RNA–Protein interactions for RNA: ENST00000515939.1

RNU4ATAC11P-201, Transcript of RNA, U4atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4ATAC11P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC11P-201ENST00000515939 ISL1P61371 349 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 NCALDP61601 193 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 CX3CL1P78423 397 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 HAMPP81172 84 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 CDK5Q00535 292 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 MS4A2Q01362 244 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 PAX5Q02548 391 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 ROM1Q03395 351 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 LIPEQ05469 1076 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 GABPB1Q06547 395 aaPredicted RBP0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 CKAP4Q07065 602 aaKnown RBP0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 RAB40BQ12829 278 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 SF3A3Q12874 501 aaKnown RBP eCLIP0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 TSPAN31Q12999 210 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 IL24Q13007 206 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 PDZK1IP1Q13113 114 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 LSAMPQ13449 338 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 IL18R1Q13478 541 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 DCTN2Q13561 401 aaKnown RBP0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 RBM39Q14498 530 aaKnown RBP0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 ATXN7L3Q14CW9 347 aaPredicted RBP0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 GRK1Q15835 563 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 CYP51A1Q16850 503 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 LTC4SQ16873 150 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 TIGD6Q17RP2 521 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 C5orf64Q2M2E5 130 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 DEFB135Q30KP9 77 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 C12orf74Q32Q52 190 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 SMIM21Q3B7S5 101 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 LGALS9BQ3B8N2 356 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 SLC36A3Q495N2 470 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 LRRC23Q53EV4 343 aaPredicted RBP0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 IFI44LQ53G44 452 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 TM4SF20Q53R12 229 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 FAM27D1Q5T7N8 215 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 LCE2AQ5TA79 106 aaPredicted RBP0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 TMEM236Q5W0B7 351 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 PLCXD3Q63HM9 321 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 ZNF660Q6AZW8 331 aaPredicted RBP0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 SIGIRRQ6IA17 410 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 ZNF343Q6P1L6 599 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 ZNF529Q6P280 563 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 PGM2L1Q6PCE3 622 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 CD200R1LQ6Q8B3 271 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 ZNF322Q6U7Q0 402 aaPredicted RBP0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 UNQ9165/PRO28630Q6UXU0 137 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 GSG1LQ6UXU4 331 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 ASCL4Q6XD76 172 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 Q6ZRM9 215 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 Q6ZRN7 208 aaPredicted RBP0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 SLC25A48Q6ZT89 311 aaKnown RBP0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 RASSF6Q6ZTQ3 369 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 LINC00336Q6ZUF6 198 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 SLC25A26Q70HW3 274 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 ZNF767PQ75MW2 155 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 ASRGL1Q7L266 308 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 GDPD3Q7L5L3 318 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 HDXQ7Z353 690 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 HDDC2Q7Z4H3 204 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 MOB3BQ86TA1 216 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 ZDHHC13Q8IUH4 622 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 ERI1Q8IV48 349 aaKnown RBP0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 IFT20Q8IY31 132 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 ELMOD2Q8IZ81 293 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 HS3ST5Q8IZT8 346 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 TMEM61Q8N0U2 210 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 OR8H3Q8N146 312 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 FAM58AQ8N1B3 248 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 GAPTQ8N292 157 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 LYPD1Q8N2G4 141 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 LILRB2Q8N423 598 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 FAM24BQ8N5W8 94 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 YIPF7Q8N8F6 280 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 ANKRD42Q8N9B4 389 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 ASCC1Q8N9N2 400 aaKnown RBP0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 Q8NAQ8 132 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 CSNK1G2-AS1Q8NCQ2 148 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 LFNGQ8NES3 379 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 CSNK2A3Q8NEV1 391 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 NPBQ8NG41 125 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 OR5T1Q8NG75 326 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 OR8J3Q8NGG0 315 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 OR52L1Q8NGH7 329 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 OR51A4Q8NGJ6 313 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 OR51A2Q8NGJ7 313 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 OR51T1Q8NGJ9 327 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 OR9G4Q8NGQ1 327 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 OR6Q1Q8NGQ2 317 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 OR6N2Q8NGY6 317 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 OR2AJ1Q8NGZ0 328 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 OR9G1Q8NH87 305 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 OR1L1Q8NH94 360 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 TRMT10AQ8TBZ6 339 aaKnown RBP0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 MRGPRDQ8TDS7 321 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 TSPEARQ8WU66 669 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 EDARADDQ8WWZ3 215 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 RGP1Q92546 391 aaPredicted RBP0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 EMG1Q92979 244 aaKnown RBP0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 STMN2Q93045 179 aa0.84□□□□□ -2.27
RNU4ATAC11P-201ENST00000515939 SPTSSAQ969W0 71 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms