RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 SRSF7Q16629 238 aaKnown RBP eCLIP18.97■□□□□ 0.63
HOMER3-204ENST00000539827 LGALSLQ3ZCW2 172 aaPredicted RBP18.97■□□□□ 0.63
HOMER3-204ENST00000539827 PLPPR1Q8TBJ4 325 aa18.97■□□□□ 0.63
HOMER3-204ENST00000539827 MRPL37Q9BZE1 423 aaKnown RBP18.97■□□□□ 0.63
HOMER3-204ENST00000539827 TAAR3PQ9P1P4 343 aa18.97■□□□□ 0.63
HOMER3-204ENST00000539827 DPRXA6NFQ7 191 aa18.96■□□□□ 0.63
HOMER3-204ENST00000539827 TRDCB7Z8K6 153 aa18.96■□□□□ 0.63
HOMER3-204ENST00000539827 ATXN7O15265 892 aaPredicted RBP18.96■□□□□ 0.63
HOMER3-204ENST00000539827 HAND1O96004 215 aa18.96■□□□□ 0.63
HOMER3-204ENST00000539827 AADACP22760 399 aa18.96■□□□□ 0.63
HOMER3-204ENST00000539827 SEC61A1P61619 476 aaKnown RBP18.96■□□□□ 0.63
HOMER3-204ENST00000539827 RPS23P62266 143 aaKnown RBP18.96■□□□□ 0.63
HOMER3-204ENST00000539827 TMEM108Q6UXF1 575 aa18.96■□□□□ 0.63
HOMER3-204ENST00000539827 ZNF767PQ75MW2 155 aa18.96■□□□□ 0.63
HOMER3-204ENST00000539827 CLEC4MQ9H2X3 399 aaPredicted RBP18.96■□□□□ 0.63
HOMER3-204ENST00000539827 RIMS4Q9H426 269 aaPredicted RBP18.96■□□□□ 0.63
HOMER3-204ENST00000539827 DECR2Q9NUI1 292 aa18.96■□□□□ 0.63
HOMER3-204ENST00000539827 FAM25EA8MYX2 175 aa18.95■□□□□ 0.62
HOMER3-204ENST00000539827 BET1O15155 118 aa18.95■□□□□ 0.62
HOMER3-204ENST00000539827 SPRY3O43610 288 aa18.95■□□□□ 0.62
HOMER3-204ENST00000539827 TSC22D2O75157 780 aa18.95■□□□□ 0.62
HOMER3-204ENST00000539827 TFF1P04155 84 aa18.95■□□□□ 0.62
HOMER3-204ENST00000539827 CA7P43166 264 aa18.95■□□□□ 0.62
HOMER3-204ENST00000539827 MZT1Q08AG7 82 aa18.95■□□□□ 0.62
HOMER3-204ENST00000539827 SPRNQ5BIV9 151 aa18.95■□□□□ 0.62
HOMER3-204ENST00000539827 FIP1L1Q6UN15 594 aaKnown RBP18.95■□□□□ 0.62
HOMER3-204ENST00000539827 ACP7Q6ZNF0 438 aa18.95■□□□□ 0.62
HOMER3-204ENST00000539827 ST6GALNAC3Q8NDV1 305 aa18.95■□□□□ 0.62
HOMER3-204ENST00000539827 ELMOD3Q96FG2 381 aa18.95■□□□□ 0.62
HOMER3-204ENST00000539827 SEC22AQ96IW7 307 aa18.95■□□□□ 0.62
HOMER3-204ENST00000539827 PRORYQ9H606 182 aa18.95■□□□□ 0.62
HOMER3-204ENST00000539827 IGLV3-9A0A075B6K5 115 aa18.95■□□□□ 0.62
HOMER3-204ENST00000539827 TRAV39A0A0B4J263 110 aa18.95■□□□□ 0.62
HOMER3-204ENST00000539827 RPS2P15880 293 aaKnown RBP18.95■□□□□ 0.62
HOMER3-204ENST00000539827 CD200P41217 278 aa18.95■□□□□ 0.62
HOMER3-204ENST00000539827 ANKRD55Q3KP44 614 aa18.95■□□□□ 0.62
HOMER3-204ENST00000539827 SPIN3Q5JUX0 258 aa18.95■□□□□ 0.62
HOMER3-204ENST00000539827 OR5T2Q8NGG2 359 aa18.95■□□□□ 0.62
HOMER3-204ENST00000539827 LRRC29Q8WV35 223 aa18.95■□□□□ 0.62
HOMER3-204ENST00000539827 PDCD10Q9BUL8 212 aa18.95■□□□□ 0.62
HOMER3-204ENST00000539827 TRBV6-6A0A0A6YYG2 114 aa18.94■□□□□ 0.62
HOMER3-204ENST00000539827 PLSCR5A0PG75 271 aa18.94■□□□□ 0.62
HOMER3-204ENST00000539827 RCC1P18754 421 aaPredicted RBP18.94■□□□□ 0.62
HOMER3-204ENST00000539827 LY6DQ14210 128 aa18.94■□□□□ 0.62
HOMER3-204ENST00000539827 MOB3AQ96BX8 217 aa18.94■□□□□ 0.62
HOMER3-204ENST00000539827 ATP23Q9Y6H3 246 aa18.94■□□□□ 0.62
HOMER3-204ENST00000539827 PCNX1Q96RV3 2341 aa18.94■□□□□ 0.62
HOMER3-204ENST00000539827 KIR2DS1A0A191URI9 304 aa18.93■□□□□ 0.62
HOMER3-204ENST00000539827 ABCD4O14678 606 aa18.93■□□□□ 0.62
HOMER3-204ENST00000539827 PTAFRP25105 342 aa18.93■□□□□ 0.62
HOMER3-204ENST00000539827 SSTR2P30874 369 aa18.93■□□□□ 0.62
HOMER3-204ENST00000539827 KIR2DS4P43632 304 aa18.93■□□□□ 0.62
HOMER3-204ENST00000539827 HERV-K104P61576 105 aa18.93■□□□□ 0.62
HOMER3-204ENST00000539827 SORDQ00796 357 aa18.93■□□□□ 0.62
HOMER3-204ENST00000539827 KIR2DS1Q14954 304 aa18.93■□□□□ 0.62
HOMER3-204ENST00000539827 ATXN7L3Q14CW9 347 aaPredicted RBP18.93■□□□□ 0.62
HOMER3-204ENST00000539827 HERPUD1Q15011 391 aa18.93■□□□□ 0.62
HOMER3-204ENST00000539827 ZNF880Q6PDB4 577 aa18.93■□□□□ 0.62
HOMER3-204ENST00000539827 WFIKKN1Q96NZ8 548 aa18.93■□□□□ 0.62
HOMER3-204ENST00000539827 DHRS9Q9BPW9 319 aa18.93■□□□□ 0.62
HOMER3-204ENST00000539827 CHD3Q12873 2000 aaKnown RBP18.93■□□□□ 0.62
HOMER3-204ENST00000539827 IGKV1-6A0A0C4DH72 117 aa18.93■□□□□ 0.62
HOMER3-204ENST00000539827 DBX1A6NMT0 343 aa18.93■□□□□ 0.62
HOMER3-204ENST00000539827 HLA-GP17693 338 aa18.93■□□□□ 0.62
HOMER3-204ENST00000539827 MDH2P40926 338 aaKnown RBP18.93■□□□□ 0.62
HOMER3-204ENST00000539827 LPCAT3Q6P1A2 487 aa18.93■□□□□ 0.62
HOMER3-204ENST00000539827 OR2V2Q96R30 315 aa18.93■□□□□ 0.62
HOMER3-204ENST00000539827 MED19A0JLT2 244 aaPredicted RBP18.92■□□□□ 0.62
HOMER3-204ENST00000539827 CCL21O00585 134 aa18.92■□□□□ 0.62
HOMER3-204ENST00000539827 PPYP01298 95 aa18.92■□□□□ 0.62
HOMER3-204ENST00000539827 BSPH1Q075Z2 132 aa18.92■□□□□ 0.62
HOMER3-204ENST00000539827 NUP37Q8NFH4 326 aa18.92■□□□□ 0.62
HOMER3-204ENST00000539827 COQ8AQ8NI60 647 aa18.92■□□□□ 0.62
HOMER3-204ENST00000539827 MEGF10Q96KG7 1140 aa18.92■□□□□ 0.62
HOMER3-204ENST00000539827 GLS2Q9UI32 602 aa18.92■□□□□ 0.62
HOMER3-204ENST00000539827 SHANK1Q9Y566 2161 aa18.92■□□□□ 0.62
HOMER3-204ENST00000539827 TEX13DA0A0J9YY54 714 aaPredicted RBP18.92■□□□□ 0.62
HOMER3-204ENST00000539827 C13orf42A0A1B0GVH6 325 aa18.92■□□□□ 0.62
HOMER3-204ENST00000539827 RGS11O94810 467 aa18.92■□□□□ 0.62
HOMER3-204ENST00000539827 PTBP3O95758 552 aaKnown RBP18.92■□□□□ 0.62
HOMER3-204ENST00000539827 EGR1P18146 543 aa18.92■□□□□ 0.62
HOMER3-204ENST00000539827 SERPINF1P36955 418 aa18.92■□□□□ 0.62
HOMER3-204ENST00000539827 ZNF81P51508 661 aa18.92■□□□□ 0.62
HOMER3-204ENST00000539827 PIGPP57054 158 aa18.92■□□□□ 0.62
HOMER3-204ENST00000539827 SELENOVP59797 346 aa18.92■□□□□ 0.62
HOMER3-204ENST00000539827 HLA-DRB3P79483 266 aa18.92■□□□□ 0.62
HOMER3-204ENST00000539827 ABCA11PQ4W5N1 156 aa18.92■□□□□ 0.62
HOMER3-204ENST00000539827 PHLDA2Q53GA4 152 aa18.92■□□□□ 0.62
HOMER3-204ENST00000539827 ZNF497Q6ZNH5 498 aa18.92■□□□□ 0.62
HOMER3-204ENST00000539827 BOLLQ8N9W6 283 aaKnown RBP18.92■□□□□ 0.62
HOMER3-204ENST00000539827 ITLN1Q8WWA0 313 aa18.92■□□□□ 0.62
HOMER3-204ENST00000539827 ASB13Q8WXK3 278 aa18.92■□□□□ 0.62
HOMER3-204ENST00000539827 MRPL24Q96A35 216 aaKnown RBP18.92■□□□□ 0.62
HOMER3-204ENST00000539827 FXYD6-FXYD2A0A087WZ82 144 aa18.91■□□□□ 0.62
HOMER3-204ENST00000539827 TRAV14DV4A0A0A6YYC5 116 aa18.91■□□□□ 0.62
HOMER3-204ENST00000539827 A0A0B4J2A0 478 aa18.91■□□□□ 0.62
HOMER3-204ENST00000539827 C5orf51A6NDU8 294 aa18.91■□□□□ 0.62
HOMER3-204ENST00000539827 CRYM-AS1A6NIL9 109 aa18.91■□□□□ 0.62
HOMER3-204ENST00000539827 PSPNO60542 156 aa18.91■□□□□ 0.62
HOMER3-204ENST00000539827 ADAP1O75689 374 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms