RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 BLIDQ8IZY5 108 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 Q8N9L7 120 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 ZNF439Q8NDP4 499 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 OR10G3Q8NGC4 313 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 OR4K17Q8NGC6 315 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 OR52E4Q8NGH9 312 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 OR1S2Q8NGQ3 325 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 OR2G2Q8NGZ5 317 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 OR13C6PQ8NH95 151 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 GRPEL2Q8TAA5 225 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 DNAJC9Q8WXX5 260 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 HAUS1Q96CS2 278 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 ADTRPQ96IZ2 230 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 KCNA7Q96RP8 456 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 DOK1Q99704 481 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 FOXC2Q99958 501 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 SEC22CQ9BRL7 303 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 C2orf88Q9BSF0 95 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 MND1Q9BWT6 205 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 CDCA4Q9BXL8 241 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 TMEM59Q9BXS4 323 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 PECRQ9BY49 303 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 UGT2B28Q9BY64 529 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 SLC25A39Q9BZJ4 359 aaPredicted RBP2.38□□□□□ -2.03
VPS13B-207ENST00000518569 SLC19A3Q9BZV2 496 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 OR11A1Q9GZK7 315 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 C20orf85Q9H1P6 137 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 MAP1LC3AQ9H492 121 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 UBE2ZQ9H832 354 aaPredicted RBP2.38□□□□□ -2.03
VPS13B-207ENST00000518569 UGT1A8Q9HAW9 530 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 ACOT13Q9NPJ3 140 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 SLC25A37Q9NYZ2 338 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 KIAA1107Q9UPP5 1409 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 RIMS2Q9UQ26 1411 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 TP53TG5Q9Y2B4 290 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 SLC22A7Q9Y694 548 aa2.38□□□□□ -2.03
VPS13B-207ENST00000518569 RPRD2Q5VT52 1461 aaKnown RBP2.38□□□□□ -2.03
VPS13B-207ENST00000518569 E9PCH4 1651 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 KIF1AQ12756 1690 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 SLIT2O94813 1529 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 LMTK2Q8IWU2 1503 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 PKD1L3Q7Z443 1732 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 FMN2Q9NZ56 1722 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 PARP4Q9UKK3 1724 aaKnown RBP2.37□□□□□ -2.03
VPS13B-207ENST00000518569 CRYBG1Q9Y4K1 1723 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 TDRD6O60522 2096 aaKnown RBP2.37□□□□□ -2.03
VPS13B-207ENST00000518569 SMG6Q86US8 1419 aaKnown RBP2.37□□□□□ -2.03
VPS13B-207ENST00000518569 RGPD5Q99666 1765 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 IGKV1D-8A0A087WSZ0 117 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 SMIM9A6NGZ8 99 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 ARL5CA6NH57 179 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 FAM166BA8MTA8 275 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 F5H5K5 113 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 F5H5T6 163 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 J3QLI3 93 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 HSD17B6O14756 317 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 ARPC5O15511 151 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 TRAF3IP2O43734 574 aaPredicted RBP2.37□□□□□ -2.03
VPS13B-207ENST00000518569 PDE6DO43924 150 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 MGRN1O60291 552 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 FAM189A1O60320 539 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 BANF1O75531 89 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 RP2O75695 350 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 EIF3GO75821 320 aaKnown RBP eCLIP2.37□□□□□ -2.03
VPS13B-207ENST00000518569 SLC22A5O76082 557 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 ATG12O94817 140 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 S1PR2O95136 353 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 HAND1O96004 215 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 IFNA10P01566 189 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 S100A8P05109 93 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 OR5AL1P0C617 328 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 RBMY1CP0DJD4 496 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 PSG2P11465 335 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 IGFBP3P17936 291 aaPredicted RBP2.37□□□□□ -2.03
VPS13B-207ENST00000518569 AK4P27144 223 aaPredicted RBP2.37□□□□□ -2.03
VPS13B-207ENST00000518569 ELK4P28324 431 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 PYCR1P32322 319 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 KLK7P49862 253 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 HCCSP53701 268 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 DLX1P56177 255 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 TCL1AP56279 114 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 TAS2R41P59536 307 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 TAS2R19P59542 299 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 GNG2P59768 71 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 RBX1P62877 108 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 HIST1H3AP68431 136 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 H3F3AP84243 136 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 OR2F1Q13607 317 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 SNRNP35Q16560 246 aaKnown RBP2.37□□□□□ -2.03
VPS13B-207ENST00000518569 ZBED5Q49AG3 693 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 TPTE2P1Q5T6R2 138 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 GPRC6AQ5T6X5 926 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 FAM27D1Q5T7N8 215 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 OR52E8Q6IFG1 317 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 DCUN1D2Q6PH85 259 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 Q6ZT83 130 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 HIST2H3AQ71DI3 136 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 PRSS41Q7RTY9 318 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 FAM19A5Q7Z5A7 132 aaPredicted RBP2.37□□□□□ -2.03
VPS13B-207ENST00000518569 TMEM150AQ86TG1 271 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms