RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 NPBWR2P48146 333 aa11.47□□□□□ -0.57
CAPN1-212ENST00000527887 POU3F4P49335 361 aa11.47□□□□□ -0.57
CAPN1-212ENST00000527887 GBX2P52951 348 aaPredicted RBP11.47□□□□□ -0.57
CAPN1-212ENST00000527887 NANOS3P60323 173 aaKnown RBP11.47□□□□□ -0.57
CAPN1-212ENST00000527887 DYNC1I2Q13409 638 aaKnown RBP11.47□□□□□ -0.57
CAPN1-212ENST00000527887 ALKBH1Q13686 389 aaKnown RBP11.47□□□□□ -0.57
CAPN1-212ENST00000527887 EDDM3AQ14507 147 aa11.47□□□□□ -0.57
CAPN1-212ENST00000527887 FAM189A2Q15884 450 aa11.47□□□□□ -0.57
CAPN1-212ENST00000527887 SSX1Q16384 188 aa11.47□□□□□ -0.57
CAPN1-212ENST00000527887 LINC00299Q6ZSB3 139 aa11.47□□□□□ -0.57
CAPN1-212ENST00000527887 RTN4RL2Q86UN3 420 aa11.47□□□□□ -0.57
CAPN1-212ENST00000527887 Q8N2B8 174 aa11.47□□□□□ -0.57
CAPN1-212ENST00000527887 MS4A15Q8N5U1 240 aa11.47□□□□□ -0.57
CAPN1-212ENST00000527887 ZNF676Q8N7Q3 588 aa11.47□□□□□ -0.57
CAPN1-212ENST00000527887 CHST4Q8NCG5 386 aa11.47□□□□□ -0.57
CAPN1-212ENST00000527887 OR52N4Q8NGI2 321 aa11.47□□□□□ -0.57
CAPN1-212ENST00000527887 OR13C3Q8NGS6 347 aa11.47□□□□□ -0.57
CAPN1-212ENST00000527887 CORO2AQ92828 525 aa11.47□□□□□ -0.57
CAPN1-212ENST00000527887 PELI1Q96FA3 418 aa11.47□□□□□ -0.57
CAPN1-212ENST00000527887 TMEM133Q9H2Q1 129 aa11.47□□□□□ -0.57
CAPN1-212ENST00000527887 GAL3ST2Q9H3Q3 398 aa11.47□□□□□ -0.57
CAPN1-212ENST00000527887 ZCCHC4Q9H5U6 513 aa11.47□□□□□ -0.57
CAPN1-212ENST00000527887 EXOSC4Q9NPD3 245 aaKnown RBP11.47□□□□□ -0.57
CAPN1-212ENST00000527887 RBFOX1Q9NWB1 397 aaKnown RBP11.47□□□□□ -0.57
CAPN1-212ENST00000527887 TAS2R3Q9NYW6 316 aa11.47□□□□□ -0.57
CAPN1-212ENST00000527887 A6NDX4 124 aa11.46□□□□□ -0.57
CAPN1-212ENST00000527887 TMEM212A6NML5 194 aa11.46□□□□□ -0.57
CAPN1-212ENST00000527887 AIREO43918 545 aa11.46□□□□□ -0.57
CAPN1-212ENST00000527887 PSPNO60542 156 aa11.46□□□□□ -0.57
CAPN1-212ENST00000527887 KDM4BO94953 1096 aa11.46□□□□□ -0.57
CAPN1-212ENST00000527887 TSPAN15O95858 294 aa11.46□□□□□ -0.57
CAPN1-212ENST00000527887 P2RX3P56373 397 aa11.46□□□□□ -0.57
CAPN1-212ENST00000527887 SSX2Q16385 188 aa11.46□□□□□ -0.57
CAPN1-212ENST00000527887 RPL22L1Q6P5R6 122 aaKnown RBP11.46□□□□□ -0.57
CAPN1-212ENST00000527887 TCF23Q7RTU1 214 aa11.46□□□□□ -0.57
CAPN1-212ENST00000527887 SERPINA12Q8IW75 414 aa11.46□□□□□ -0.57
CAPN1-212ENST00000527887 KLHDC1Q8N7A1 406 aa11.46□□□□□ -0.57
CAPN1-212ENST00000527887 OR5D14Q8NGL3 314 aa11.46□□□□□ -0.57
CAPN1-212ENST00000527887 CPNE2Q96FN4 548 aaPredicted RBP11.46□□□□□ -0.57
CAPN1-212ENST00000527887 C4orf36Q96KX1 117 aa11.46□□□□□ -0.57
CAPN1-212ENST00000527887 CLEC7AQ9BXN2 247 aa11.46□□□□□ -0.57
CAPN1-212ENST00000527887 PRSS22Q9GZN4 317 aa11.46□□□□□ -0.57
CAPN1-212ENST00000527887 COMMD4Q9H0A8 199 aa11.46□□□□□ -0.57
CAPN1-212ENST00000527887 STUB1Q9UNE7 303 aa11.46□□□□□ -0.57
CAPN1-212ENST00000527887 SSR3Q9UNL2 185 aa11.46□□□□□ -0.57
CAPN1-212ENST00000527887 TRGV10A0A0A0MS01 117 aa11.45□□□□□ -0.58
CAPN1-212ENST00000527887 IGHV2-26A0A0B4J1V2 119 aa11.45□□□□□ -0.58
CAPN1-212ENST00000527887 CHST1O43916 411 aa11.45□□□□□ -0.58
CAPN1-212ENST00000527887 ALDOBP05062 364 aa11.45□□□□□ -0.58
CAPN1-212ENST00000527887 CSN2P05814 226 aa11.45□□□□□ -0.58
CAPN1-212ENST00000527887 GADD45AP24522 165 aa11.45□□□□□ -0.58
CAPN1-212ENST00000527887 PAX6P26367 422 aa11.45□□□□□ -0.58
CAPN1-212ENST00000527887 HTR1DP28221 377 aa11.45□□□□□ -0.58
CAPN1-212ENST00000527887 DUSP1P28562 367 aa11.45□□□□□ -0.58
CAPN1-212ENST00000527887 OR3A1P47881 315 aa11.45□□□□□ -0.58
CAPN1-212ENST00000527887 DMKNQ6E0U4 476 aaPredicted RBP11.45□□□□□ -0.58
CAPN1-212ENST00000527887 TRAPPC6BQ86SZ2 158 aa11.45□□□□□ -0.58
CAPN1-212ENST00000527887 DYNAPQ8N1N2 210 aa11.45□□□□□ -0.58
CAPN1-212ENST00000527887 OR4S1Q8NGB4 309 aa11.45□□□□□ -0.58
CAPN1-212ENST00000527887 FAM110DQ8TAY7 271 aaPredicted RBP11.45□□□□□ -0.58
CAPN1-212ENST00000527887 ZNF596Q8TC21 504 aa11.45□□□□□ -0.58
CAPN1-212ENST00000527887 PHYHIPQ92561 330 aa11.45□□□□□ -0.58
CAPN1-212ENST00000527887 CREB3L1Q96BA8 519 aa11.45□□□□□ -0.58
CAPN1-212ENST00000527887 CHST6Q9GZX3 395 aa11.45□□□□□ -0.58
CAPN1-212ENST00000527887 ISG20L2Q9H9L3 353 aaKnown RBP11.45□□□□□ -0.58
CAPN1-212ENST00000527887 GSTK1Q9Y2Q3 226 aa11.45□□□□□ -0.58
CAPN1-212ENST00000527887 SIGLEC9Q9Y336 463 aa11.45□□□□□ -0.58
CAPN1-212ENST00000527887 TRDV1A0A1B0GX56 115 aa11.44□□□□□ -0.58
CAPN1-212ENST00000527887 MEGF11A6BM72 1044 aa11.44□□□□□ -0.58
CAPN1-212ENST00000527887 FAM90A22PA8MWA6 464 aa11.44□□□□□ -0.58
CAPN1-212ENST00000527887 F2RL2O00254 374 aa11.44□□□□□ -0.58
CAPN1-212ENST00000527887 OR2H2O95918 312 aa11.44□□□□□ -0.58
CAPN1-212ENST00000527887 OPN1MWP04001 364 aa11.44□□□□□ -0.58
CAPN1-212ENST00000527887 OPN1MW2P0DN77 364 aa11.44□□□□□ -0.58
CAPN1-212ENST00000527887 OPN1MW3P0DN78 364 aa11.44□□□□□ -0.58
CAPN1-212ENST00000527887 CELP19835 753 aa11.44□□□□□ -0.58
CAPN1-212ENST00000527887 ARHGDIBP52566 201 aa11.44□□□□□ -0.58
CAPN1-212ENST00000527887 LIPKQ5VXJ0 399 aa11.44□□□□□ -0.58
CAPN1-212ENST00000527887 CCBE1Q6UXH8 406 aaPredicted RBP11.44□□□□□ -0.58
CAPN1-212ENST00000527887 HEPN1Q6WQI6 88 aa11.44□□□□□ -0.58
CAPN1-212ENST00000527887 C16orf82Q7Z2V1 217 aa11.44□□□□□ -0.58
CAPN1-212ENST00000527887 PARP16Q8N5Y8 322 aa11.44□□□□□ -0.58
CAPN1-212ENST00000527887 OR51A4Q8NGJ6 313 aa11.44□□□□□ -0.58
CAPN1-212ENST00000527887 OR13C9Q8NGT0 318 aa11.44□□□□□ -0.58
CAPN1-212ENST00000527887 NDNFQ8TB73 568 aa11.44□□□□□ -0.58
CAPN1-212ENST00000527887 THRSPQ92748 146 aa11.44□□□□□ -0.58
CAPN1-212ENST00000527887 AKR1E2Q96JD6 320 aa11.44□□□□□ -0.58
CAPN1-212ENST00000527887 NKX3-1Q99801 234 aaPredicted RBP11.44□□□□□ -0.58
CAPN1-212ENST00000527887 NAA50Q9GZZ1 169 aaKnown RBP11.44□□□□□ -0.58
CAPN1-212ENST00000527887 ZNF702PQ9H963 129 aa11.44□□□□□ -0.58
CAPN1-212ENST00000527887 DPM3Q9P2X0 92 aa11.44□□□□□ -0.58
CAPN1-212ENST00000527887 IL36RNQ9UBH0 155 aa11.44□□□□□ -0.58
CAPN1-212ENST00000527887 FOXJ3Q9UPW0 622 aa11.44□□□□□ -0.58
CAPN1-212ENST00000527887 A3GALT2U3KPV4 340 aa11.44□□□□□ -0.58
CAPN1-212ENST00000527887 IGKV1-12A0A0C4DH73 117 aa11.43□□□□□ -0.58
CAPN1-212ENST00000527887 A0A0G2JK05 382 aa11.43□□□□□ -0.58
CAPN1-212ENST00000527887 MAGEB3O15480 346 aa11.43□□□□□ -0.58
CAPN1-212ENST00000527887 SULT1B1O43704 296 aa11.43□□□□□ -0.58
CAPN1-212ENST00000527887 LALBAP00709 142 aa11.43□□□□□ -0.58
CAPN1-212ENST00000527887 IGKV1D-12P01611 117 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms