RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 METAP1DQ6UB28 335 aaPredicted RBP3.96□□□□□ -1.78
CLIP1-207ENST00000536634 NANOGNBQ7Z5D8 188 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 TRIML2Q8N7C3 387 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 LY6G5BQ8NDX9 201 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 OR13G1Q8NGZ3 307 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 SETD6Q8TBK2 473 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 SUN5Q8TC36 379 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 PIFOQ8TCI5 191 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 MAGEB18Q96M61 343 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 C16orf45Q96MC5 204 aaPredicted RBP3.96□□□□□ -1.78
CLIP1-207ENST00000536634 TSC22D3Q99576 134 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 SSX3Q99909 188 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 ARMC7Q9H6L4 198 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 WDR76Q9H967 626 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 PLEKHA3Q9HB20 300 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 BCL2L10Q9HD36 194 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 NANSQ9NR45 359 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 UFSP2Q9NUQ7 469 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 PTTG3PQ9NZH4 202 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 ERVK-18Q9QC07 812 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 IFT52Q9Y366 437 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 KPTNQ9Y664 436 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 IGHV3OR15-7A0A075B7D8 119 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 OOEPA6NGQ2 149 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 LGALS8O00214 317 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 RFXANKO14593 260 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 BIRC5O15392 142 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 KRT75O95678 551 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 SHBGP04278 402 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 CST2P09228 141 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 NCALDP61601 193 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 CD47Q08722 323 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 IFFO1Q0D2I5 559 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 SNCBQ16143 134 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 LRRC75BQ2VPJ9 315 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 HCP5Q6MZN7 132 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 DHRS4L2Q6PKH6 230 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 Q8N2B8 174 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 ARL6IP6Q8N6S5 226 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 ZNF781Q8N8C0 355 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 OR8G5Q8NG78 346 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 SLC7A13Q8TCU3 470 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 LIPHQ8WWY8 451 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 PTP4A1Q93096 173 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 BPIFA2Q96DR5 249 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 RBMXL1Q96E39 390 aaKnown RBP3.95□□□□□ -1.78
CLIP1-207ENST00000536634 OR52E6Q96RD3 313 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 ECSITQ9BQ95 431 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 CHID1Q9BWS9 393 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 CDCA4Q9BXL8 241 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 TPT1P8Q9HAU6 139 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 CACYBPQ9HB71 228 aaKnown RBP3.95□□□□□ -1.78
CLIP1-207ENST00000536634 TMEM27Q9HBJ8 222 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 SLCO1B3Q9NPD5 702 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 ZNF581Q9P0T4 197 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 UBQLN2Q9UHD9 624 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 ZNF229Q9UJW7 825 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 ANGPT4Q9Y264 503 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 CAB39Q9Y376 341 aaPredicted RBP3.95□□□□□ -1.78
CLIP1-207ENST00000536634 TIMM10BQ9Y5J6 103 aa3.95□□□□□ -1.78
CLIP1-207ENST00000536634 TRAV34A0A0B4J273 112 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 LINC00854A0A1B0GVQ3 168 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 A0A1W2PRG6 482 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 SMIM23A6NLE4 172 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 IQCF6A8MYZ5 107 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 CENPBD1B2RD01 187 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 NDUFAB1O14561 156 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 ST8SIA3O43173 380 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 CHP2O43745 196 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 ANGPTL7O43827 346 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 UMPSP11172 480 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 ETS2P15036 469 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 FUT1P19526 365 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 BGNP21810 368 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 AQP2P41181 271 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 CD200P41217 278 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 DAP3P51398 398 aaKnown RBP3.94□□□□□ -1.78
CLIP1-207ENST00000536634 UBE2E1P51965 193 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 RGS8P57771 180 aaPredicted RBP3.94□□□□□ -1.78
CLIP1-207ENST00000536634 PCBD1P61457 104 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 OR8B8Q15620 311 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 FBXW12Q6X9E4 464 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 CCDC121Q6ZUS5 278 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 RBM45Q8IUH3 476 aaKnown RBP3.94□□□□□ -1.78
CLIP1-207ENST00000536634 SLC30A8Q8IWU4 369 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 FAM216BQ8N7L0 139 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 LINC00469Q8N7U9 141 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 SDR9C7Q8NEX9 313 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 OR4D11Q8NGI4 311 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 OR51G2Q8NGK0 314 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 OR11L1Q8NGX0 322 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 PFN4Q8NHR9 129 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 AENQ8WTP8 325 aaKnown RBP3.94□□□□□ -1.78
CLIP1-207ENST00000536634 ZNF426Q9BUY5 554 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 YIPF3Q9GZM5 350 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 C20orf27Q9GZN8 174 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 RAB18Q9NP72 206 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 MEPEQ9NQ76 525 aaPredicted RBP3.94□□□□□ -1.78
CLIP1-207ENST00000536634 POLE4Q9NR33 117 aa3.94□□□□□ -1.78
CLIP1-207ENST00000536634 SH3GLB1Q9Y371 365 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms