RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 PPIAL4AQ9Y536 164 aa13.03□□□□□ -0.32
USP47-207ENST00000527733 HLA-DQB1P01920 261 aa13.03□□□□□ -0.32
USP47-207ENST00000527733 KLK2P20151 261 aa13.03□□□□□ -0.32
USP47-207ENST00000527733 PRDX2P32119 198 aa13.03□□□□□ -0.32
USP47-207ENST00000527733 LYPD8Q6UX82 237 aa13.03□□□□□ -0.32
USP47-207ENST00000527733 MRGPRGQ86SM5 289 aa13.03□□□□□ -0.32
USP47-207ENST00000527733 OR2G3Q8NGZ4 309 aa13.03□□□□□ -0.32
USP47-207ENST00000527733 CA10Q9NS85 328 aa13.03□□□□□ -0.32
USP47-207ENST00000527733 FOXD3Q9UJU5 478 aaPredicted RBP13.03□□□□□ -0.32
USP47-207ENST00000527733 PCNTO95613 3336 aa13.03□□□□□ -0.32
USP47-207ENST00000527733 FANCMQ8IYD8 2048 aa13.03□□□□□ -0.32
USP47-207ENST00000527733 HELZP42694 1942 aaKnown RBP13.02□□□□□ -0.32
USP47-207ENST00000527733 B8ZZF3 427 aa13.02□□□□□ -0.32
USP47-207ENST00000527733 PPYP01298 95 aa13.02□□□□□ -0.32
USP47-207ENST00000527733 LPAR6P43657 344 aa13.02□□□□□ -0.32
USP47-207ENST00000527733 RAB13P51153 203 aa13.02□□□□□ -0.32
USP47-207ENST00000527733 HLA-DRB3P79483 266 aa13.02□□□□□ -0.32
USP47-207ENST00000527733 C9orf106Q8NAJ2 232 aa13.02□□□□□ -0.32
USP47-207ENST00000527733 ERGIC1Q969X5 290 aa13.02□□□□□ -0.32
USP47-207ENST00000527733 PSENENQ9NZ42 101 aa13.02□□□□□ -0.32
USP47-207ENST00000527733 ZNF716A6NP11 495 aa13.02□□□□□ -0.33
USP47-207ENST00000527733 OR4A8P0C604 315 aa13.02□□□□□ -0.33
USP47-207ENST00000527733 PTGDSP41222 190 aa13.02□□□□□ -0.33
USP47-207ENST00000527733 UBE2V2Q15819 145 aa13.02□□□□□ -0.33
USP47-207ENST00000527733 RBMS3Q6XE24 437 aaKnown RBP13.02□□□□□ -0.33
USP47-207ENST00000527733 SLC7A5P1Q8MH63 180 aa13.02□□□□□ -0.33
USP47-207ENST00000527733 NANPQ8TBE9 248 aa13.02□□□□□ -0.33
USP47-207ENST00000527733 ITLN1Q8WWA0 313 aa13.02□□□□□ -0.33
USP47-207ENST00000527733 GNPNAT1Q96EK6 184 aaPredicted RBP13.02□□□□□ -0.33
USP47-207ENST00000527733 GSX2Q9BZM3 304 aa13.02□□□□□ -0.33
USP47-207ENST00000527733 ZDHHC8Q9ULC8 765 aa13.02□□□□□ -0.33
USP47-207ENST00000527733 LGALS8O00214 317 aa13.02□□□□□ -0.33
USP47-207ENST00000527733 SYNGR3O43761 229 aa13.02□□□□□ -0.33
USP47-207ENST00000527733 PCNPQ8WW12 178 aaKnown RBP13.02□□□□□ -0.33
USP47-207ENST00000527733 BCL2L2Q92843 193 aaPredicted RBP13.02□□□□□ -0.33
USP47-207ENST00000527733 RNF115Q9Y4L5 304 aa13.02□□□□□ -0.33
USP47-207ENST00000527733 LANCL1O43813 399 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 SCAF4O95104 1147 aaKnown RBP13.01□□□□□ -0.33
USP47-207ENST00000527733 COX7A1P24310 79 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 KIF26BQ2KJY2 2108 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 FABP1P07148 127 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 OR5AC1P0C628 307 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 FAM27E3Q08E93 113 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 CLEC18AA5D8T8 446 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 IGHV3-13P01766 116 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 IGHV3-7P01780 117 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 ADRA2AP08913 450 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 MRPS11P82912 194 aaKnown RBP13.01□□□□□ -0.33
USP47-207ENST00000527733 NAAAQ02083 359 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 CLEC18CQ8NCF0 446 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 OR4A4PQ8NGN8 299 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 SLC25A38Q96DW6 304 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 ADTRPQ96IZ2 230 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 RNF122Q9H9V4 155 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 IGHV3OR15-7A0A075B7D8 119 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 TRAV39A0A0B4J263 110 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 FAM90A10PA6NDY2 464 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 FAM90A18PA6NE21 464 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 FAM90A16PA6NEW6 464 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 FAM90A20PA6NIJ5 464 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 FAM90A8PA6NJQ4 464 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 FAM90A7PA6NKC0 464 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 FAM90A22PA8MWA6 464 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 FAM90A12PA8MX19 464 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 FAM90A5PA8MXJ8 464 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 FAM90A23PA8MXZ1 464 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 FAM90A15PP0C7V4 464 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 FAM90A13PP0C7W8 464 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 FAM90A14PP0C7W9 464 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 FAM90A24PP0C7X0 464 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 CST9LP1Q5W188 147 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 Q6ZRG5 221 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 CORO2AQ92828 525 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 RASL12Q9NYN1 266 aa13.01□□□□□ -0.33
USP47-207ENST00000527733 SYNGR1O43759 233 aa13□□□□□ -0.33
USP47-207ENST00000527733 CEACAM3P40198 252 aa13□□□□□ -0.33
USP47-207ENST00000527733 GAS1P54826 345 aa13□□□□□ -0.33
USP47-207ENST00000527733 AESQ08117 197 aa13□□□□□ -0.33
USP47-207ENST00000527733 MPPED2Q15777 294 aa13□□□□□ -0.33
USP47-207ENST00000527733 STUMQ69YW2 141 aa13□□□□□ -0.33
USP47-207ENST00000527733 DYRK2Q92630 601 aa13□□□□□ -0.33
USP47-207ENST00000527733 NEURL2Q9BR09 285 aa13□□□□□ -0.33
USP47-207ENST00000527733 HDHD3Q9BSH5 251 aaPredicted RBP13□□□□□ -0.33
USP47-207ENST00000527733 CLN8Q9UBY8 286 aa13□□□□□ -0.33
USP47-207ENST00000527733 KCNK7Q9Y2U2 307 aa13□□□□□ -0.33
USP47-207ENST00000527733 C11orf87Q6NUJ2 197 aa13□□□□□ -0.33
USP47-207ENST00000527733 POM121L2Q96KW2 1035 aa13□□□□□ -0.33
USP47-207ENST00000527733 KLHDC3Q9BQ90 382 aa13□□□□□ -0.33
USP47-207ENST00000527733 CTNNBIP1Q9NSA3 81 aaPredicted RBP13□□□□□ -0.33
USP47-207ENST00000527733 IL19Q9UHD0 177 aa13□□□□□ -0.33
USP47-207ENST00000527733 C2orf16Q68DN1 1984 aa13□□□□□ -0.33
USP47-207ENST00000527733 MGST3O14880 152 aa13□□□□□ -0.33
USP47-207ENST00000527733 ADH4P08319 380 aa13□□□□□ -0.33
USP47-207ENST00000527733 CD80P33681 288 aa13□□□□□ -0.33
USP47-207ENST00000527733 PHYHD1Q5SRE7 291 aa13□□□□□ -0.33
USP47-207ENST00000527733 ZNF826PQ6ZT77 177 aa13□□□□□ -0.33
USP47-207ENST00000527733 AMMECR1Q9Y4X0 333 aaPredicted RBP13□□□□□ -0.33
USP47-207ENST00000527733 H3BP45 60 aa13□□□□□ -0.33
USP47-207ENST00000527733 CT45A6P0DMU7 189 aa13□□□□□ -0.33
USP47-207ENST00000527733 CT45A5P0DMU8 189 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms