RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 SOD3P08294 240 aa15.6■□□□□ 0.09
SMPD1-208ENST00000533123 IKZF1Q13422 519 aa15.6■□□□□ 0.09
SMPD1-208ENST00000533123 ATPAF1Q5TC12 328 aaPredicted RBP15.6■□□□□ 0.09
SMPD1-208ENST00000533123 ZNF680Q8NEM1 530 aa15.6■□□□□ 0.09
SMPD1-208ENST00000533123 OR11H4Q8NGC9 324 aa15.6■□□□□ 0.09
SMPD1-208ENST00000533123 SLC25A21Q9BQT8 299 aaPredicted RBP15.6■□□□□ 0.09
SMPD1-208ENST00000533123 RANBP3Q9H6Z4 567 aaPredicted RBP15.6■□□□□ 0.09
SMPD1-208ENST00000533123 HEXA-AS1Q9H8Q6 139 aa15.6■□□□□ 0.09
SMPD1-208ENST00000533123 VSIG4Q9Y279 399 aa15.6■□□□□ 0.09
SMPD1-208ENST00000533123 TMEM82A0PJX8 343 aa15.59■□□□□ 0.09
SMPD1-208ENST00000533123 TMEM210A6NLX4 147 aa15.59■□□□□ 0.09
SMPD1-208ENST00000533123 MPZP25189 248 aa15.59■□□□□ 0.09
SMPD1-208ENST00000533123 CCL8P80075 99 aa15.59■□□□□ 0.09
SMPD1-208ENST00000533123 TNFAIP6P98066 277 aaPredicted RBP15.59■□□□□ 0.09
SMPD1-208ENST00000533123 IL24Q13007 206 aa15.59■□□□□ 0.09
SMPD1-208ENST00000533123 ZNF826PQ6ZT77 177 aa15.59■□□□□ 0.09
SMPD1-208ENST00000533123 OR5H2Q8NGV7 314 aa15.59■□□□□ 0.09
SMPD1-208ENST00000533123 CMSS1Q9BQ75 279 aaKnown RBP15.59■□□□□ 0.09
SMPD1-208ENST00000533123 ZNF222Q9UK12 451 aa15.59■□□□□ 0.09
SMPD1-208ENST00000533123 A6NLC8 198 aa15.59■□□□□ 0.09
SMPD1-208ENST00000533123 J3QT63 122 aa15.59■□□□□ 0.09
SMPD1-208ENST00000533123 SDCBPO00560 298 aaPredicted RBP15.59■□□□□ 0.09
SMPD1-208ENST00000533123 DANCRP0C864 163 aa15.59■□□□□ 0.09
SMPD1-208ENST00000533123 PRKACAP17612 351 aa15.59■□□□□ 0.09
SMPD1-208ENST00000533123 CD200P41217 278 aa15.59■□□□□ 0.09
SMPD1-208ENST00000533123 ZNF626Q68DY1 528 aa15.59■□□□□ 0.09
SMPD1-208ENST00000533123 C11orf53Q8IXP5 236 aa15.59■□□□□ 0.09
SMPD1-208ENST00000533123 ITLN1Q8WWA0 313 aa15.59■□□□□ 0.09
SMPD1-208ENST00000533123 MEGF10Q96KG7 1140 aa15.59■□□□□ 0.09
SMPD1-208ENST00000533123 PKIBQ9C010 78 aa15.59■□□□□ 0.09
SMPD1-208ENST00000533123 CLEC4MQ9H2X3 399 aaPredicted RBP15.59■□□□□ 0.09
SMPD1-208ENST00000533123 MS4A5Q9H3V2 200 aa15.59■□□□□ 0.09
SMPD1-208ENST00000533123 FN3KRPQ9HA64 309 aa15.59■□□□□ 0.09
SMPD1-208ENST00000533123 CD8AP01732 235 aa15.58■□□□□ 0.08
SMPD1-208ENST00000533123 IL5P05113 134 aa15.58■□□□□ 0.08
SMPD1-208ENST00000533123 SULT1A3P0DMM9 295 aa15.58■□□□□ 0.08
SMPD1-208ENST00000533123 SULT1A4P0DMN0 295 aa15.58■□□□□ 0.08
SMPD1-208ENST00000533123 FUT3P21217 361 aa15.58■□□□□ 0.08
SMPD1-208ENST00000533123 UBE2MP61081 183 aaKnown RBP15.58■□□□□ 0.08
SMPD1-208ENST00000533123 MZT1Q08AG7 82 aa15.58■□□□□ 0.08
SMPD1-208ENST00000533123 VAX1Q5SQQ9 334 aa15.58■□□□□ 0.08
SMPD1-208ENST00000533123 IL19Q9UHD0 177 aa15.58■□□□□ 0.08
SMPD1-208ENST00000533123 LAMP3Q9UQV4 416 aa15.58■□□□□ 0.08
SMPD1-208ENST00000533123 SPG11Q96JI7 2443 aa15.58■□□□□ 0.08
SMPD1-208ENST00000533123 HSPB6O14558 160 aa15.58■□□□□ 0.08
SMPD1-208ENST00000533123 CREBL2O60519 120 aaPredicted RBP15.58■□□□□ 0.08
SMPD1-208ENST00000533123 GOSR1O95249 250 aa15.58■□□□□ 0.08
SMPD1-208ENST00000533123 FCGR3AP08637 254 aa15.58■□□□□ 0.08
SMPD1-208ENST00000533123 TNFSF4P23510 183 aa15.58■□□□□ 0.08
SMPD1-208ENST00000533123 ACTBL2Q562R1 376 aa15.58■□□□□ 0.08
SMPD1-208ENST00000533123 Q6ZPA2 131 aa15.58■□□□□ 0.08
SMPD1-208ENST00000533123 OR8H3Q8N146 312 aa15.58■□□□□ 0.08
SMPD1-208ENST00000533123 CBLN4Q9NTU7 201 aa15.58■□□□□ 0.08
SMPD1-208ENST00000533123 ANXA3P12429 323 aa15.57■□□□□ 0.08
SMPD1-208ENST00000533123 GMFBP60983 142 aa15.57■□□□□ 0.08
SMPD1-208ENST00000533123 HOXA4Q00056 320 aaPredicted RBP15.57■□□□□ 0.08
SMPD1-208ENST00000533123 CHRFAM7AQ494W8 412 aa15.57■□□□□ 0.08
SMPD1-208ENST00000533123 NHLRC3Q5JS37 347 aa15.57■□□□□ 0.08
SMPD1-208ENST00000533123 DIRC2Q96SL1 478 aa15.57■□□□□ 0.08
SMPD1-208ENST00000533123 VRK1Q99986 396 aaPredicted RBP15.57■□□□□ 0.08
SMPD1-208ENST00000533123 GPN1Q9HCN4 374 aaPredicted RBP15.57■□□□□ 0.08
SMPD1-208ENST00000533123 EHFQ9NZC4 300 aa15.57■□□□□ 0.08
SMPD1-208ENST00000533123 DSCAMO60469 2012 aa15.57■□□□□ 0.08
SMPD1-208ENST00000533123 USF3Q68DE3 2245 aa15.57■□□□□ 0.08
SMPD1-208ENST00000533123 ADH4P08319 380 aa15.56■□□□□ 0.08
SMPD1-208ENST00000533123 ZMYND11Q15326 602 aa15.56■□□□□ 0.08
SMPD1-208ENST00000533123 C4orf46Q504U0 113 aa15.56■□□□□ 0.08
SMPD1-208ENST00000533123 MUC20Q8N307 709 aaPredicted RBP15.56■□□□□ 0.08
SMPD1-208ENST00000533123 OR5AP2Q8NGF4 316 aa15.56■□□□□ 0.08
SMPD1-208ENST00000533123 TLNRD1Q9H1K6 362 aa15.56■□□□□ 0.08
SMPD1-208ENST00000533123 TREM2Q9NZC2 230 aa15.56■□□□□ 0.08
SMPD1-208ENST00000533123 PTBP3O95758 552 aaKnown RBP15.56■□□□□ 0.08
SMPD1-208ENST00000533123 TAS2R46P59540 309 aa15.56■□□□□ 0.08
SMPD1-208ENST00000533123 TSPAN5P62079 268 aa15.56■□□□□ 0.08
SMPD1-208ENST00000533123 MOGAT3Q86VF5 341 aa15.56■□□□□ 0.08
SMPD1-208ENST00000533123 FAM58AQ8N1B3 248 aa15.56■□□□□ 0.08
SMPD1-208ENST00000533123 DECR2Q9NUI1 292 aa15.56■□□□□ 0.08
SMPD1-208ENST00000533123 C1orf123Q9NWV4 160 aa15.56■□□□□ 0.08
SMPD1-208ENST00000533123 NUP50Q9UKX7 468 aa15.56■□□□□ 0.08
SMPD1-208ENST00000533123 hCG_1807616A0A1W2PRN6 198 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 FAM90A10PA6NDY2 464 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 FAM90A18PA6NE21 464 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 FAM90A16PA6NEW6 464 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 FAM90A20PA6NIJ5 464 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 FAM90A8PA6NJQ4 464 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 FAM90A7PA6NKC0 464 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 FAM90A22PA8MWA6 464 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 SNRPGP15A8MWD9 76 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 FAM90A12PA8MX19 464 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 FAM90A5PA8MXJ8 464 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 FAM90A23PA8MXZ1 464 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 OR4E1P0C645 316 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 FAM90A15PP0C7V4 464 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 FAM90A13PP0C7W8 464 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 FAM90A14PP0C7W9 464 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 FAM90A24PP0C7X0 464 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 NPY4RP50391 375 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 C11orf71Q6IPW1 123 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 WDR82Q6UXN9 313 aa15.55■□□□□ 0.08
SMPD1-208ENST00000533123 DTX2Q86UW9 622 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms