RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 DECR2Q9NUI1 292 aa12.68□□□□□ -0.38
TRAPPC9-205ENST00000518839 PPP1R3CQ9UQK1 317 aa12.68□□□□□ -0.38
TRAPPC9-205ENST00000518839 HIVEP3Q5T1R4 2406 aa12.68□□□□□ -0.38
TRAPPC9-205ENST00000518839 DYSFO75923 2080 aa12.68□□□□□ -0.38
TRAPPC9-205ENST00000518839 IGKV1D-8A0A087WSZ0 117 aa12.67□□□□□ -0.38
TRAPPC9-205ENST00000518839 RFPL4AA6NLU0 287 aa12.67□□□□□ -0.38
TRAPPC9-205ENST00000518839 OR2AT4A6NND4 320 aa12.67□□□□□ -0.38
TRAPPC9-205ENST00000518839 TRDCB7Z8K6 153 aa12.67□□□□□ -0.38
TRAPPC9-205ENST00000518839 RFPL4AL1F8VTS6 287 aa12.67□□□□□ -0.38
TRAPPC9-205ENST00000518839 SDCBPO00560 298 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC9-205ENST00000518839 SSNA1O43805 119 aa12.67□□□□□ -0.38
TRAPPC9-205ENST00000518839 LOXP28300 417 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC9-205ENST00000518839 SNRPD2P62316 118 aaKnown RBP12.67□□□□□ -0.38
TRAPPC9-205ENST00000518839 ZNF626Q68DY1 528 aa12.67□□□□□ -0.38
TRAPPC9-205ENST00000518839 SLC35E4Q6ICL7 350 aa12.67□□□□□ -0.38
TRAPPC9-205ENST00000518839 DHRS11Q6UWP2 260 aa12.67□□□□□ -0.38
TRAPPC9-205ENST00000518839 ZNF497Q6ZNH5 498 aa12.67□□□□□ -0.38
TRAPPC9-205ENST00000518839 C1orf87Q8N0U7 546 aa12.67□□□□□ -0.38
TRAPPC9-205ENST00000518839 BEX2Q9BXY8 128 aa12.67□□□□□ -0.38
TRAPPC9-205ENST00000518839 SAP30LQ9HAJ7 183 aa12.67□□□□□ -0.38
TRAPPC9-205ENST00000518839 BEX1Q9HBH7 125 aa12.67□□□□□ -0.38
TRAPPC9-205ENST00000518839 ING3Q9NXR8 418 aa12.67□□□□□ -0.38
TRAPPC9-205ENST00000518839 TANC2Q9HCD6 1990 aa12.67□□□□□ -0.38
TRAPPC9-205ENST00000518839 CACNA1BQ00975 2339 aa12.66□□□□□ -0.38
TRAPPC9-205ENST00000518839 TMEM30CPA0ZSE6 113 aa12.66□□□□□ -0.38
TRAPPC9-205ENST00000518839 FABP7O15540 132 aa12.66□□□□□ -0.38
TRAPPC9-205ENST00000518839 SIAH2O43255 324 aa12.66□□□□□ -0.38
TRAPPC9-205ENST00000518839 PSG2P11465 335 aa12.66□□□□□ -0.38
TRAPPC9-205ENST00000518839 EGR1P18146 543 aa12.66□□□□□ -0.38
TRAPPC9-205ENST00000518839 PRDX2P32119 198 aa12.66□□□□□ -0.38
TRAPPC9-205ENST00000518839 HLA-DRB3P79483 266 aa12.66□□□□□ -0.38
TRAPPC9-205ENST00000518839 PAX5Q02548 391 aa12.66□□□□□ -0.38
TRAPPC9-205ENST00000518839 TMED4Q7Z7H5 227 aa12.66□□□□□ -0.38
TRAPPC9-205ENST00000518839 PEG10Q86TG7 708 aaKnown RBP12.66□□□□□ -0.38
TRAPPC9-205ENST00000518839 SLC25A42Q86VD7 318 aa12.66□□□□□ -0.38
TRAPPC9-205ENST00000518839 MUC15Q8N387 334 aa12.66□□□□□ -0.38
TRAPPC9-205ENST00000518839 OR4A4PQ8NGN8 299 aa12.66□□□□□ -0.38
TRAPPC9-205ENST00000518839 NEUROG1Q92886 237 aa12.66□□□□□ -0.38
TRAPPC9-205ENST00000518839 ZNF2Q9BSG1 426 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC9-205ENST00000518839 ZNF221Q9UK13 617 aa12.66□□□□□ -0.38
TRAPPC9-205ENST00000518839 GPR132Q9UNW8 380 aa12.66□□□□□ -0.38
TRAPPC9-205ENST00000518839 VSIG4Q9Y279 399 aa12.66□□□□□ -0.38
TRAPPC9-205ENST00000518839 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 GOSR1O95249 250 aa12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 DIRAS3O95661 229 aa12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 PLAUP00749 431 aa12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 OR4E1P0C645 316 aa12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 GSTT2P0CG29 244 aa12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 VSIG10L2P0DP72 767 aa12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 MUC1P15941 1255 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 SEC61A1P61619 476 aaKnown RBP12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 COL10A1Q03692 680 aa12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 SWI5Q1ZZU3 235 aa12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 MST1LQ2TV78 715 aa12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 C4orf46Q504U0 113 aa12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 SPRNQ5BIV9 151 aa12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 AADACL3Q5VUY0 350 aa12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 TRAT1Q6PIZ9 186 aa12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 BOLLQ8N9W6 283 aaKnown RBP12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 TMEM185AQ8NFB2 350 aa12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 LILRB1Q8NHL6 650 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 PLPPR1Q8TBJ4 325 aa12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 ZFAND1Q8TCF1 268 aa12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 MARCH1Q8TCQ1 289 aa12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 ZNF431Q8TF32 576 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 MRGPRFQ96AM1 343 aa12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 SNX22Q96L94 193 aa12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 SEC22CQ9BRL7 303 aa12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 ZNF69Q9UC07 566 aa12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 TRAPPC2LQ9UL33 140 aa12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 PCDHB10Q9UN67 800 aa12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 C14orf166Q9Y224 244 aaKnown RBP12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 NBASA2RRP1 2371 aa12.65□□□□□ -0.38
TRAPPC9-205ENST00000518839 ICE1Q9Y2F5 2266 aa12.64□□□□□ -0.39
TRAPPC9-205ENST00000518839 C3orf80F5H4A9 247 aa12.64□□□□□ -0.39
TRAPPC9-205ENST00000518839 HPXP02790 462 aa12.64□□□□□ -0.39
TRAPPC9-205ENST00000518839 TK1P04183 234 aa12.64□□□□□ -0.39
TRAPPC9-205ENST00000518839 CEBPDP49716 269 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC9-205ENST00000518839 PPOXP50336 477 aa12.64□□□□□ -0.39
TRAPPC9-205ENST00000518839 NPY4RP50391 375 aa12.64□□□□□ -0.39
TRAPPC9-205ENST00000518839 UCP3P55916 312 aa12.64□□□□□ -0.39
TRAPPC9-205ENST00000518839 HERV-K104P61576 105 aa12.64□□□□□ -0.39
TRAPPC9-205ENST00000518839 CCL8P80075 99 aa12.64□□□□□ -0.39
TRAPPC9-205ENST00000518839 ATXN7L3Q14CW9 347 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC9-205ENST00000518839 TEX36Q5VZQ5 186 aa12.64□□□□□ -0.39
TRAPPC9-205ENST00000518839 ZNF660Q6AZW8 331 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC9-205ENST00000518839 C11orf88Q6PI97 169 aa12.64□□□□□ -0.39
TRAPPC9-205ENST00000518839 Q6ZPA2 131 aa12.64□□□□□ -0.39
TRAPPC9-205ENST00000518839 MBNL3Q9NUK0 354 aaKnown RBP12.64□□□□□ -0.39
TRAPPC9-205ENST00000518839 KCNIP1Q9NZI2 227 aa12.64□□□□□ -0.39
TRAPPC9-205ENST00000518839 ITPR1Q14643 2758 aa12.64□□□□□ -0.39
TRAPPC9-205ENST00000518839 IGKV1D-17A0A075B6S4 117 aa12.63□□□□□ -0.39
TRAPPC9-205ENST00000518839 OOEPA6NGQ2 149 aa12.63□□□□□ -0.39
TRAPPC9-205ENST00000518839 OR5H14A6NHG9 310 aa12.63□□□□□ -0.39
TRAPPC9-205ENST00000518839 MGST3O14880 152 aa12.63□□□□□ -0.39
TRAPPC9-205ENST00000518839 PSPNO60542 156 aa12.63□□□□□ -0.39
TRAPPC9-205ENST00000518839 CTSDP07339 412 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC9-205ENST00000518839 SULT1A3P0DMM9 295 aa12.63□□□□□ -0.39
TRAPPC9-205ENST00000518839 SULT1A4P0DMN0 295 aa12.63□□□□□ -0.39
TRAPPC9-205ENST00000518839 PGAM2P15259 253 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms