RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 FGF23Q9GZV9 251 aaPredicted RBP13.75□□□□□ -0.21
CHMP1A-202ENST00000535997 RIMS4Q9H426 269 aaPredicted RBP13.75□□□□□ -0.21
CHMP1A-202ENST00000535997 CALHM2Q9HA72 323 aa13.75□□□□□ -0.21
CHMP1A-202ENST00000535997 ZNF732B4DXR9 585 aa13.75□□□□□ -0.21
CHMP1A-202ENST00000535997 TRAPPC2LH3BP13 241 aa13.75□□□□□ -0.21
CHMP1A-202ENST00000535997 SS18L1O75177 396 aaPredicted RBP13.75□□□□□ -0.21
CHMP1A-202ENST00000535997 TUSC2O75896 110 aa13.75□□□□□ -0.21
CHMP1A-202ENST00000535997 CCL2P13500 99 aa13.75□□□□□ -0.21
CHMP1A-202ENST00000535997 FOLR2P14207 255 aa13.75□□□□□ -0.21
CHMP1A-202ENST00000535997 ARR3P36575 388 aa13.75□□□□□ -0.21
CHMP1A-202ENST00000535997 C9orf135Q5VTT2 229 aa13.75□□□□□ -0.21
CHMP1A-202ENST00000535997 SELENOHQ8IZQ5 122 aaKnown RBP13.75□□□□□ -0.21
CHMP1A-202ENST00000535997 HSD17B11Q8NBQ5 300 aa13.75□□□□□ -0.21
CHMP1A-202ENST00000535997 HIST1H2AAQ96QV6 131 aa13.75□□□□□ -0.21
CHMP1A-202ENST00000535997 SH3BGRL3Q9H299 93 aa13.75□□□□□ -0.21
CHMP1A-202ENST00000535997 PLK3Q9H4B4 646 aa13.75□□□□□ -0.21
CHMP1A-202ENST00000535997 RNF122Q9H9V4 155 aa13.75□□□□□ -0.21
CHMP1A-202ENST00000535997 LHX6Q9UPM6 363 aa13.75□□□□□ -0.21
CHMP1A-202ENST00000535997 ATP23Q9Y6H3 246 aa13.75□□□□□ -0.21
CHMP1A-202ENST00000535997 PCSK5Q92824 1860 aa13.75□□□□□ -0.21
CHMP1A-202ENST00000535997 CLEC18AA5D8T8 446 aa13.74□□□□□ -0.21
CHMP1A-202ENST00000535997 ZNF724A8MTY0 619 aa13.74□□□□□ -0.21
CHMP1A-202ENST00000535997 NOVA1P51513 510 aaKnown RBP13.74□□□□□ -0.21
CHMP1A-202ENST00000535997 RAB1AP62820 205 aa13.74□□□□□ -0.21
CHMP1A-202ENST00000535997 ZNF818PQ6ZRF7 136 aa13.74□□□□□ -0.21
CHMP1A-202ENST00000535997 GAPTQ8N292 157 aa13.74□□□□□ -0.21
CHMP1A-202ENST00000535997 CLEC18CQ8NCF0 446 aa13.74□□□□□ -0.21
CHMP1A-202ENST00000535997 LFNGQ8NES3 379 aa13.74□□□□□ -0.21
CHMP1A-202ENST00000535997 SIGLEC12Q96PQ1 595 aa13.74□□□□□ -0.21
CHMP1A-202ENST00000535997 PBDC1Q9BVG4 233 aa13.74□□□□□ -0.21
CHMP1A-202ENST00000535997 PLEKHF2Q9H8W4 249 aa13.74□□□□□ -0.21
CHMP1A-202ENST00000535997 SPACA1Q9HBV2 294 aa13.74□□□□□ -0.21
CHMP1A-202ENST00000535997 TNRC6AQ8NDV7 1962 aaKnown RBP13.74□□□□□ -0.21
CHMP1A-202ENST00000535997 SLC22A20A6NK97 555 aa13.74□□□□□ -0.21
CHMP1A-202ENST00000535997 CELA3AP09093 270 aa13.74□□□□□ -0.21
CHMP1A-202ENST00000535997 HS3ST6Q96QI5 342 aa13.74□□□□□ -0.21
CHMP1A-202ENST00000535997 SLC25A31Q9H0C2 315 aa13.74□□□□□ -0.21
CHMP1A-202ENST00000535997 SMDT1Q9H4I9 107 aa13.74□□□□□ -0.21
CHMP1A-202ENST00000535997 OPA3Q9H6K4 179 aa13.74□□□□□ -0.21
CHMP1A-202ENST00000535997 TUBA4BQ9H853 241 aa13.74□□□□□ -0.21
CHMP1A-202ENST00000535997 PRDM6Q9NQX0 595 aa13.74□□□□□ -0.21
CHMP1A-202ENST00000535997 AHCTF1Q8WYP5 2266 aa13.74□□□□□ -0.21
CHMP1A-202ENST00000535997 COL27A1Q8IZC6 1860 aaPredicted RBP13.73□□□□□ -0.21
CHMP1A-202ENST00000535997 A0A1B0GW64 132 aa13.73□□□□□ -0.21
CHMP1A-202ENST00000535997 FAM24AA6NFZ4 105 aa13.73□□□□□ -0.21
CHMP1A-202ENST00000535997 JMJD7P0C870 316 aa13.73□□□□□ -0.21
CHMP1A-202ENST00000535997 ZNF883P0CG24 379 aa13.73□□□□□ -0.21
CHMP1A-202ENST00000535997 VDAC1P21796 283 aa13.73□□□□□ -0.21
CHMP1A-202ENST00000535997 UCP1P25874 307 aa13.73□□□□□ -0.21
CHMP1A-202ENST00000535997 ZXDAP98168 799 aa13.73□□□□□ -0.21
CHMP1A-202ENST00000535997 HERPUD1Q15011 391 aa13.73□□□□□ -0.21
CHMP1A-202ENST00000535997 LINC00596Q86U02 117 aa13.73□□□□□ -0.21
CHMP1A-202ENST00000535997 CMTM1Q8IZ96 169 aa13.73□□□□□ -0.21
CHMP1A-202ENST00000535997 APH1AQ96BI3 265 aa13.73□□□□□ -0.21
CHMP1A-202ENST00000535997 POM121L2Q96KW2 1035 aa13.73□□□□□ -0.21
CHMP1A-202ENST00000535997 GPR87Q9BY21 358 aa13.73□□□□□ -0.21
CHMP1A-202ENST00000535997 LYRM2Q9NU23 88 aaPredicted RBP13.73□□□□□ -0.21
CHMP1A-202ENST00000535997 UMAD1C9J7I0 102 aa13.73□□□□□ -0.21
CHMP1A-202ENST00000535997 C1QL1O75973 258 aa13.73□□□□□ -0.21
CHMP1A-202ENST00000535997 NGFP01138 241 aa13.73□□□□□ -0.21
CHMP1A-202ENST00000535997 FOXG1P55316 489 aaPredicted RBP13.73□□□□□ -0.21
CHMP1A-202ENST00000535997 POLR2GP62487 172 aaKnown RBP eCLIP13.73□□□□□ -0.21
CHMP1A-202ENST00000535997 ID3Q02535 119 aa13.73□□□□□ -0.21
CHMP1A-202ENST00000535997 SLC35B3Q9H1N7 401 aa13.73□□□□□ -0.21
CHMP1A-202ENST00000535997 SMOC1Q9H4F8 434 aa13.73□□□□□ -0.21
CHMP1A-202ENST00000535997 RPS10P5Q9NQ39 176 aa13.73□□□□□ -0.21
CHMP1A-202ENST00000535997 CRIM1Q9NZV1 1036 aa13.73□□□□□ -0.21
CHMP1A-202ENST00000535997 ABI3Q9P2A4 366 aa13.73□□□□□ -0.21
CHMP1A-202ENST00000535997 ZNF503-AS2A6NEH8 195 aa13.72□□□□□ -0.21
CHMP1A-202ENST00000535997 CD300LBA8K4G0 201 aa13.72□□□□□ -0.21
CHMP1A-202ENST00000535997 K7N7A8 449 aa13.72□□□□□ -0.21
CHMP1A-202ENST00000535997 MMP9P14780 707 aa13.72□□□□□ -0.21
CHMP1A-202ENST00000535997 AKR1D1P51857 326 aa13.72□□□□□ -0.21
CHMP1A-202ENST00000535997 PLP2Q04941 152 aa13.72□□□□□ -0.21
CHMP1A-202ENST00000535997 RNF212Q495C1 297 aa13.72□□□□□ -0.21
CHMP1A-202ENST00000535997 NMSQ5H8A3 153 aa13.72□□□□□ -0.21
CHMP1A-202ENST00000535997 TMEM105Q8N8V8 129 aa13.72□□□□□ -0.21
CHMP1A-202ENST00000535997 NEK7Q8TDX7 302 aa13.72□□□□□ -0.21
CHMP1A-202ENST00000535997 IL22RA2Q969J5 263 aa13.72□□□□□ -0.21
CHMP1A-202ENST00000535997 CLCC1Q96S66 551 aa13.72□□□□□ -0.21
CHMP1A-202ENST00000535997 TTTY12Q9BZ98 90 aa13.72□□□□□ -0.21
CHMP1A-202ENST00000535997 ZDBF2Q9HCK1 2354 aa13.72□□□□□ -0.21
CHMP1A-202ENST00000535997 IGKV1D-13A0A0B4J2D9 117 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 C7orf77A4D0Y5 90 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 C9orf172C9J069 976 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 PROB1E7EW31 1015 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 HSPA12AO43301 675 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 ADAM20O43506 726 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 PITX3O75364 302 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 SLC34A2O95436 690 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 IGKV1-13P0DP09 117 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 MAGEA5P43359 124 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 OR1C1Q15619 314 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 TSC22D1Q15714 1073 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 CXorf66Q5JRM2 361 aaPredicted RBP13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 TMEM252Q8N6L7 170 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 LILRB1Q8NHL6 650 aaPredicted RBP13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 OR5P3Q8WZ94 311 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 C14orf79Q96F83 325 aa13.71□□□□□ -0.21
CHMP1A-202ENST00000535997 ZNF552Q9H707 407 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms