RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 DOCK11Q5JSL3 2073 aa5.81□□□□□ -1.48
USP28-207ENST00000538475 TRBV11-1A0A0K0K1C0 115 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 MANSC4A6NHS7 340 aaPredicted RBP5.8□□□□□ -1.48
USP28-207ENST00000538475 FAM166BA8MTA8 275 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 HSBP1L1C9JCN9 74 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 ZNF878C9JN71 531 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 F6UZH7 168 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 CIDEAO60543 219 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 C1QL1O75973 258 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 SCGB1D2O95969 90 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 HLA-HP01893 362 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 HPNP05981 417 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 THEGLP0DJG4 465 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 GP1BBP13224 206 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 CTLA4P16410 223 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 KLK2P20151 261 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 BLVRBP30043 206 aaPredicted RBP5.8□□□□□ -1.48
USP28-207ENST00000538475 GPR3P46089 330 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 GALR1P47211 349 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 PIGPP57054 158 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 TPPP2P59282 170 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 RAB11AP62491 216 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 ZNF92Q03936 586 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 FOXL1Q12952 345 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 ENDOGQ14249 297 aaKnown RBP5.8□□□□□ -1.48
USP28-207ENST00000538475 HYAL4Q2M3T9 481 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 COX19Q49B96 90 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 MORN2Q502X0 79 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 LCN10Q6JVE6 187 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 ARMC6Q6NXE6 501 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 ZNF705AQ6ZN79 300 aaPredicted RBP5.8□□□□□ -1.48
USP28-207ENST00000538475 Q6ZS49 121 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 C20orf196Q8IYI0 205 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 GCNT2Q8N0V5 402 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 TMEM252Q8N6L7 170 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 OR51T1Q8NGJ9 327 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 FLVCR1-AS1Q8TAF5 88 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 PP6455Q8WZ26 134 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 DAZLQ92904 295 aaKnown RBP5.8□□□□□ -1.48
USP28-207ENST00000538475 ADAT3Q96EY9 351 aaPredicted RBP5.8□□□□□ -1.48
USP28-207ENST00000538475 SLC35E1Q96K37 410 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 MS4A10Q96PG2 267 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 RAB40CQ96S21 281 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 MACROD1Q9BQ69 325 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 TXNDC17Q9BRA2 123 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 ZPBPQ9BS86 351 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 ST6GALNAC5Q9BVH7 336 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 MAGT1Q9H0U3 335 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 OR51I2Q9H344 312 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 MANBALQ9NQG1 85 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 CBLN4Q9NTU7 201 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 TMEM106BQ9NUM4 274 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 KLHL13Q9P2N7 655 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 HSPB7Q9UBY9 170 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 LAMP3Q9UQV4 416 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 CLDN16Q9Y5I7 305 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 PRRC2BQ5JSZ5 2229 aaKnown RBP5.8□□□□□ -1.48
USP28-207ENST00000538475 RP1P56715 2156 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 SHANK1Q9Y566 2161 aa5.8□□□□□ -1.48
USP28-207ENST00000538475 LINC01553A4QN01 128 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 LRP5LA4QPB2 252 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 C22orf46C9J442 243 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 H7C1C5 153 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 K7EQS6 105 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 PLPP3O14495 311 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 YPEL1O60688 119 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 RAD51DO75771 328 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 AHSA1O95433 338 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 LCATP04180 440 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 OR4A8P0C604 315 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 TDGF1P13385 188 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 IRF2P14316 349 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 BMP5P22003 454 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 MPLP40238 635 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 MDH2P40926 338 aaKnown RBP5.79□□□□□ -1.48
USP28-207ENST00000538475 RPL29P47914 159 aaKnown RBP5.79□□□□□ -1.48
USP28-207ENST00000538475 UBE2G2P60604 165 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 ARF6P62330 175 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 LCN6P62502 163 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 RPL11P62913 178 aaKnown RBP5.79□□□□□ -1.48
USP28-207ENST00000538475 GRB2P62993 217 aaKnown RBP5.79□□□□□ -1.48
USP28-207ENST00000538475 FAM53BQ14153 422 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 RNPS1Q15287 305 aaKnown RBP5.79□□□□□ -1.48
USP28-207ENST00000538475 EXT1Q16394 746 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 ATP6V1FQ16864 119 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 C21orf62-AS1Q17RA5 79 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 TMEM249Q2WGJ8 235 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 TCEAL5Q5H9L2 206 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 LILRA6Q6PI73 481 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 WDR5BQ86VZ2 330 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 PNKDQ8N490 385 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 KLHDC1Q8N7A1 406 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 ZFP62Q8NB50 900 aaPredicted RBP5.79□□□□□ -1.48
USP28-207ENST00000538475 OR5L1Q8NGL2 311 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 OR4C3Q8NH37 302 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 OR5B3Q8NH48 314 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 SCGB1C1Q8TD33 95 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 ASB10Q8WXI3 467 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 SLAMF6Q96DU3 332 aa5.79□□□□□ -1.48
USP28-207ENST00000538475 JSRP1Q96MG2 331 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms