RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 OR8B3Q8NGG8 313 aa7.09□□□□□ -1.27
NEDD8-MDP1-201ENST00000530579 OR4K15Q8NH41 348 aa7.09□□□□□ -1.27
NEDD8-MDP1-201ENST00000530579 PLPPR1Q8TBJ4 325 aa7.09□□□□□ -1.27
NEDD8-MDP1-201ENST00000530579 GPX8Q8TED1 209 aa7.09□□□□□ -1.27
NEDD8-MDP1-201ENST00000530579 SMIM4Q8WVI0 70 aa7.09□□□□□ -1.27
NEDD8-MDP1-201ENST00000530579 LURAP1Q96LR2 239 aa7.09□□□□□ -1.27
NEDD8-MDP1-201ENST00000530579 OR8B2Q96RD0 313 aa7.09□□□□□ -1.27
NEDD8-MDP1-201ENST00000530579 SDHCQ99643 169 aaPredicted RBP7.09□□□□□ -1.27
NEDD8-MDP1-201ENST00000530579 PIMREGQ9BSJ6 248 aa7.09□□□□□ -1.27
NEDD8-MDP1-201ENST00000530579 SHARPINQ9H0F6 387 aa7.09□□□□□ -1.27
NEDD8-MDP1-201ENST00000530579 FAM234AQ9H0X4 552 aa7.09□□□□□ -1.27
NEDD8-MDP1-201ENST00000530579 C12orf4Q9NQ89 552 aa7.09□□□□□ -1.27
NEDD8-MDP1-201ENST00000530579 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.09□□□□□ -1.27
NEDD8-MDP1-201ENST00000530579 DUX4Q9UBX2 424 aa7.09□□□□□ -1.27
NEDD8-MDP1-201ENST00000530579 SLC25A10Q9UBX3 287 aaPredicted RBP7.09□□□□□ -1.27
NEDD8-MDP1-201ENST00000530579 KLK11Q9UBX7 282 aa7.09□□□□□ -1.27
NEDD8-MDP1-201ENST00000530579 ZNF230Q9UIE0 474 aaPredicted RBP7.09□□□□□ -1.27
NEDD8-MDP1-201ENST00000530579 KIF25Q9UIL4 384 aa7.09□□□□□ -1.27
NEDD8-MDP1-201ENST00000530579 TRAPPC2LQ9UL33 140 aa7.09□□□□□ -1.27
NEDD8-MDP1-201ENST00000530579 USP9XQ93008 2570 aaPredicted RBP7.09□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 MEIKINA0A087WXM9 373 aa7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 TRAV39A0A0B4J263 110 aa7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 NDUFS8O00217 210 aa7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 DVL1O14640 695 aa7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 UPK1BO75841 260 aa7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 ECDO95905 644 aaPredicted RBP7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 DTYMKP23919 212 aa7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 GIFP27352 417 aa7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 RCVRNP35243 200 aa7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 GDNFP39905 211 aa7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 GLIPR1P48060 266 aa7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 ACTBP60709 375 aa7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 ACTG1P63261 375 aa7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 DCTN2Q13561 401 aaKnown RBP7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 CLEC12BQ2HXU8 276 aa7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 SHEQ5VZ18 495 aa7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 SLC35E4Q6ICL7 350 aa7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 ZNF497Q6ZNH5 498 aa7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 HOGA1Q86XE5 327 aa7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 GVQW1Q8N7I0 195 aa7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 TPRX1Q8N7U7 411 aa7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 MRPL30Q8TCC3 161 aaKnown RBP7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 C10orf105Q8TEF2 133 aa7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 MAFIPQ8WZ33 124 aa7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 H1FXQ92522 213 aaKnown RBP7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 NEIL1Q96FI4 390 aaPredicted RBP7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 OCSTAMPQ9BR26 566 aa7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 KCNIP1Q9NZI2 227 aa7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 KAAG1Q9UBP8 84 aa7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 MTFP1Q9UDX5 166 aa7.08□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 FLNCQ14315 2725 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 A0A1W2PQ09 198 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 MEX3AA1L020 520 aaKnown RBP7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 ZNF736B4DX44 427 aaPredicted RBP7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 NAPSAO96009 420 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 CSN2P05814 226 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 FCGR3AP08637 254 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 WNT2P09544 360 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 CSF1P09603 554 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 HLA-DMAP28067 261 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 P2RX3P56373 397 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 AP3S2P59780 193 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 ARPC4P59998 168 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 SSBP1Q04837 148 aaKnown RBP7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 CHRFAM7AQ494W8 412 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 RSBN1Q5VWQ0 802 aaPredicted RBP7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 DNM1P46Q6ZS02 220 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 LRRC75A-AS1Q8N1F1 130 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 FGFRL1Q8N441 504 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 TOMM5Q8N4H5 51 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 ZNF565Q8N9K5 539 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 TMEM229BQ8NBD8 167 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 BEST4Q8NFU0 473 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 NINJ1Q92982 152 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 MBD6Q96DN6 1003 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 COQ2Q96H96 371 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 COX4I2Q96KJ9 171 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 DCTN5Q9BTE1 182 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 BPESC1Q9GZL8 116 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 PATZ1Q9HBE1 687 aaKnown RBP7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 ZNF286AQ9HBT8 521 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 Q9N2K0 584 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 TAS2R8Q9NYW2 309 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 CTSZQ9UBR2 303 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 CLN8Q9UBY8 286 aa7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 RBMX2Q9Y388 322 aaKnown RBP7.07□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 IGHV4-30-2A0A087WSY4 118 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 TRBV6-6A0A0A6YYG2 114 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 KIR2DS1A0A191URI9 304 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 hADV38S2A0JD32 116 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 ODAMA1E959 279 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 POM121CA8CG34 1229 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 CENPXA8MT69 81 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 TRDCB7Z8K6 153 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 RAB3DO95716 219 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 PMP2P02689 132 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 CD3DP04234 171 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 HEXAP06865 529 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 GSTT2P0CG29 244 aa7.06□□□□□ -1.28
NEDD8-MDP1-201ENST00000530579 RCC1P18754 421 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms