RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 TNFRSF13BO14836 293 aaPredicted RBP3.56□□□□□ -1.84
CD44-213ENST00000525209 HCRTR1O43613 425 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 NPIPB7O75200 414 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 REM1O75628 298 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 SULT1C4O75897 302 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 NXPH4O95158 308 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 MMP7P09237 267 aaPredicted RBP3.56□□□□□ -1.84
CD44-213ENST00000525209 OR5G3P0C626 314 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 GKN3PP0CG01 181 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 SULT1A3P0DMM9 295 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 SULT1A4P0DMN0 295 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 CD79AP11912 226 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 GABRA1P14867 456 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 ZNF708P17019 499 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 TCN2P20062 427 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 TNFRSF1BP20333 461 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 MYL9P24844 172 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 S100PP25815 95 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 MIPP30301 263 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 AKR1C3P42330 323 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 ZNF133P52736 654 aaPredicted RBP3.56□□□□□ -1.84
CD44-213ENST00000525209 RIPPLY3P57055 190 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 RHOBP62745 196 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 SLC35A2P78381 396 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 EMX1Q04741 257 aaPredicted RBP3.56□□□□□ -1.84
CD44-213ENST00000525209 SHHQ15465 462 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 TMEM128Q5BJH2 165 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 TTC32Q5I0X7 151 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 CLEC12AQ5QGZ9 265 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 AVPI1Q5T686 147 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 C10orf25Q5T742 122 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 N4BP2L1Q5TBK1 243 aaPredicted RBP3.56□□□□□ -1.84
CD44-213ENST00000525209 ELP2Q6IA86 826 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 OPN5Q6U736 354 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 TOMM20LQ6UXN7 152 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 C4orf22Q6V702 233 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 SLC16A13Q7RTY0 426 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 ZNF571Q7Z3V5 609 aaPredicted RBP3.56□□□□□ -1.84
CD44-213ENST00000525209 PIP4P1Q86T03 277 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 ZBTB8OSQ8IWT0 167 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 C9orf40Q8IXQ3 194 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 UBALD2Q8IYN6 164 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 C6orf223Q8N319 242 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 ZNF614Q8N883 585 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 OR10G7Q8NGN6 311 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 RXFP2Q8WXD0 754 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 PLEKHF1Q96S99 279 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 MARVELD1Q9BSK0 173 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 MROQ9BYG7 248 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 OR51E2Q9H255 320 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 IL25Q9H293 177 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 ZSCAN16Q9H4T2 348 aaPredicted RBP3.56□□□□□ -1.84
CD44-213ENST00000525209 ISG20L2Q9H9L3 353 aaKnown RBP3.56□□□□□ -1.84
CD44-213ENST00000525209 SIX2Q9NPC8 291 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 RASL12Q9NYN1 266 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 TAAR2Q9P1P5 351 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 SHPKQ9UHJ6 478 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 ZNF223Q9UK11 482 aaPredicted RBP3.56□□□□□ -1.84
CD44-213ENST00000525209 RARRES3Q9UL19 164 aa3.56□□□□□ -1.84
CD44-213ENST00000525209 TONSLQ96HA7 1378 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 TRAV39A0A0B4J263 110 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 A0A1W2PS18 150 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 C12orf77C9JDV5 145 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 EDIL3O43854 480 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 ORC5O43913 435 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 C1QL1O75973 258 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 ALPLP05186 524 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 EIF4EP06730 217 aaKnown RBP3.55□□□□□ -1.84
CD44-213ENST00000525209 COX4I1P13073 169 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 CD34P28906 385 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 CA5AP35218 305 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 RCVRNP35243 200 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 CTRLP40313 264 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 KLK7P49862 253 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 SELENOPP49908 381 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 HBG1P69891 147 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 HBG2P69892 147 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 RUNX1Q01196 453 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 C14orf28Q4W4Y0 310 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 TMEM255AQ5JRV8 349 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 ZNF684Q5T5D7 378 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 RUSC1-AS1Q66K80 236 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 STEAP4Q687X5 459 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 UFSP1Q6NVU6 142 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 PAMR1Q6UXH9 720 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 NEGR1Q7Z3B1 354 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 PTAR1Q7Z6K3 402 aaPredicted RBP3.55□□□□□ -1.84
CD44-213ENST00000525209 CALHM3Q86XJ0 350 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 SLC35F6Q8N357 371 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 MUC15Q8N387 334 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 ZNF439Q8NDP4 499 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 ST6GALNAC3Q8NDV1 305 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 OR2A12Q8NGT7 310 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 MFSD8Q8NHS3 518 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 FLVCR1-AS1Q8TAF5 88 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 TMED6Q8WW62 240 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 IL22RA2Q969J5 263 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 EXOSC8Q96B26 276 aaKnown RBP3.55□□□□□ -1.84
CD44-213ENST00000525209 SEH1LQ96EE3 360 aa3.55□□□□□ -1.84
CD44-213ENST00000525209 DCUN1D1Q96GG9 259 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms