RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 ZP4Q12836 540 aa16.65■□□□□ 0.26
SMPD1-210ENST00000534405 H1FNTQ75WM6 255 aaPredicted RBP16.65■□□□□ 0.26
SMPD1-210ENST00000534405 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.65■□□□□ 0.26
SMPD1-210ENST00000534405 PHF3Q92576 2039 aaKnown RBP16.64■□□□□ 0.25
SMPD1-210ENST00000534405 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.64■□□□□ 0.25
SMPD1-210ENST00000534405 H3BML4 177 aa16.64■□□□□ 0.25
SMPD1-210ENST00000534405 EFNA2O43921 213 aa16.64■□□□□ 0.25
SMPD1-210ENST00000534405 KNG1P01042 644 aa16.64■□□□□ 0.25
SMPD1-210ENST00000534405 FAM3BP58499 235 aaPredicted RBP16.64■□□□□ 0.25
SMPD1-210ENST00000534405 HIST1H3AP68431 136 aa16.64■□□□□ 0.25
SMPD1-210ENST00000534405 IL13RA2Q14627 380 aa16.64■□□□□ 0.25
SMPD1-210ENST00000534405 ACOT6Q3I5F7 207 aaPredicted RBP16.64■□□□□ 0.25
SMPD1-210ENST00000534405 OR2AJ1Q8NGZ0 328 aa16.64■□□□□ 0.25
SMPD1-210ENST00000534405 ZNF705FA8MVS1 300 aaPredicted RBP16.64■□□□□ 0.25
SMPD1-210ENST00000534405 TMEM14DPA8MWL7 114 aa16.64■□□□□ 0.25
SMPD1-210ENST00000534405 TIAF1O95411 115 aa16.64■□□□□ 0.25
SMPD1-210ENST00000534405 ZNF705DP0CH99 300 aaPredicted RBP16.64■□□□□ 0.25
SMPD1-210ENST00000534405 ZNF705BP0CI00 300 aaPredicted RBP16.64■□□□□ 0.25
SMPD1-210ENST00000534405 TLE3Q04726 772 aa16.64■□□□□ 0.25
SMPD1-210ENST00000534405 ATP6V1FQ16864 119 aa16.64■□□□□ 0.25
SMPD1-210ENST00000534405 ACTL10Q5JWF8 245 aa16.64■□□□□ 0.25
SMPD1-210ENST00000534405 ANKRD37Q7Z713 158 aa16.64■□□□□ 0.25
SMPD1-210ENST00000534405 ST8SIA1Q92185 356 aa16.64■□□□□ 0.25
SMPD1-210ENST00000534405 RFNGQ9Y644 331 aa16.64■□□□□ 0.25
SMPD1-210ENST00000534405 IFNL4K9M1U5 179 aa16.63■□□□□ 0.25
SMPD1-210ENST00000534405 RRP8O43159 456 aaKnown RBP16.63■□□□□ 0.25
SMPD1-210ENST00000534405 CEACAM1P13688 526 aa16.63■□□□□ 0.25
SMPD1-210ENST00000534405 HSD11B1P28845 292 aa16.63■□□□□ 0.25
SMPD1-210ENST00000534405 CARD18P57730 90 aa16.63■□□□□ 0.25
SMPD1-210ENST00000534405 C17orf67Q0P5P2 114 aa16.63■□□□□ 0.25
SMPD1-210ENST00000534405 GCNT2Q8N0V5 402 aa16.63■□□□□ 0.25
SMPD1-210ENST00000534405 ZCCHC14Q8WYQ9 949 aaKnown RBP16.63■□□□□ 0.25
SMPD1-210ENST00000534405 NICN1Q9BSH3 213 aa16.63■□□□□ 0.25
SMPD1-210ENST00000534405 LAMP3Q9UQV4 416 aa16.63■□□□□ 0.25
SMPD1-210ENST00000534405 XRCC2O43543 280 aa16.62■□□□□ 0.25
SMPD1-210ENST00000534405 HBE1P02100 147 aa16.62■□□□□ 0.25
SMPD1-210ENST00000534405 AMY2BP19961 511 aa16.62■□□□□ 0.25
SMPD1-210ENST00000534405 DAP3P51398 398 aaKnown RBP16.62■□□□□ 0.25
SMPD1-210ENST00000534405 EMP2P54851 167 aa16.62■□□□□ 0.25
SMPD1-210ENST00000534405 GNB2P62879 340 aa16.62■□□□□ 0.25
SMPD1-210ENST00000534405 ZNF266Q14584 549 aa16.62■□□□□ 0.25
SMPD1-210ENST00000534405 PLAC9Q5JTB6 97 aa16.62■□□□□ 0.25
SMPD1-210ENST00000534405 OR8G2PQ6IF36 304 aa16.62■□□□□ 0.25
SMPD1-210ENST00000534405 TEX43Q6ZNM6 134 aa16.62■□□□□ 0.25
SMPD1-210ENST00000534405 RNF133Q8WVZ7 376 aa16.62■□□□□ 0.25
SMPD1-210ENST00000534405 PHF7Q9BWX1 381 aaPredicted RBP16.62■□□□□ 0.25
SMPD1-210ENST00000534405 PLSCR2Q9NRY7 297 aa16.62■□□□□ 0.25
SMPD1-210ENST00000534405 A0A0A6YYD4 124 aa16.62■□□□□ 0.25
SMPD1-210ENST00000534405 CD55P08174 381 aa16.62■□□□□ 0.25
SMPD1-210ENST00000534405 H2BFMP0C1H6 154 aa16.62■□□□□ 0.25
SMPD1-210ENST00000534405 HIST1H1DP16402 221 aaKnown RBP16.62■□□□□ 0.25
SMPD1-210ENST00000534405 WNT5AP41221 380 aa16.62■□□□□ 0.25
SMPD1-210ENST00000534405 CSNK1A1P48729 337 aa16.62■□□□□ 0.25
SMPD1-210ENST00000534405 RAB11AP62491 216 aa16.62■□□□□ 0.25
SMPD1-210ENST00000534405 RHBDD2Q6NTF9 364 aa16.62■□□□□ 0.25
SMPD1-210ENST00000534405 DNM1P34Q6PK57 102 aa16.62■□□□□ 0.25
SMPD1-210ENST00000534405 NUDT10Q8NFP7 164 aa16.62■□□□□ 0.25
SMPD1-210ENST00000534405 OR10S1Q8NGN2 331 aa16.62■□□□□ 0.25
SMPD1-210ENST00000534405 C11orf40Q8WZ69 217 aa16.62■□□□□ 0.25
SMPD1-210ENST00000534405 LPAR5Q9H1C0 372 aa16.62■□□□□ 0.25
SMPD1-210ENST00000534405 FAM206AQ9NX38 181 aa16.62■□□□□ 0.25
SMPD1-210ENST00000534405 HSBP1L1C9JCN9 74 aa16.61■□□□□ 0.25
SMPD1-210ENST00000534405 NDUFB8O95169 186 aa16.61■□□□□ 0.25
SMPD1-210ENST00000534405 TTRP02766 147 aa16.61■□□□□ 0.25
SMPD1-210ENST00000534405 OPN1LWP04000 364 aa16.61■□□□□ 0.25
SMPD1-210ENST00000534405 BIDP55957 195 aa16.61■□□□□ 0.25
SMPD1-210ENST00000534405 SLC22A24Q8N4F4 322 aa16.61■□□□□ 0.25
SMPD1-210ENST00000534405 MED12Q93074 2177 aa16.61■□□□□ 0.25
SMPD1-210ENST00000534405 LIPT2A6NK58 231 aa16.61■□□□□ 0.25
SMPD1-210ENST00000534405 SDCBPO00560 298 aaPredicted RBP16.61■□□□□ 0.25
SMPD1-210ENST00000534405 YPEL1O60688 119 aa16.61■□□□□ 0.25
SMPD1-210ENST00000534405 GZMHP20718 246 aa16.61■□□□□ 0.25
SMPD1-210ENST00000534405 WDR74Q6RFH5 385 aaPredicted RBP16.61■□□□□ 0.25
SMPD1-210ENST00000534405 ADAT3Q96EY9 351 aaPredicted RBP16.61■□□□□ 0.25
SMPD1-210ENST00000534405 YPEL2Q96QA6 119 aa16.61■□□□□ 0.25
SMPD1-210ENST00000534405 ALKBH7Q9BT30 221 aaPredicted RBP16.61■□□□□ 0.25
SMPD1-210ENST00000534405 RBKSQ9H477 322 aa16.61■□□□□ 0.25
SMPD1-210ENST00000534405 CRYM-AS1A6NIL9 109 aa16.6■□□□□ 0.25
SMPD1-210ENST00000534405 RAD51DO75771 328 aa16.6■□□□□ 0.25
SMPD1-210ENST00000534405 TAS2R46P59540 309 aa16.6■□□□□ 0.25
SMPD1-210ENST00000534405 WDR25Q64LD2 544 aaPredicted RBP16.6■□□□□ 0.25
SMPD1-210ENST00000534405 FBXW12Q6X9E4 464 aa16.6■□□□□ 0.25
SMPD1-210ENST00000534405 RNF144BQ7Z419 303 aa16.6■□□□□ 0.25
SMPD1-210ENST00000534405 P4HA3Q7Z4N8 544 aa16.6■□□□□ 0.25
SMPD1-210ENST00000534405 KMT5CQ86Y97 462 aa16.6■□□□□ 0.25
SMPD1-210ENST00000534405 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.6■□□□□ 0.25
SMPD1-210ENST00000534405 FBXL14Q8N1E6 418 aa16.6■□□□□ 0.25
SMPD1-210ENST00000534405 TMEM37Q8WXS4 190 aa16.6■□□□□ 0.25
SMPD1-210ENST00000534405 SLAMF6Q96DU3 332 aa16.6■□□□□ 0.25
SMPD1-210ENST00000534405 SDSLQ96GA7 329 aa16.6■□□□□ 0.25
SMPD1-210ENST00000534405 MS4A10Q96PG2 267 aa16.6■□□□□ 0.25
SMPD1-210ENST00000534405 IMMP2LQ96T52 175 aa16.6■□□□□ 0.25
SMPD1-210ENST00000534405 CALHM2Q9HA72 323 aa16.6■□□□□ 0.25
SMPD1-210ENST00000534405 EHFQ9NZC4 300 aa16.6■□□□□ 0.25
SMPD1-210ENST00000534405 IGLV3-12A0A075B6K2 115 aa16.6■□□□□ 0.25
SMPD1-210ENST00000534405 FOXK1P85037 733 aa16.6■□□□□ 0.25
SMPD1-210ENST00000534405 EWSR1Q01844 656 aaKnown RBP eCLIP16.6■□□□□ 0.25
SMPD1-210ENST00000534405 IL24Q13007 206 aa16.6■□□□□ 0.25
SMPD1-210ENST00000534405 LYG1Q8N1E2 194 aa16.6■□□□□ 0.25
SMPD1-210ENST00000534405 SEPSECSQ9HD40 501 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms