RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 VAMP2P63027 116 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 GNMTQ14749 295 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 ZNF826PQ6ZT77 177 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 HSD17B13Q7Z5P4 300 aaPredicted RBP7.47□□□□□ -1.21
UBE3B-208ENST00000538070 DPPA2Q7Z7J5 298 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 TBC1D26Q86UD7 250 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 KIRREL1Q96J84 757 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 FGF23Q9GZV9 251 aaPredicted RBP7.47□□□□□ -1.21
UBE3B-208ENST00000538070 ERRFI1Q9UJM3 462 aaPredicted RBP7.47□□□□□ -1.21
UBE3B-208ENST00000538070 IGKV1D-13A0A0B4J2D9 117 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 TUBAL3A6NHL2 446 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 CRYM-AS1A6NIL9 109 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 WDR1O75083 606 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 SNAPC5O75971 98 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 IGKV1-13P0DP09 117 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 LPAR6P43657 344 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 CAMLGP49069 296 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 TLE1Q04724 770 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 FAM76BQ5HYJ3 339 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 TPRX1Q8N7U7 411 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 LHFPL5Q8TAF8 219 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 NKX6-2Q9C056 277 aaPredicted RBP7.47□□□□□ -1.21
UBE3B-208ENST00000538070 SHARPINQ9H0F6 387 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 SAV1Q9H4B6 383 aaPredicted RBP7.47□□□□□ -1.21
UBE3B-208ENST00000538070 CYTL1Q9NRR1 136 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 SPRR3Q9UBC9 169 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 TINAGQ9UJW2 476 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 TRAPPC2LQ9UL33 140 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 DEGS1O15121 323 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 ADAM20O43506 726 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 NXPH2O95156 264 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 NFYBP25208 207 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 RTL6Q6ICC9 239 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 TMEM182Q6ZP80 229 aaPredicted RBP7.47□□□□□ -1.21
UBE3B-208ENST00000538070 LGI3Q8N145 548 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 FDCSPQ8NFU4 85 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 GLYATL2Q8WU03 294 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 C1QTNF5Q9BXJ0 243 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 TLNRD1Q9H1K6 362 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 SH3BGRL3Q9H299 93 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 RGCCQ9H4X1 137 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 SH3BGRL2Q9UJC5 107 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 EDARQ9UNE0 448 aa7.47□□□□□ -1.21
UBE3B-208ENST00000538070 C3orf85A0A1B0GTC6 90 aa7.46□□□□□ -1.21
UBE3B-208ENST00000538070 FOXI3A8MTJ6 420 aaPredicted RBP7.46□□□□□ -1.21
UBE3B-208ENST00000538070 C21orf140B9A014 251 aa7.46□□□□□ -1.21
UBE3B-208ENST00000538070 RBMXL2O75526 392 aaKnown RBP7.46□□□□□ -1.21
UBE3B-208ENST00000538070 TSPAN9O75954 239 aa7.46□□□□□ -1.21
UBE3B-208ENST00000538070 TSPAN15O95858 294 aa7.46□□□□□ -1.21
UBE3B-208ENST00000538070 OR8U9P0C7N5 309 aa7.46□□□□□ -1.21
UBE3B-208ENST00000538070 HOXC12P31275 282 aa7.46□□□□□ -1.21
UBE3B-208ENST00000538070 WNT5AP41221 380 aa7.46□□□□□ -1.21
UBE3B-208ENST00000538070 CXorf66Q5JRM2 361 aaPredicted RBP7.46□□□□□ -1.21
UBE3B-208ENST00000538070 Q6ZPA2 131 aa7.46□□□□□ -1.21
UBE3B-208ENST00000538070 ZFP82Q8N141 532 aa7.46□□□□□ -1.21
UBE3B-208ENST00000538070 ZFP62Q8NB50 900 aaPredicted RBP7.46□□□□□ -1.21
UBE3B-208ENST00000538070 SUMF2Q8NBJ7 301 aa7.46□□□□□ -1.21
UBE3B-208ENST00000538070 OR1J1Q8NGS3 322 aa7.46□□□□□ -1.21
UBE3B-208ENST00000538070 FAM213BQ8TBF2 198 aa7.46□□□□□ -1.21
UBE3B-208ENST00000538070 C10orf35Q96D05 121 aa7.46□□□□□ -1.21
UBE3B-208ENST00000538070 NUDT16L1Q9BRJ7 211 aaKnown RBP7.46□□□□□ -1.21
UBE3B-208ENST00000538070 PIGMQ9H3S5 423 aa7.46□□□□□ -1.21
UBE3B-208ENST00000538070 RHOFQ9HBH0 211 aa7.46□□□□□ -1.21
UBE3B-208ENST00000538070 AMDHD2Q9Y303 409 aa7.46□□□□□ -1.21
UBE3B-208ENST00000538070 LOC105371267A0A1B0GV96 52 aa7.46□□□□□ -1.22
UBE3B-208ENST00000538070 M0R036 132 aa7.46□□□□□ -1.22
UBE3B-208ENST00000538070 TUSC2O75896 110 aa7.46□□□□□ -1.22
UBE3B-208ENST00000538070 HLA-GP17693 338 aa7.46□□□□□ -1.22
UBE3B-208ENST00000538070 MPZP25189 248 aa7.46□□□□□ -1.22
UBE3B-208ENST00000538070 ALDH3B1P43353 468 aa7.46□□□□□ -1.22
UBE3B-208ENST00000538070 OR8B8Q15620 311 aa7.46□□□□□ -1.22
UBE3B-208ENST00000538070 FAM53AQ6NSI3 398 aaPredicted RBP7.46□□□□□ -1.22
UBE3B-208ENST00000538070 ETV3LQ6ZN32 361 aa7.46□□□□□ -1.22
UBE3B-208ENST00000538070 C20orf204Q6ZNR8 217 aa7.46□□□□□ -1.22
UBE3B-208ENST00000538070 ZNF818PQ6ZRF7 136 aa7.46□□□□□ -1.22
UBE3B-208ENST00000538070 ZNF808Q8N4W9 903 aaPredicted RBP7.46□□□□□ -1.22
UBE3B-208ENST00000538070 CCDC71LQ8N9Z2 235 aa7.46□□□□□ -1.22
UBE3B-208ENST00000538070 CD300LFQ8TDQ1 290 aa7.46□□□□□ -1.22
UBE3B-208ENST00000538070 REPIN1Q9BWE0 567 aaKnown RBP7.46□□□□□ -1.22
UBE3B-208ENST00000538070 MSL2Q9HCI7 577 aa7.46□□□□□ -1.22
UBE3B-208ENST00000538070 DUSP13Q9UII6 198 aa7.46□□□□□ -1.22
UBE3B-208ENST00000538070 FBXO7Q9Y3I1 522 aa7.46□□□□□ -1.22
UBE3B-208ENST00000538070 ATMQ13315 3056 aa7.46□□□□□ -1.22
UBE3B-208ENST00000538070 USF3Q68DE3 2245 aa7.46□□□□□ -1.22
UBE3B-208ENST00000538070 DMXL2Q8TDJ6 3036 aa7.46□□□□□ -1.22
UBE3B-208ENST00000538070 ST8SIA3O43173 380 aa7.46□□□□□ -1.22
UBE3B-208ENST00000538070 ARR3P36575 388 aa7.46□□□□□ -1.22
UBE3B-208ENST00000538070 TMEM187Q14656 261 aa7.46□□□□□ -1.22
UBE3B-208ENST00000538070 LIAT1Q6ZQX7 453 aa7.46□□□□□ -1.22
UBE3B-208ENST00000538070 PUSL1Q8N0Z8 303 aaKnown RBP7.46□□□□□ -1.22
UBE3B-208ENST00000538070 OR8U1Q8NH10 309 aa7.46□□□□□ -1.22
UBE3B-208ENST00000538070 RFESDQ8TAC1 157 aa7.46□□□□□ -1.22
UBE3B-208ENST00000538070 ASB13Q8WXK3 278 aa7.46□□□□□ -1.22
UBE3B-208ENST00000538070 AKR1E2Q96JD6 320 aa7.46□□□□□ -1.22
UBE3B-208ENST00000538070 AKAP13Q12802 2813 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 TMEM218A2RU14 115 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 PROB1E7EW31 1015 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 H0YL77 283 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 MPPED1O15442 326 aa7.45□□□□□ -1.22
UBE3B-208ENST00000538070 SERPINE2P07093 398 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms