VPS33A-208ENST00000543633 RIMS4Q9H426 269 aaPredicted RBP11.81□□□□□ -0.52
VPS33A-208ENST00000543633 GLRX2Q9NS18 164 aa11.81□□□□□ -0.52
VPS33A-208ENST00000543633 BDP1A6H8Y1 2624 aa11.8□□□□□ -0.52
VPS33A-208ENST00000543633 ADAM20O43506 726 aa11.8□□□□□ -0.52
VPS33A-208ENST00000543633 CELA2AP08217 269 aa11.8□□□□□ -0.52
VPS33A-208ENST00000543633 GLI4P10075 376 aa11.8□□□□□ -0.52
VPS33A-208ENST00000543633 TAGLN2P37802 199 aaKnown RBP11.8□□□□□ -0.52
VPS33A-208ENST00000543633 RPS10P46783 165 aaKnown RBP11.8□□□□□ -0.52
VPS33A-208ENST00000543633 DYNLT3P51808 116 aa11.8□□□□□ -0.52
VPS33A-208ENST00000543633 CARD18P57730 90 aa11.8□□□□□ -0.52
VPS33A-208ENST00000543633 TAS2R30P59541 319 aa11.8□□□□□ -0.52
VPS33A-208ENST00000543633 FGF12P61328 243 aa11.8□□□□□ -0.52
VPS33A-208ENST00000543633 CCL20P78556 96 aa11.8□□□□□ -0.52
VPS33A-208ENST00000543633 IGSF11Q5DX21 431 aa11.8□□□□□ -0.52
VPS33A-208ENST00000543633 GGNQ86UU5 652 aa11.8□□□□□ -0.52
VPS33A-208ENST00000543633 ZNF429Q86V71 674 aa11.8□□□□□ -0.52
VPS33A-208ENST00000543633 ZNF610Q8N9Z0 462 aa11.8□□□□□ -0.52
VPS33A-208ENST00000543633 TMEM45BQ96B21 275 aa11.8□□□□□ -0.52
VPS33A-208ENST00000543633 GPR35Q9HC97 309 aa11.8□□□□□ -0.52
VPS33A-208ENST00000543633 TINAGQ9UJW2 476 aa11.8□□□□□ -0.52
VPS33A-208ENST00000543633 MRPS18CQ9Y3D5 142 aaKnown RBP11.8□□□□□ -0.52
VPS33A-208ENST00000543633 WSB1Q9Y6I7 421 aa11.8□□□□□ -0.52
VPS33A-208ENST00000543633 ELOA3CA0A087WX78 387 aaPredicted RBP11.79□□□□□ -0.52
VPS33A-208ENST00000543633 TRBV6-6A0A0A6YYG2 114 aa11.79□□□□□ -0.52
VPS33A-208ENST00000543633 LRP5LA4QPB2 252 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms