RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 OR4C3Q8NH37 302 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 EMG1Q92979 244 aaKnown RBP9.28□□□□□ -0.92
RTN3-208ENST00000537981 RPUSD4Q96CM3 377 aaKnown RBP9.28□□□□□ -0.92
RTN3-208ENST00000537981 HSPB9Q9BQS6 159 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 MANBALQ9NQG1 85 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 ZNF701Q9NV72 531 aaPredicted RBP9.28□□□□□ -0.92
RTN3-208ENST00000537981 OR6C3Q9NZP0 311 aa9.28□□□□□ -0.92
RTN3-208ENST00000537981 C14orf166Q9Y224 244 aaKnown RBP9.28□□□□□ -0.92
RTN3-208ENST00000537981 SPTBN5Q9NRC6 3674 aaKnown RBP9.27□□□□□ -0.93
RTN3-208ENST00000537981 CRYM-AS1A6NIL9 109 aa9.27□□□□□ -0.93
RTN3-208ENST00000537981 CEBPZOSA8MTT3 80 aa9.27□□□□□ -0.93
RTN3-208ENST00000537981 TMEM50AO95807 157 aa9.27□□□□□ -0.93
RTN3-208ENST00000537981 TOMM40O96008 361 aa9.27□□□□□ -0.93
RTN3-208ENST00000537981 RNFT1Q5M7Z0 435 aa9.27□□□□□ -0.93
RTN3-208ENST00000537981 VN1R4Q7Z5H5 301 aa9.27□□□□□ -0.93
RTN3-208ENST00000537981 GABRG3Q99928 467 aa9.27□□□□□ -0.93
RTN3-208ENST00000537981 ZNF552Q9H707 407 aaPredicted RBP9.27□□□□□ -0.93
RTN3-208ENST00000537981 CCL26Q9Y258 94 aa9.27□□□□□ -0.93
RTN3-208ENST00000537981 RBM7Q9Y580 266 aaKnown RBP9.27□□□□□ -0.93
RTN3-208ENST00000537981 COX11Q9Y6N1 276 aa9.27□□□□□ -0.93
RTN3-208ENST00000537981 REV3LO60673 3130 aa9.27□□□□□ -0.93
RTN3-208ENST00000537981 HMGB3O15347 200 aaKnown RBP9.27□□□□□ -0.93
RTN3-208ENST00000537981 CDS2O95674 445 aa9.27□□□□□ -0.93
RTN3-208ENST00000537981 BCL2P10415 239 aa9.27□□□□□ -0.93
RTN3-208ENST00000537981 PSG1P11464 419 aa9.27□□□□□ -0.93
RTN3-208ENST00000537981 FXYD4P59646 89 aa9.27□□□□□ -0.93
RTN3-208ENST00000537981 ZNF154Q13106 437 aa9.27□□□□□ -0.93
RTN3-208ENST00000537981 MRPL49Q13405 166 aaKnown RBP9.27□□□□□ -0.93
RTN3-208ENST00000537981 TMEM183BQ1AE95 376 aa9.27□□□□□ -0.93
RTN3-208ENST00000537981 TCEAL5Q5H9L2 206 aa9.27□□□□□ -0.93
RTN3-208ENST00000537981 CBLN3Q6UW01 205 aa9.27□□□□□ -0.93
RTN3-208ENST00000537981 C1QL2Q7Z5L3 287 aa9.27□□□□□ -0.93
RTN3-208ENST00000537981 LINC01551Q86U37 167 aa9.27□□□□□ -0.93
RTN3-208ENST00000537981 C9orf40Q8IXQ3 194 aa9.27□□□□□ -0.93
RTN3-208ENST00000537981 APH1AQ96BI3 265 aa9.27□□□□□ -0.93
RTN3-208ENST00000537981 IMMP2LQ96T52 175 aa9.27□□□□□ -0.93
RTN3-208ENST00000537981 RSG1Q9BU20 258 aa9.27□□□□□ -0.93
RTN3-208ENST00000537981 MMP25Q9NPA2 562 aa9.27□□□□□ -0.93
RTN3-208ENST00000537981 LAMTOR2Q9Y2Q5 125 aa9.27□□□□□ -0.93
RTN3-208ENST00000537981 FRYQ5TBA9 3013 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 IGHV2-70DA0A0C4DH43 119 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 GDF9O60383 454 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 CTSVO60911 334 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 HPNP05981 417 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 CST5P28325 142 aaPredicted RBP9.26□□□□□ -0.93
RTN3-208ENST00000537981 BIDP55957 195 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 RPL23P62829 140 aaKnown RBP9.26□□□□□ -0.93
RTN3-208ENST00000537981 MRPS34P82930 218 aaKnown RBP9.26□□□□□ -0.93
RTN3-208ENST00000537981 TMEM187Q14656 261 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 OCIAD2Q56VL3 154 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 GPR157Q5UAW9 335 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 AMZ2Q86W34 360 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 D2HGDHQ8N465 521 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 DYRK2Q92630 601 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 SMIM7Q9BQ49 75 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 CST9LQ9H4G1 147 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 MCTS1Q9ULC4 181 aaKnown RBP9.26□□□□□ -0.93
RTN3-208ENST00000537981 HEBP2Q9Y5Z4 205 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 AQP7P3A6NL99 342 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 ZNF878C9JN71 531 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 H7BYZ3 331 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 FOXS1O43638 330 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 SSSCA1O60232 199 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 ZNF93P35789 620 aaPredicted RBP9.26□□□□□ -0.93
RTN3-208ENST00000537981 RRADP55042 308 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 MGAT2Q10469 447 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 PNRC1Q12796 327 aaPredicted RBP9.26□□□□□ -0.93
RTN3-208ENST00000537981 SLC24A5Q71RS6 500 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 ATOH7Q8N100 152 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 LGI3Q8N145 548 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 Q8N976 141 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 CDRT4Q8N9R6 151 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 OR52R1Q8NGF1 315 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 GATAD1Q8WUU5 269 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 KCNE4Q8WWG9 221 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 MOB3AQ96BX8 217 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 OR10A5Q9H207 317 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 TMEM9BQ9NQ34 198 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 FBXL7Q9UJT9 491 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 NXT1Q9UKK6 140 aaKnown RBP9.26□□□□□ -0.93
RTN3-208ENST00000537981 Q9Y3F1 56 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 TMEM14AQ9Y6G1 99 aa9.26□□□□□ -0.93
RTN3-208ENST00000537981 KNL1Q8NG31 2342 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 ODAMA1E959 279 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 F6UZH7 168 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 H3BP45 60 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 H7C4K7 107 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 HYPMO75409 117 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 ASAH2BP0C7U1 165 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 IL3RAP26951 378 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 ADMP35318 185 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 EFNA3P52797 238 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 FMODQ06828 376 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 SLC18B1Q6NT16 456 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 Q6ZN92 141 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 NUS1Q96E22 293 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 FAM103A1Q9BTL3 118 aaKnown RBP9.25□□□□□ -0.93
RTN3-208ENST00000537981 RTN4RQ9BZR6 473 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 RPRMQ9NS64 109 aa9.25□□□□□ -0.93
RTN3-208ENST00000537981 PRSS50Q9UI38 385 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms