RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 OR10A7Q8NGE5 316 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 OR2T10Q8NGZ9 312 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 LILRB1Q8NHL6 650 aaPredicted RBP14.23□□□□□ -0.13
USP42-207ENST00000521713 RPEQ96AT9 228 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 TMEM38BQ9NVV0 291 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 OR6C3Q9NZP0 311 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 MASP2O00187 686 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 CLEC3BP05452 202 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 IL24Q13007 206 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 ATP6V1FQ16864 119 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 RAB24Q969Q5 203 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 ALX4Q9H161 411 aaPredicted RBP14.23□□□□□ -0.13
USP42-207ENST00000521713 NAT8BQ9UHF3 227 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 M0QZ24 198 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 OGG1O15527 345 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 ACAA2P42765 397 aaKnown RBP14.23□□□□□ -0.13
USP42-207ENST00000521713 IFITM3Q01628 133 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 KLF9Q13886 244 aaPredicted RBP14.23□□□□□ -0.13
USP42-207ENST00000521713 PLAC9Q5JTB6 97 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 OR8B12Q8NGG6 310 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 OR2H1Q9GZK4 316 aa14.23□□□□□ -0.13
USP42-207ENST00000521713 MRM2Q9UI43 246 aaKnown RBP14.23□□□□□ -0.13
USP42-207ENST00000521713 PMP22Q01453 160 aa14.22□□□□□ -0.13
USP42-207ENST00000521713 SEZ6L2Q6UXD5 910 aa14.22□□□□□ -0.13
USP42-207ENST00000521713 NAA60Q9H7X0 242 aa14.22□□□□□ -0.13
USP42-207ENST00000521713 SIPA1L1O43166 1804 aa14.22□□□□□ -0.13
USP42-207ENST00000521713 M0R1X1 148 aa14.22□□□□□ -0.13
USP42-207ENST00000521713 ADAM20O43506 726 aa14.22□□□□□ -0.13
USP42-207ENST00000521713 CEACAM3P40198 252 aa14.22□□□□□ -0.13
USP42-207ENST00000521713 P2RY6Q15077 328 aa14.22□□□□□ -0.13
USP42-207ENST00000521713 TUSC1Q2TAM9 212 aa14.22□□□□□ -0.13
USP42-207ENST00000521713 BTNL3Q6UXE8 466 aa14.22□□□□□ -0.13
USP42-207ENST00000521713 ADGRG7Q96K78 797 aa14.22□□□□□ -0.13
USP42-207ENST00000521713 RSRP1Q9BUV0 290 aa14.22□□□□□ -0.13
USP42-207ENST00000521713 MANBALQ9NQG1 85 aa14.22□□□□□ -0.13
USP42-207ENST00000521713 A0A0J9YW62 118 aa14.22□□□□□ -0.13
USP42-207ENST00000521713 HRASP01112 189 aa14.22□□□□□ -0.13
USP42-207ENST00000521713 ZNF25P17030 456 aaPredicted RBP14.22□□□□□ -0.13
USP42-207ENST00000521713 BSXQ3C1V8 233 aa14.22□□□□□ -0.13
USP42-207ENST00000521713 TMEM65Q6PI78 240 aa14.22□□□□□ -0.13
USP42-207ENST00000521713 FA2HQ7L5A8 372 aa14.22□□□□□ -0.13
USP42-207ENST00000521713 NDFIP1Q9BT67 221 aa14.22□□□□□ -0.13
USP42-207ENST00000521713 SVILO95425 2214 aa14.22□□□□□ -0.13
USP42-207ENST00000521713 CIDEAO60543 219 aa14.22□□□□□ -0.13
USP42-207ENST00000521713 TMEM33P57088 247 aa14.22□□□□□ -0.13
USP42-207ENST00000521713 ZP4Q12836 540 aa14.22□□□□□ -0.13
USP42-207ENST00000521713 GSX1Q9H4S2 264 aaPredicted RBP14.22□□□□□ -0.13
USP42-207ENST00000521713 PRRX1P54821 245 aa14.21□□□□□ -0.13
USP42-207ENST00000521713 OR5C1Q8NGR4 320 aa14.21□□□□□ -0.13
USP42-207ENST00000521713 AQP7O14520 342 aa14.21□□□□□ -0.13
USP42-207ENST00000521713 SMIM10L1P0DMW3 83 aa14.21□□□□□ -0.13
USP42-207ENST00000521713 NEIL1Q96FI4 390 aaPredicted RBP14.21□□□□□ -0.13
USP42-207ENST00000521713 SMIM10Q96HG1 83 aa14.21□□□□□ -0.13
USP42-207ENST00000521713 AMMECR1Q9Y4X0 333 aaPredicted RBP14.21□□□□□ -0.13
USP42-207ENST00000521713 MRPS18BQ9Y676 258 aaKnown RBP14.21□□□□□ -0.13
USP42-207ENST00000521713 UBE2L5PA0A1B0GUS4 154 aa14.21□□□□□ -0.13
USP42-207ENST00000521713 CRYM-AS1A6NIL9 109 aa14.21□□□□□ -0.13
USP42-207ENST00000521713 FAM74A7A6NL05 159 aa14.21□□□□□ -0.13
USP42-207ENST00000521713 SLC31A2O15432 143 aa14.21□□□□□ -0.13
USP42-207ENST00000521713 CEACAM1P13688 526 aa14.21□□□□□ -0.13
USP42-207ENST00000521713 TGIF1Q15583 401 aa14.21□□□□□ -0.13
USP42-207ENST00000521713 LINC00518Q8N0U6 118 aa14.21□□□□□ -0.13
USP42-207ENST00000521713 ARHGAP5-AS1Q96IT6 56 aa14.21□□□□□ -0.13
USP42-207ENST00000521713 OR51M1Q9H341 326 aa14.21□□□□□ -0.13
USP42-207ENST00000521713 SAP30LQ9HAJ7 183 aa14.21□□□□□ -0.13
USP42-207ENST00000521713 RNF24Q9Y225 148 aa14.21□□□□□ -0.13
USP42-207ENST00000521713 KRASP01116 189 aa14.21□□□□□ -0.14
USP42-207ENST00000521713 NSUN5P2Q63ZY6 315 aa14.21□□□□□ -0.14
USP42-207ENST00000521713 VWCEQ96DN2 955 aa14.21□□□□□ -0.14
USP42-207ENST00000521713 POM121L2Q96KW2 1035 aa14.21□□□□□ -0.14
USP42-207ENST00000521713 FKBP11Q9NYL4 201 aa14.21□□□□□ -0.14
USP42-207ENST00000521713 LOC102723971A0A1B0GUV8 181 aa14.2□□□□□ -0.14
USP42-207ENST00000521713 FCN1O00602 326 aa14.2□□□□□ -0.14
USP42-207ENST00000521713 HYAL3O43820 417 aaPredicted RBP14.2□□□□□ -0.14
USP42-207ENST00000521713 ZNF737O75373 536 aa14.2□□□□□ -0.14
USP42-207ENST00000521713 IGKV1D-16P01601 117 aa14.2□□□□□ -0.14
USP42-207ENST00000521713 CTSDP07339 412 aaPredicted RBP14.2□□□□□ -0.14
USP42-207ENST00000521713 Q6ZN92 141 aa14.2□□□□□ -0.14
USP42-207ENST00000521713 FAM214BQ7L5A3 538 aa14.2□□□□□ -0.14
USP42-207ENST00000521713 SLC25A42Q86VD7 318 aa14.2□□□□□ -0.14
USP42-207ENST00000521713 DNAJC13O75165 2243 aa14.2□□□□□ -0.14
USP42-207ENST00000521713 OR5H1A6NKK0 313 aa14.2□□□□□ -0.14
USP42-207ENST00000521713 PRR33A8MZF0 331 aa14.2□□□□□ -0.14
USP42-207ENST00000521713 FOXL2P58012 376 aa14.2□□□□□ -0.14
USP42-207ENST00000521713 C3orf80F5H4A9 247 aa14.2□□□□□ -0.14
USP42-207ENST00000521713 HOXA6P31267 233 aa14.2□□□□□ -0.14
USP42-207ENST00000521713 FAM209BQ5JX69 171 aa14.2□□□□□ -0.14
USP42-207ENST00000521713 OR10C1Q96KK4 312 aa14.2□□□□□ -0.14
USP42-207ENST00000521713 GINS3Q9BRX5 216 aa14.2□□□□□ -0.14
USP42-207ENST00000521713 MRPS18AQ9NVS2 196 aaKnown RBP14.2□□□□□ -0.14
USP42-207ENST00000521713 CELA2AP08217 269 aa14.2□□□□□ -0.14
USP42-207ENST00000521713 STUMQ69YW2 141 aa14.2□□□□□ -0.14
USP42-207ENST00000521713 BRCA1P38398 1863 aaKnown RBP14.19□□□□□ -0.14
USP42-207ENST00000521713 K7ERU9 68 aa14.19□□□□□ -0.14
USP42-207ENST00000521713 SEC11BP0C7V7 166 aa14.19□□□□□ -0.14
USP42-207ENST00000521713 SPCS3P61009 180 aa14.19□□□□□ -0.14
USP42-207ENST00000521713 RNF133Q8WVZ7 376 aa14.19□□□□□ -0.14
USP42-207ENST00000521713 A0A1W2PNV4 684 aa14.19□□□□□ -0.14
USP42-207ENST00000521713 HPXP02790 462 aa14.19□□□□□ -0.14
USP42-207ENST00000521713 GZMMP51124 257 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms