RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 TGIF2-C20orf24A0A0A6YYL0 155 aa11.13□□□□□ -0.63
DDX11-223ENST00000542838 ZNF729A6NN14 1252 aaPredicted RBP11.13□□□□□ -0.63
DDX11-223ENST00000542838 SLC34A2O95436 690 aa11.13□□□□□ -0.63
DDX11-223ENST00000542838 NTF4P34130 210 aa11.13□□□□□ -0.63
DDX11-223ENST00000542838 RPL23AP62750 156 aaKnown RBP11.13□□□□□ -0.63
DDX11-223ENST00000542838 RAC1P63000 192 aa11.13□□□□□ -0.63
DDX11-223ENST00000542838 MRPL14Q6P1L8 145 aaKnown RBP11.13□□□□□ -0.63
DDX11-223ENST00000542838 SLC25A26Q70HW3 274 aa11.13□□□□□ -0.63
DDX11-223ENST00000542838 CMTM1Q8IZ96 169 aa11.13□□□□□ -0.63
DDX11-223ENST00000542838 GAPTQ8N292 157 aa11.13□□□□□ -0.63
DDX11-223ENST00000542838 EXTL1Q92935 676 aa11.13□□□□□ -0.63
DDX11-223ENST00000542838 NAT6Q93015 286 aa11.13□□□□□ -0.63
DDX11-223ENST00000542838 RPL36A-HNRNPH2H7BZ11 118 aa11.13□□□□□ -0.63
DDX11-223ENST00000542838 ATXN7O15265 892 aaPredicted RBP11.13□□□□□ -0.63
DDX11-223ENST00000542838 CYB5BO43169 146 aa11.13□□□□□ -0.63
DDX11-223ENST00000542838 TMEM50AO95807 157 aa11.13□□□□□ -0.63
DDX11-223ENST00000542838 LBX1P52954 281 aa11.13□□□□□ -0.63
DDX11-223ENST00000542838 ZNF154Q13106 437 aa11.13□□□□□ -0.63
DDX11-223ENST00000542838 SPNS3Q6ZMD2 512 aa11.13□□□□□ -0.63
DDX11-223ENST00000542838 ABHD14BQ96IU4 210 aa11.13□□□□□ -0.63
DDX11-223ENST00000542838 CCDC74BQ96LY2 380 aa11.13□□□□□ -0.63
DDX11-223ENST00000542838 ZNF391Q9UJN7 358 aa11.13□□□□□ -0.63
DDX11-223ENST00000542838 ZNF816-ZNF321PA0A0X1KG74 233 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 CHST1O43916 411 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 TK1P04183 234 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 TLE4Q04727 773 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 CDPF1Q6NVV7 123 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 CLDND2Q8NHS1 167 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 FGFBP3Q8TAT2 258 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 RBMXL1Q96E39 390 aaKnown RBP11.12□□□□□ -0.63
DDX11-223ENST00000542838 SIRT7Q9NRC8 400 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 PARPBPQ9NWS1 579 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 HS3ST3B1Q9Y662 390 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 HBE1P02100 147 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 SCTP09683 121 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 ID3Q02535 119 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 BAXQ07812 192 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 DAZAP2Q15038 168 aaPredicted RBP11.12□□□□□ -0.63
DDX11-223ENST00000542838 SP5Q6BEB4 398 aaPredicted RBP11.12□□□□□ -0.63
DDX11-223ENST00000542838 ZNF383Q8NA42 475 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 CPT1CQ8TCG5 803 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 SIGLEC12Q96PQ1 595 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 SF3B5Q9BWJ5 86 aaKnown RBP11.12□□□□□ -0.63
DDX11-223ENST00000542838 WNT5BQ9H1J7 359 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 TREM2Q9NZC2 230 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 CXorf65A6NEN9 183 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 HIST1H2BKO60814 126 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 HIST1H2BJP06899 126 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 HIST1H2BOP23527 126 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 HIST1H2BBP33778 126 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 GLIPR1P48060 266 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 SSR4P51571 173 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 HIST1H2BDP58876 126 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 HIST1H2BCP62807 126 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 HIST2H2BEQ16778 126 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 NMSQ5H8A3 153 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.12□□□□□ -0.63
DDX11-223ENST00000542838 AAED1Q7RTV5 226 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 OR10D4PQ8NGN7 298 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 DNASE2BQ8WZ79 361 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 HIST1H2BHQ93079 126 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 FOXB1Q99853 325 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 HIST1H2BNQ99877 126 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 HIST1H2BMQ99879 126 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 OR2H1Q9GZK4 316 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 OCIAD1Q9NX40 245 aa11.12□□□□□ -0.63
DDX11-223ENST00000542838 IGKV1D-13A0A0B4J2D9 117 aa11.11□□□□□ -0.63
DDX11-223ENST00000542838 ZNF587BE7ETH6 402 aa11.11□□□□□ -0.63
DDX11-223ENST00000542838 YKT6O15498 198 aa11.11□□□□□ -0.63
DDX11-223ENST00000542838 TRGC2P03986 189 aa11.11□□□□□ -0.63
DDX11-223ENST00000542838 IGKV1-13P0DP09 117 aa11.11□□□□□ -0.63
DDX11-223ENST00000542838 VDAC1P21796 283 aa11.11□□□□□ -0.63
DDX11-223ENST00000542838 RAC3P60763 192 aa11.11□□□□□ -0.63
DDX11-223ENST00000542838 CEACAM16Q2WEN9 425 aa11.11□□□□□ -0.63
DDX11-223ENST00000542838 KRTAP27-1Q3LI81 207 aa11.11□□□□□ -0.63
DDX11-223ENST00000542838 ZNF468Q5VIY5 522 aaPredicted RBP11.11□□□□□ -0.63
DDX11-223ENST00000542838 ATP5SQ99766 215 aa11.11□□□□□ -0.63
DDX11-223ENST00000542838 CALHM2Q9HA72 323 aa11.11□□□□□ -0.63
DDX11-223ENST00000542838 CCL28Q9NRJ3 127 aa11.11□□□□□ -0.63
DDX11-223ENST00000542838 IGHV1-45A0A0A0MS14 117 aa11.11□□□□□ -0.63
DDX11-223ENST00000542838 SLC22A20A6NK97 555 aa11.11□□□□□ -0.63
DDX11-223ENST00000542838 GJE1A6NN92 205 aa11.11□□□□□ -0.63
DDX11-223ENST00000542838 SEC14L6B5MCN3 397 aa11.11□□□□□ -0.63
DDX11-223ENST00000542838 GDF9O60383 454 aa11.11□□□□□ -0.63
DDX11-223ENST00000542838 CEACAM1P13688 526 aa11.11□□□□□ -0.63
DDX11-223ENST00000542838 RPS18P62269 152 aaKnown RBP11.11□□□□□ -0.63
DDX11-223ENST00000542838 KHDC3LQ587J8 217 aa11.11□□□□□ -0.63
DDX11-223ENST00000542838 PDZD11Q5EBL8 140 aa11.11□□□□□ -0.63
DDX11-223ENST00000542838 SLC35E3Q7Z769 313 aa11.11□□□□□ -0.63
DDX11-223ENST00000542838 PLPPR1Q8TBJ4 325 aa11.11□□□□□ -0.63
DDX11-223ENST00000542838 Q9N2K0 584 aa11.11□□□□□ -0.63
DDX11-223ENST00000542838 TCFL5Q9UL49 500 aa11.11□□□□□ -0.63
DDX11-223ENST00000542838 DUXBA0A1W2PPF3 345 aa11.1□□□□□ -0.63
DDX11-223ENST00000542838 CLEC18AA5D8T8 446 aa11.1□□□□□ -0.63
DDX11-223ENST00000542838 CBR3O75828 277 aa11.1□□□□□ -0.63
DDX11-223ENST00000542838 EDN3P14138 238 aa11.1□□□□□ -0.63
DDX11-223ENST00000542838 MMP9P14780 707 aa11.1□□□□□ -0.63
DDX11-223ENST00000542838 BCL3P20749 454 aa11.1□□□□□ -0.63
DDX11-223ENST00000542838 UCP1P25874 307 aa11.1□□□□□ -0.63
DDX11-223ENST00000542838 TAS2R30P59541 319 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms