RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 RBM39Q14498 530 aaKnown RBP9.29□□□□□ -0.92
SCG3-202ENST00000542355 SPIN3Q5JUX0 258 aa9.29□□□□□ -0.92
SCG3-202ENST00000542355 CD276Q5ZPR3 534 aa9.29□□□□□ -0.92
SCG3-202ENST00000542355 FIP1L1Q6UN15 594 aaKnown RBP9.29□□□□□ -0.92
SCG3-202ENST00000542355 MOGAT3Q86VF5 341 aa9.29□□□□□ -0.92
SCG3-202ENST00000542355 OR11H7Q8NGC8 314 aa9.29□□□□□ -0.92
SCG3-202ENST00000542355 ITLN1Q8WWA0 313 aa9.29□□□□□ -0.92
SCG3-202ENST00000542355 NEUROG1Q92886 237 aa9.29□□□□□ -0.92
SCG3-202ENST00000542355 FN3KRPQ9HA64 309 aa9.29□□□□□ -0.92
SCG3-202ENST00000542355 SHISA9B4DS77 424 aa9.29□□□□□ -0.92
SCG3-202ENST00000542355 SLC33A1O00400 549 aaPredicted RBP9.29□□□□□ -0.92
SCG3-202ENST00000542355 ZNF205O95201 554 aa9.29□□□□□ -0.92
SCG3-202ENST00000542355 PTBP3O95758 552 aaKnown RBP9.29□□□□□ -0.92
SCG3-202ENST00000542355 HAND1O96004 215 aa9.29□□□□□ -0.92
SCG3-202ENST00000542355 NAPSAO96009 420 aa9.29□□□□□ -0.92
SCG3-202ENST00000542355 OR4E1P0C645 316 aa9.29□□□□□ -0.92
SCG3-202ENST00000542355 OR5H8P0DN80 308 aa9.29□□□□□ -0.92
SCG3-202ENST00000542355 CXCL3P19876 107 aa9.29□□□□□ -0.92
SCG3-202ENST00000542355 GRK1Q15835 563 aa9.29□□□□□ -0.92
SCG3-202ENST00000542355 PAN3Q58A45 887 aaKnown RBP9.29□□□□□ -0.92
SCG3-202ENST00000542355 ZNF626Q68DY1 528 aa9.29□□□□□ -0.92
SCG3-202ENST00000542355 ACP7Q6ZNF0 438 aa9.29□□□□□ -0.92
SCG3-202ENST00000542355 C5orf24Q7Z6I8 188 aa9.29□□□□□ -0.92
SCG3-202ENST00000542355 DMRTC2Q8IXT2 367 aaPredicted RBP9.29□□□□□ -0.92
SCG3-202ENST00000542355 ZDHHC22Q8N966 263 aa9.29□□□□□ -0.92
SCG3-202ENST00000542355 BOLLQ8N9W6 283 aaKnown RBP9.29□□□□□ -0.92
SCG3-202ENST00000542355 CCDC107Q8WV48 283 aa9.29□□□□□ -0.92
SCG3-202ENST00000542355 ZNF2Q9BSG1 426 aaPredicted RBP9.29□□□□□ -0.92
SCG3-202ENST00000542355 TMPRSS13Q9BYE2 586 aa9.29□□□□□ -0.92
SCG3-202ENST00000542355 ALX4Q9H161 411 aaPredicted RBP9.29□□□□□ -0.92
SCG3-202ENST00000542355 NECAP2Q9NVZ3 263 aa9.29□□□□□ -0.92
SCG3-202ENST00000542355 GLS2Q9UI32 602 aa9.29□□□□□ -0.92
SCG3-202ENST00000542355 ZNF222Q9UK12 451 aa9.29□□□□□ -0.92
SCG3-202ENST00000542355 PKD1L2Q7Z442 2459 aa9.28□□□□□ -0.92
SCG3-202ENST00000542355 COL6A6A6NMZ7 2263 aa9.28□□□□□ -0.92
SCG3-202ENST00000542355 RFPL4AA6NLU0 287 aa9.28□□□□□ -0.92
SCG3-202ENST00000542355 SNRPGP15A8MWD9 76 aa9.28□□□□□ -0.92
SCG3-202ENST00000542355 E7EQL1 145 aa9.28□□□□□ -0.92
SCG3-202ENST00000542355 RFPL4AL1F8VTS6 287 aa9.28□□□□□ -0.92
SCG3-202ENST00000542355 TFF1P04155 84 aa9.28□□□□□ -0.92
SCG3-202ENST00000542355 GLAP06280 429 aa9.28□□□□□ -0.92
SCG3-202ENST00000542355 CD3EP07766 207 aa9.28□□□□□ -0.92
SCG3-202ENST00000542355 SERPINF1P36955 418 aa9.28□□□□□ -0.92
SCG3-202ENST00000542355 TNFAIP6P98066 277 aaPredicted RBP9.28□□□□□ -0.92
SCG3-202ENST00000542355 AADACL3Q5VUY0 350 aa9.28□□□□□ -0.92
SCG3-202ENST00000542355 C20orf204Q6ZNR8 217 aa9.28□□□□□ -0.92
SCG3-202ENST00000542355 LHFPL1Q86WI0 220 aa9.28□□□□□ -0.92
SCG3-202ENST00000542355 ZCCHC24Q8N2G6 241 aaKnown RBP9.28□□□□□ -0.92
SCG3-202ENST00000542355 MUC20Q8N307 709 aaPredicted RBP9.28□□□□□ -0.92
SCG3-202ENST00000542355 PRR18Q8N4B5 295 aa9.28□□□□□ -0.92
SCG3-202ENST00000542355 UXS1Q8NBZ7 420 aa9.28□□□□□ -0.92
SCG3-202ENST00000542355 OR5T2Q8NGG2 359 aa9.28□□□□□ -0.92
SCG3-202ENST00000542355 C1orf159Q96HA4 380 aa9.28□□□□□ -0.92
SCG3-202ENST00000542355 TMEM165Q9HC07 324 aa9.28□□□□□ -0.92
SCG3-202ENST00000542355 Q9N2K0 584 aa9.28□□□□□ -0.92
SCG3-202ENST00000542355 TREM2Q9NZC2 230 aa9.28□□□□□ -0.92
SCG3-202ENST00000542355 IL19Q9UHD0 177 aa9.28□□□□□ -0.92
SCG3-202ENST00000542355 ZDHHC8Q9ULC8 765 aa9.28□□□□□ -0.92
SCG3-202ENST00000542355 OR5H14A6NHG9 310 aa9.27□□□□□ -0.92
SCG3-202ENST00000542355 AKR1C4P17516 323 aa9.27□□□□□ -0.92
SCG3-202ENST00000542355 EGR1P18146 543 aa9.27□□□□□ -0.92
SCG3-202ENST00000542355 NKX2-5P52952 324 aaPredicted RBP9.27□□□□□ -0.92
SCG3-202ENST00000542355 UBE2MP61081 183 aaKnown RBP9.27□□□□□ -0.92
SCG3-202ENST00000542355 SORDQ00796 357 aa9.27□□□□□ -0.92
SCG3-202ENST00000542355 TLE1Q04724 770 aa9.27□□□□□ -0.92
SCG3-202ENST00000542355 BAMBIQ13145 260 aa9.27□□□□□ -0.92
SCG3-202ENST00000542355 ADAD2Q8NCV1 583 aaKnown RBP9.27□□□□□ -0.92
SCG3-202ENST00000542355 MRPL30Q8TCC3 161 aaKnown RBP9.27□□□□□ -0.92
SCG3-202ENST00000542355 RIMS4Q9H426 269 aaPredicted RBP9.27□□□□□ -0.92
SCG3-202ENST00000542355 GPR132Q9UNW8 380 aa9.27□□□□□ -0.92
SCG3-202ENST00000542355 ESPL1Q14674 2120 aa9.27□□□□□ -0.93
SCG3-202ENST00000542355 PSPNO60542 156 aa9.27□□□□□ -0.93
SCG3-202ENST00000542355 ZG16O60844 167 aa9.27□□□□□ -0.93
SCG3-202ENST00000542355 PLAUP00749 431 aa9.27□□□□□ -0.93
SCG3-202ENST00000542355 SCTP09683 121 aa9.27□□□□□ -0.93
SCG3-202ENST00000542355 SULT1A3P0DMM9 295 aa9.27□□□□□ -0.93
SCG3-202ENST00000542355 SULT1A4P0DMN0 295 aa9.27□□□□□ -0.93
SCG3-202ENST00000542355 PI3P19957 117 aa9.27□□□□□ -0.93
SCG3-202ENST00000542355 CCL8P80075 99 aa9.27□□□□□ -0.93
SCG3-202ENST00000542355 TFF3Q07654 80 aa9.27□□□□□ -0.93
SCG3-202ENST00000542355 ATXN7L3Q14CW9 347 aaPredicted RBP9.27□□□□□ -0.93
SCG3-202ENST00000542355 SMIM21Q3B7S5 101 aa9.27□□□□□ -0.93
SCG3-202ENST00000542355 IGSF11Q5DX21 431 aa9.27□□□□□ -0.93
SCG3-202ENST00000542355 DHRS11Q6UWP2 260 aa9.27□□□□□ -0.93
SCG3-202ENST00000542355 SLC25A42Q86VD7 318 aa9.27□□□□□ -0.93
SCG3-202ENST00000542355 GCSAMQ8N6F7 178 aa9.27□□□□□ -0.93
SCG3-202ENST00000542355 GALNT11Q8NCW6 608 aa9.27□□□□□ -0.93
SCG3-202ENST00000542355 ZNF431Q8TF32 576 aaPredicted RBP9.27□□□□□ -0.93
SCG3-202ENST00000542355 LIME1Q9H400 295 aa9.27□□□□□ -0.93
SCG3-202ENST00000542355 C5orf66Q9H5L9 145 aa9.27□□□□□ -0.93
SCG3-202ENST00000542355 C17orf100A8MU93 164 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 SRRM5B3KS81 715 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 KNG1P01042 644 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 RCC1P18754 421 aaPredicted RBP9.26□□□□□ -0.93
SCG3-202ENST00000542355 LMO1P25800 156 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 CFHR2P36980 270 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 GATA4P43694 442 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 SEC61A1P61619 476 aaKnown RBP9.26□□□□□ -0.93
SCG3-202ENST00000542355 DHRS2Q13268 280 aa9.26□□□□□ -0.93
SCG3-202ENST00000542355 SRSF7Q16629 238 aaKnown RBP eCLIP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms