RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 MAGEB3O15480 346 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 EDF1O60869 148 aaKnown RBP3.56□□□□□ -1.84
CSDE1-212ENST00000529046 OPN1SWP03999 348 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 UMPSP11172 480 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 CCL2P13500 99 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 GSTM3P21266 225 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 MSR1P21757 451 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 KDELR2P33947 212 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 MPV17P39210 176 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 AQP2P41181 271 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 GDI2P50395 445 aaKnown RBP3.56□□□□□ -1.84
CSDE1-212ENST00000529046 CNN1P51911 297 aaKnown RBP3.56□□□□□ -1.84
CSDE1-212ENST00000529046 MTPNP58546 118 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 ERVS71-1P61550 626 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 PPP1CBP62140 327 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 LSM6P62312 80 aaKnown RBP3.56□□□□□ -1.84
CSDE1-212ENST00000529046 UBA52P62987 128 aaKnown RBP3.56□□□□□ -1.84
CSDE1-212ENST00000529046 HERV-K104P63124 156 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 ACTG1P63261 375 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 PAX2Q02962 417 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 HSF2Q03933 536 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 PRKCDQ05655 676 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 SCRN3Q0VDG4 424 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 IL24Q13007 206 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 ZNF154Q13106 437 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 PDZK1IP1Q13113 114 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 SPATA46Q5T0L3 261 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 ZNF774Q6NX45 483 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 FBXW12Q6X9E4 464 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 ZNF573Q86YE8 665 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 RBM45Q8IUH3 476 aaKnown RBP3.56□□□□□ -1.84
CSDE1-212ENST00000529046 CDH26Q8IXH8 852 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 DEFB108BQ8NET1 73 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 OR4Q3Q8NH05 313 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 SLC25A40Q8TBP6 338 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 ITLN1Q8WWA0 313 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 CCL17Q92583 94 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 PRRC1Q96M27 445 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 GPX7Q96SL4 187 aaPredicted RBP3.56□□□□□ -1.84
CSDE1-212ENST00000529046 GAL3ST1Q99999 423 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 ECSITQ9BQ95 431 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 OR2J1Q9GZK6 312 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 TMEM106BQ9NUM4 274 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 GID8Q9NWU2 228 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 MLXQ9UH92 298 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 PURGQ9UJV8 347 aaKnown RBP3.56□□□□□ -1.84
CSDE1-212ENST00000529046 FBXO7Q9Y3I1 522 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 INSIG2Q9Y5U4 225 aa3.56□□□□□ -1.84
CSDE1-212ENST00000529046 IGKV1D-43A0A0B4J1Z2 117 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 KIR2DS1A0A191URI9 304 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 FAM230AA0A1W2PPH8 454 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 C5orf49A4QMS7 147 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 ZSCAN5BA6NJL1 495 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 FAM220BPB1ANY3 271 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 TRAPPC2LH3BP13 241 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 FXYD1O00168 92 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 NDUFAB1O14561 156 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 SLC2A10O95528 541 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 WNT2P09544 360 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 OR9G9P0C7N8 305 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 LAP3P28838 519 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 ID1P41134 155 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 TAS2R41P59536 307 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 HIST1H3AP68431 136 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 TNFAIP6P98066 277 aaPredicted RBP3.55□□□□□ -1.84
CSDE1-212ENST00000529046 CD47Q08722 323 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 PSG7Q13046 419 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 AQP6Q13520 282 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 KLF5Q13887 457 aaPredicted RBP3.55□□□□□ -1.84
CSDE1-212ENST00000529046 DGCR6Q14129 220 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 SELPLGQ14242 412 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 ENDOGQ14249 297 aaKnown RBP3.55□□□□□ -1.84
CSDE1-212ENST00000529046 TRAM2Q15035 370 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 MAPRE2Q15555 327 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 SGCAQ16586 387 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 ANKRD55Q3KP44 614 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 TMEM255AQ5JRV8 349 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 NHLRC3Q5JS37 347 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 KLF17Q5JT82 389 aaPredicted RBP3.55□□□□□ -1.84
CSDE1-212ENST00000529046 HIST2H3PS2Q5TEC6 136 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 LEMD1Q68G75 181 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 LRRN1Q6UXK5 716 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 HIST2H3AQ71DI3 136 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 FAM122BQ7Z309 247 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 ARPINQ7Z6K5 226 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 OAFQ86UD1 273 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 OFCC1Q8IZS5 231 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 LRRC18Q8N456 261 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 BPIFB2Q8N4F0 458 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 SAMD12Q8N8I0 201 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 OR5L1Q8NGL2 311 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 PFN4Q8NHR9 129 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 C10orf82Q8WW14 230 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 ACOT11Q8WXI4 607 aaPredicted RBP3.55□□□□□ -1.84
CSDE1-212ENST00000529046 LZICQ8WZA0 190 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 UPRTQ96BW1 309 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 RASD2Q96D21 266 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 PLEKHA8Q96JA3 519 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 NDEL1Q9GZM8 345 aa3.55□□□□□ -1.84
CSDE1-212ENST00000529046 NARFLQ9H6Q4 476 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms