RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 H1FXQ92522 213 aaKnown RBP19.16■□□□□ 0.66
HOMER3-205ENST00000542541 MIXL1Q9H2W2 232 aa19.16■□□□□ 0.66
HOMER3-205ENST00000542541 ETAA1Q9NY74 926 aa19.16■□□□□ 0.66
HOMER3-205ENST00000542541 PTTG2Q9NZH5 202 aa19.16■□□□□ 0.66
HOMER3-205ENST00000542541 H7C1Q1 480 aa19.15■□□□□ 0.66
HOMER3-205ENST00000542541 PHF1O43189 567 aaPredicted RBP19.15■□□□□ 0.66
HOMER3-205ENST00000542541 GSTP1P09211 210 aaKnown RBP19.15■□□□□ 0.66
HOMER3-205ENST00000542541 AESQ08117 197 aa19.15■□□□□ 0.66
HOMER3-205ENST00000542541 EDDM3AQ14507 147 aa19.15■□□□□ 0.66
HOMER3-205ENST00000542541 KRBOX4Q5JUW0 171 aa19.15■□□□□ 0.66
HOMER3-205ENST00000542541 DIRAS2Q96HU8 199 aa19.15■□□□□ 0.66
HOMER3-205ENST00000542541 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.15■□□□□ 0.66
HOMER3-205ENST00000542541 EXTL2Q9UBQ6 330 aa19.15■□□□□ 0.66
HOMER3-205ENST00000542541 LOC105371242A0A075B767 164 aa19.14■□□□□ 0.66
HOMER3-205ENST00000542541 TRBV23-1A0A0A0MS06 115 aa19.14■□□□□ 0.66
HOMER3-205ENST00000542541 B4DSR2 109 aa19.14■□□□□ 0.66
HOMER3-205ENST00000542541 FCN3O75636 299 aa19.14■□□□□ 0.66
HOMER3-205ENST00000542541 GNB3P16520 340 aa19.14■□□□□ 0.66
HOMER3-205ENST00000542541 MNDAP41218 407 aa19.14■□□□□ 0.66
HOMER3-205ENST00000542541 P2RX3P56373 397 aa19.14■□□□□ 0.66
HOMER3-205ENST00000542541 MRPS15P82914 257 aaKnown RBP19.14■□□□□ 0.66
HOMER3-205ENST00000542541 SLC35E4Q6ICL7 350 aa19.14■□□□□ 0.66
HOMER3-205ENST00000542541 BTN2A1Q7KYR7 527 aa19.14■□□□□ 0.66
HOMER3-205ENST00000542541 C1orf159Q96HA4 380 aa19.14■□□□□ 0.66
HOMER3-205ENST00000542541 RIMS4Q9H426 269 aaPredicted RBP19.14■□□□□ 0.66
HOMER3-205ENST00000542541 NCOR1P1Q9H4R4 102 aa19.14■□□□□ 0.66
HOMER3-205ENST00000542541 LPAR3Q9UBY5 353 aa19.14■□□□□ 0.66
HOMER3-205ENST00000542541 FAM157AC9JC47 383 aa19.14■□□□□ 0.65
HOMER3-205ENST00000542541 MFNGO00587 321 aa19.14■□□□□ 0.65
HOMER3-205ENST00000542541 TPPPO94811 219 aa19.14■□□□□ 0.65
HOMER3-205ENST00000542541 TNFSF8P32971 234 aa19.14■□□□□ 0.65
HOMER3-205ENST00000542541 RPL31P62899 125 aaKnown RBP19.14■□□□□ 0.65
HOMER3-205ENST00000542541 FGFRL1Q8N441 504 aa19.14■□□□□ 0.65
HOMER3-205ENST00000542541 PLPPR1Q8TBJ4 325 aa19.14■□□□□ 0.65
HOMER3-205ENST00000542541 WDFY2Q96P53 400 aa19.14■□□□□ 0.65
HOMER3-205ENST00000542541 DCTN5Q9BTE1 182 aa19.14■□□□□ 0.65
HOMER3-205ENST00000542541 ZMAT3Q9HA38 289 aaKnown RBP19.14■□□□□ 0.65
HOMER3-205ENST00000542541 KCNK7Q9Y2U2 307 aa19.14■□□□□ 0.65
HOMER3-205ENST00000542541 POLR3KQ9Y2Y1 108 aaPredicted RBP19.14■□□□□ 0.65
HOMER3-205ENST00000542541 TMEM30CPA0ZSE6 113 aa19.13■□□□□ 0.65
HOMER3-205ENST00000542541 GZMKP49863 264 aa19.13■□□□□ 0.65
HOMER3-205ENST00000542541 LCN2P80188 198 aa19.13■□□□□ 0.65
HOMER3-205ENST00000542541 MEF2CQ06413 473 aaPredicted RBP19.13■□□□□ 0.65
HOMER3-205ENST00000542541 PNLIPRP3Q17RR3 467 aa19.13■□□□□ 0.65
HOMER3-205ENST00000542541 ZNF260Q3ZCT1 412 aa19.13■□□□□ 0.65
HOMER3-205ENST00000542541 RSBN1Q5VWQ0 802 aaPredicted RBP19.13■□□□□ 0.65
HOMER3-205ENST00000542541 CNIH2Q6PI25 160 aa19.13■□□□□ 0.65
HOMER3-205ENST00000542541 BAIAP2L2Q6UXY1 529 aa19.13■□□□□ 0.65
HOMER3-205ENST00000542541 SPNS3Q6ZMD2 512 aa19.13■□□□□ 0.65
HOMER3-205ENST00000542541 ZNF497Q6ZNH5 498 aa19.13■□□□□ 0.65
HOMER3-205ENST00000542541 MAPK1IP1LQ8NDC0 245 aa19.13■□□□□ 0.65
HOMER3-205ENST00000542541 OR4M1Q8NGD0 313 aa19.13■□□□□ 0.65
HOMER3-205ENST00000542541 C15orf40Q8WUR7 153 aa19.13■□□□□ 0.65
HOMER3-205ENST00000542541 COQ2Q96H96 371 aa19.13■□□□□ 0.65
HOMER3-205ENST00000542541 ING3Q9NXR8 418 aa19.13■□□□□ 0.65
HOMER3-205ENST00000542541 RABL2AQ9UBK7 228 aaPredicted RBP19.13■□□□□ 0.65
HOMER3-205ENST00000542541 RABL2BQ9UNT1 228 aa19.13■□□□□ 0.65
HOMER3-205ENST00000542541 MEIKINA0A087WXM9 373 aa19.12■□□□□ 0.65
HOMER3-205ENST00000542541 hADV38S2A0JD32 116 aa19.12■□□□□ 0.65
HOMER3-205ENST00000542541 KIAA1324LA8MWY0 1029 aaPredicted RBP19.12■□□□□ 0.65
HOMER3-205ENST00000542541 CD3GP09693 182 aa19.12■□□□□ 0.65
HOMER3-205ENST00000542541 ZFP36P26651 326 aaKnown RBP19.12■□□□□ 0.65
HOMER3-205ENST00000542541 GLIPR1P48060 266 aa19.12■□□□□ 0.65
HOMER3-205ENST00000542541 TAS2R20P59543 309 aa19.12■□□□□ 0.65
HOMER3-205ENST00000542541 PITPNAQ00169 270 aa19.12■□□□□ 0.65
HOMER3-205ENST00000542541 ARFRP1Q13795 201 aa19.12■□□□□ 0.65
HOMER3-205ENST00000542541 TMEM249Q2WGJ8 235 aa19.12■□□□□ 0.65
HOMER3-205ENST00000542541 HACD4Q5VWC8 232 aa19.12■□□□□ 0.65
HOMER3-205ENST00000542541 LINC01356Q8N9X3 169 aa19.12■□□□□ 0.65
HOMER3-205ENST00000542541 OR6Q1Q8NGQ2 317 aa19.12■□□□□ 0.65
HOMER3-205ENST00000542541 DMRTB1Q96MA1 342 aa19.12■□□□□ 0.65
HOMER3-205ENST00000542541 CMSS1Q9BQ75 279 aaKnown RBP19.12■□□□□ 0.65
HOMER3-205ENST00000542541 AUNIPQ9H7T9 357 aa19.12■□□□□ 0.65
HOMER3-205ENST00000542541 AK3Q9UIJ7 227 aa19.12■□□□□ 0.65
HOMER3-205ENST00000542541 KIF25Q9UIL4 384 aa19.12■□□□□ 0.65
HOMER3-205ENST00000542541 RPUSD1Q9UJJ7 312 aaKnown RBP19.12■□□□□ 0.65
HOMER3-205ENST00000542541 MRPS7Q9Y2R9 242 aaKnown RBP19.12■□□□□ 0.65
HOMER3-205ENST00000542541 MALRD1Q5VYJ5 2156 aa19.12■□□□□ 0.65
HOMER3-205ENST00000542541 ODAMA1E959 279 aa19.11■□□□□ 0.65
HOMER3-205ENST00000542541 POM121CA8CG34 1229 aa19.11■□□□□ 0.65
HOMER3-205ENST00000542541 MSMBP08118 114 aa19.11■□□□□ 0.65
HOMER3-205ENST00000542541 IZUMO1Q8IYV9 350 aa19.11■□□□□ 0.65
HOMER3-205ENST00000542541 DTX3Q8N9I9 347 aa19.11■□□□□ 0.65
HOMER3-205ENST00000542541 ZNF565Q8N9K5 539 aa19.11■□□□□ 0.65
HOMER3-205ENST00000542541 OR6C3Q9NZP0 311 aa19.11■□□□□ 0.65
HOMER3-205ENST00000542541 ZNF469Q96JG9 3925 aaPredicted RBP19.11■□□□□ 0.65
HOMER3-205ENST00000542541 CELSR1Q9NYQ6 3014 aa19.11■□□□□ 0.65
HOMER3-205ENST00000542541 A0A1W2PPH5 198 aa19.11■□□□□ 0.65
HOMER3-205ENST00000542541 MT-ND4P03905 459 aa19.11■□□□□ 0.65
HOMER3-205ENST00000542541 LIPFP07098 398 aa19.11■□□□□ 0.65
HOMER3-205ENST00000542541 MELTFP08582 738 aa19.11■□□□□ 0.65
HOMER3-205ENST00000542541 LINC00299Q6ZSB3 139 aa19.11■□□□□ 0.65
HOMER3-205ENST00000542541 GAPTQ8N292 157 aa19.11■□□□□ 0.65
HOMER3-205ENST00000542541 CIARTQ8N365 385 aaPredicted RBP19.11■□□□□ 0.65
HOMER3-205ENST00000542541 TPRX1Q8N7U7 411 aa19.11■□□□□ 0.65
HOMER3-205ENST00000542541 C8orf46Q8TAG6 207 aa19.11■□□□□ 0.65
HOMER3-205ENST00000542541 CHMP1AQ9HD42 196 aaPredicted RBP19.11■□□□□ 0.65
HOMER3-205ENST00000542541 C12orf4Q9NQ89 552 aa19.11■□□□□ 0.65
HOMER3-205ENST00000542541 ITPR3Q14573 2671 aa19.1■□□□□ 0.65
HOMER3-205ENST00000542541 TRGV10A0A0A0MS01 117 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms