RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 OR1F12Q8NHA8 337 aa16.71■□□□□ 0.27
CAPN1-226ENST00000533820 DNASE2BQ8WZ79 361 aa16.71■□□□□ 0.27
CAPN1-226ENST00000533820 KCNJ16Q9NPI9 418 aa16.71■□□□□ 0.27
CAPN1-226ENST00000533820 LOC102725191A0A1B0GVB3 256 aa16.71■□□□□ 0.26
CAPN1-226ENST00000533820 CCL4P13236 92 aa16.71■□□□□ 0.26
CAPN1-226ENST00000533820 CALHM1Q8IU99 346 aa16.71■□□□□ 0.26
CAPN1-226ENST00000533820 GPR137BO60478 399 aa16.7■□□□□ 0.26
CAPN1-226ENST00000533820 TRAPPC6AO75865 159 aa16.7■□□□□ 0.26
CAPN1-226ENST00000533820 CST7O76096 145 aa16.7■□□□□ 0.26
CAPN1-226ENST00000533820 DUSP1P28562 367 aa16.7■□□□□ 0.26
CAPN1-226ENST00000533820 FAM27BQ5VT28 67 aa16.7■□□□□ 0.26
CAPN1-226ENST00000533820 RTL6Q6ICC9 239 aa16.7■□□□□ 0.26
CAPN1-226ENST00000533820 SLC25A26Q70HW3 274 aa16.7■□□□□ 0.26
CAPN1-226ENST00000533820 MSI2Q96DH6 328 aaKnown RBP16.7■□□□□ 0.26
CAPN1-226ENST00000533820 TAAR9Q96RI9 348 aa16.7■□□□□ 0.26
CAPN1-226ENST00000533820 NDUFAF3Q9BU61 184 aa16.7■□□□□ 0.26
CAPN1-226ENST00000533820 DDA1Q9BW61 102 aa16.7■□□□□ 0.26
CAPN1-226ENST00000533820 SNHG12Q9BXW3 62 aa16.7■□□□□ 0.26
CAPN1-226ENST00000533820 FOXD3Q9UJU5 478 aaPredicted RBP16.7■□□□□ 0.26
CAPN1-226ENST00000533820 DNAJC13O75165 2243 aa16.7■□□□□ 0.26
CAPN1-226ENST00000533820 CXCL13O43927 109 aa16.7■□□□□ 0.26
CAPN1-226ENST00000533820 CCL2P13500 99 aa16.7■□□□□ 0.26
CAPN1-226ENST00000533820 ECI1P42126 302 aa16.7■□□□□ 0.26
CAPN1-226ENST00000533820 P2RY1P47900 373 aa16.7■□□□□ 0.26
CAPN1-226ENST00000533820 ZNF674Q2M3X9 581 aa16.7■□□□□ 0.26
CAPN1-226ENST00000533820 GPR137CQ8N3F9 429 aa16.7■□□□□ 0.26
CAPN1-226ENST00000533820 OR14L1PQ8NHC6 308 aa16.7■□□□□ 0.26
CAPN1-226ENST00000533820 SPSB1Q96BD6 273 aa16.7■□□□□ 0.26
CAPN1-226ENST00000533820 ZNF700Q9H0M5 742 aa16.7■□□□□ 0.26
CAPN1-226ENST00000533820 ZNF286AQ9HBT8 521 aa16.7■□□□□ 0.26
CAPN1-226ENST00000533820 LY6G6EA0A0G2JKS1 128 aa16.69■□□□□ 0.26
CAPN1-226ENST00000533820 SYNGR3O43761 229 aa16.69■□□□□ 0.26
CAPN1-226ENST00000533820 SULT1A1P50225 295 aa16.69■□□□□ 0.26
CAPN1-226ENST00000533820 CNN3Q15417 329 aaKnown RBP16.69■□□□□ 0.26
CAPN1-226ENST00000533820 MRPL14Q6P1L8 145 aaKnown RBP16.69■□□□□ 0.26
CAPN1-226ENST00000533820 SLC23A3Q6PIS1 610 aa16.69■□□□□ 0.26
CAPN1-226ENST00000533820 THNSL2Q86YJ6 484 aa16.69■□□□□ 0.26
CAPN1-226ENST00000533820 LGI3Q8N145 548 aa16.69■□□□□ 0.26
CAPN1-226ENST00000533820 ASCL3Q9NQ33 180 aa16.69■□□□□ 0.26
CAPN1-226ENST00000533820 MRPS17Q9Y2R5 130 aaKnown RBP16.69■□□□□ 0.26
CAPN1-226ENST00000533820 U3KQA8 63 aa16.69■□□□□ 0.26
CAPN1-226ENST00000533820 ZNF587BE7ETH6 402 aa16.69■□□□□ 0.26
CAPN1-226ENST00000533820 PPP1R2P9O14990 202 aa16.69■□□□□ 0.26
CAPN1-226ENST00000533820 DLEU1O43261 78 aa16.69■□□□□ 0.26
CAPN1-226ENST00000533820 CRYGSP22914 178 aa16.69■□□□□ 0.26
CAPN1-226ENST00000533820 PSG4Q00888 419 aa16.69■□□□□ 0.26
CAPN1-226ENST00000533820 CEACAM16Q2WEN9 425 aa16.69■□□□□ 0.26
CAPN1-226ENST00000533820 SCRT1Q9BWW7 348 aa16.69■□□□□ 0.26
CAPN1-226ENST00000533820 ZDBF2Q9HCK1 2354 aa16.69■□□□□ 0.26
CAPN1-226ENST00000533820 TNFSF12O43508 249 aa16.68■□□□□ 0.26
CAPN1-226ENST00000533820 SSSCA1O60232 199 aa16.68■□□□□ 0.26
CAPN1-226ENST00000533820 UMODP07911 640 aa16.68■□□□□ 0.26
CAPN1-226ENST00000533820 SSR4P51571 173 aa16.68■□□□□ 0.26
CAPN1-226ENST00000533820 DSCR4P56555 118 aaPredicted RBP16.68■□□□□ 0.26
CAPN1-226ENST00000533820 MRPS34P82930 218 aaKnown RBP16.68■□□□□ 0.26
CAPN1-226ENST00000533820 MALLQ13021 153 aa16.68■□□□□ 0.26
CAPN1-226ENST00000533820 GNMTQ14749 295 aa16.68■□□□□ 0.26
CAPN1-226ENST00000533820 HAGHQ16775 308 aa16.68■□□□□ 0.26
CAPN1-226ENST00000533820 OR14J1Q9UGF5 321 aa16.68■□□□□ 0.26
CAPN1-226ENST00000533820 UBE2J1Q9Y385 318 aaPredicted RBP16.68■□□□□ 0.26
CAPN1-226ENST00000533820 SEC11BP0C7V7 166 aa16.68■□□□□ 0.26
CAPN1-226ENST00000533820 HIST1H3AP68431 136 aa16.68■□□□□ 0.26
CAPN1-226ENST00000533820 RAB35Q15286 201 aa16.68■□□□□ 0.26
CAPN1-226ENST00000533820 HIST2H3PS2Q5TEC6 136 aa16.68■□□□□ 0.26
CAPN1-226ENST00000533820 AAED1Q7RTV5 226 aa16.68■□□□□ 0.26
CAPN1-226ENST00000533820 RPS19BP1Q86WX3 136 aaKnown RBP16.68■□□□□ 0.26
CAPN1-226ENST00000533820 ZNF664Q8N3J9 261 aa16.68■□□□□ 0.26
CAPN1-226ENST00000533820 CPEB3Q8NE35 698 aaKnown RBP16.68■□□□□ 0.26
CAPN1-226ENST00000533820 ZPBPQ9BS86 351 aa16.68■□□□□ 0.26
CAPN1-226ENST00000533820 ZNF727A8MUV8 499 aa16.68■□□□□ 0.26
CAPN1-226ENST00000533820 ZNF705GA8MUZ8 300 aaPredicted RBP16.68■□□□□ 0.26
CAPN1-226ENST00000533820 VAMP5O95183 116 aa16.68■□□□□ 0.26
CAPN1-226ENST00000533820 EWSR1Q01844 656 aaKnown RBP eCLIP16.68■□□□□ 0.26
CAPN1-226ENST00000533820 CXorf66Q5JRM2 361 aaPredicted RBP16.68■□□□□ 0.26
CAPN1-226ENST00000533820 SAPCD1Q5SSQ6 148 aa16.68■□□□□ 0.26
CAPN1-226ENST00000533820 CLEC2AQ6UVW9 174 aa16.68■□□□□ 0.26
CAPN1-226ENST00000533820 OR2G3Q8NGZ4 309 aa16.68■□□□□ 0.26
CAPN1-226ENST00000533820 NEK7Q8TDX7 302 aa16.68■□□□□ 0.26
CAPN1-226ENST00000533820 C18orf12Q96KH6 178 aa16.68■□□□□ 0.26
CAPN1-226ENST00000533820 HS3ST6Q96QI5 342 aa16.68■□□□□ 0.26
CAPN1-226ENST00000533820 IL36RNQ9UBH0 155 aa16.68■□□□□ 0.26
CAPN1-226ENST00000533820 KNTC1P50748 2209 aa16.67■□□□□ 0.26
CAPN1-226ENST00000533820 TCN2P20062 427 aa16.67■□□□□ 0.26
CAPN1-226ENST00000533820 EPHA8P29322 1005 aaPredicted RBP16.67■□□□□ 0.26
CAPN1-226ENST00000533820 IL2RGP31785 369 aa16.67■□□□□ 0.26
CAPN1-226ENST00000533820 PMELP40967 661 aa16.67■□□□□ 0.26
CAPN1-226ENST00000533820 RPS18P62269 152 aaKnown RBP16.67■□□□□ 0.26
CAPN1-226ENST00000533820 P4HA3Q7Z4N8 544 aa16.67■□□□□ 0.26
CAPN1-226ENST00000533820 LYPD6BQ8NI32 183 aa16.67■□□□□ 0.26
CAPN1-226ENST00000533820 NAT6Q93015 286 aa16.67■□□□□ 0.26
CAPN1-226ENST00000533820 SYT3Q9BQG1 590 aa16.67■□□□□ 0.26
CAPN1-226ENST00000533820 PCED1AQ9H1Q7 454 aa16.67■□□□□ 0.26
CAPN1-226ENST00000533820 OR51B6Q9H340 312 aa16.67■□□□□ 0.26
CAPN1-226ENST00000533820 DECR2Q9NUI1 292 aa16.67■□□□□ 0.26
CAPN1-226ENST00000533820 HS3ST3B1Q9Y662 390 aa16.67■□□□□ 0.26
CAPN1-226ENST00000533820 URGCP-MRPS24S4R325 110 aa16.67■□□□□ 0.26
CAPN1-226ENST00000533820 IGHV1-45A0A0A0MS14 117 aa16.67■□□□□ 0.26
CAPN1-226ENST00000533820 CA11O75493 328 aa16.67■□□□□ 0.26
CAPN1-226ENST00000533820 RFPL3SP0C7P2 107 aa16.67■□□□□ 0.26
CAPN1-226ENST00000533820 CARD18P57730 90 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms