RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 SLC10A1Q14973 349 aa8.38□□□□□ -1.07
VCAN-210ENST00000513960 OR10S1Q8NGN2 331 aa8.38□□□□□ -1.07
VCAN-210ENST00000513960 NAT6Q93015 286 aa8.38□□□□□ -1.07
VCAN-210ENST00000513960 USP34Q70CQ2 3546 aa8.38□□□□□ -1.07
VCAN-210ENST00000513960 K7N7A8 449 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 TP53I11O14683 189 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 EPHA8P29322 1005 aaPredicted RBP8.37□□□□□ -1.07
VCAN-210ENST00000513960 OR51H1Q8NH63 302 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 CCDC74BQ96LY2 380 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 SPIN2AQ99865 258 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 SPIN2BQ9BPZ2 258 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 PITPNC1Q9UKF7 332 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 FUT9Q9Y231 359 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 LHFPL6Q9Y693 200 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 IGKV1-9A0A0C4DH69 117 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 IGHV5-10-1A0A0J9YXX1 117 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 A0A1W2PNV4 684 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 A0A1W2PQM1 296 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 EFNA2O43921 213 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 PNLIPP16233 465 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 ANOS1P23352 680 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 CSNK1A1P48729 337 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 SHBQ15464 509 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 NCR3LG1Q68D85 454 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 GPR137CQ8N3F9 429 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 ZNF664Q8N3J9 261 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 IL22RA1Q8N6P7 574 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 NOXO1Q8NFA2 376 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 HIST1H2AAQ96QV6 131 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 RSG1Q9BU20 258 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 PLEKHF2Q9H8W4 249 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 AURKAIP1Q9NWT8 199 aaPredicted RBP8.37□□□□□ -1.07
VCAN-210ENST00000513960 TMED3Q9Y3Q3 217 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 COL5A1P20908 1838 aaPredicted RBP8.37□□□□□ -1.07
VCAN-210ENST00000513960 FAM186AA6NE01 2351 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 A6NNC1 897 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 CCNOP22674 350 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 ECI1P42126 302 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 TMEM187Q14656 261 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 ICAM4Q14773 271 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 PIGYQ3MUY2 71 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 PRAMEF20Q5VT98 475 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 FBXL14Q8N1E6 418 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 PRR18Q8N4B5 295 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 OR10A7Q8NGE5 316 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 HLA-CQ95604 372 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 RBMXL1Q96E39 390 aaKnown RBP8.37□□□□□ -1.07
VCAN-210ENST00000513960 SPACA9Q96E40 222 aaPredicted RBP8.37□□□□□ -1.07
VCAN-210ENST00000513960 B3GAT1Q9P2W7 334 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 TUBD1Q9UJT1 453 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 IGHV3-15A0A0B4J1V0 119 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 AADACP22760 399 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 PCP4P48539 62 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 RPS16P62249 146 aaKnown RBP8.37□□□□□ -1.07
VCAN-210ENST00000513960 TMEM252Q8N6L7 170 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 MOB1AQ9H8S9 216 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 PLA2G3Q9NZ20 509 aa8.37□□□□□ -1.07
VCAN-210ENST00000513960 SHANK1Q9Y566 2161 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 C9J4A7 227 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 COL10A1Q03692 680 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 FOXO1Q12778 655 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 IL15RAQ13261 267 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 P2RY6Q15077 328 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 IZUMO4Q1ZYL8 232 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 C5orf24Q7Z6I8 188 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 MYPOPQ86VE0 399 aaPredicted RBP8.36□□□□□ -1.07
VCAN-210ENST00000513960 POC1BQ8TC44 478 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 GNPNAT1Q96EK6 184 aaPredicted RBP8.36□□□□□ -1.07
VCAN-210ENST00000513960 TMEM68Q96MH6 324 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 OXGR1Q96P68 337 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 RASL10BQ96S79 203 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 MRPL13Q9BYD1 178 aaKnown RBP8.36□□□□□ -1.07
VCAN-210ENST00000513960 TUBG2Q9NRH3 451 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 SIT1Q9Y3P8 196 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 MYO7BQ6PIF6 2116 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 M0R143 59 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 CHST1O43916 411 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 RBMXL2O75526 392 aaKnown RBP8.36□□□□□ -1.07
VCAN-210ENST00000513960 ZNF133P52736 654 aaPredicted RBP8.36□□□□□ -1.07
VCAN-210ENST00000513960 SLC25A53Q5H9E4 307 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 KDF1Q8NAX2 398 aaPredicted RBP8.36□□□□□ -1.07
VCAN-210ENST00000513960 OR2M3Q8NG83 312 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 OR1P1Q8NH06 330 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 PIGCQ92535 297 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 IL22RA2Q969J5 263 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 BOD1Q96IK1 185 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 TP53RKQ96S44 253 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 PATZ1Q9HBE1 687 aaKnown RBP8.36□□□□□ -1.07
VCAN-210ENST00000513960 CACNA1EQ15878 2313 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 LAMA1P25391 3075 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 C3orf85A0A1B0GTC6 90 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 K7ESF4 209 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 ZNHIT1O43257 154 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 TGOLN2O43493 480 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 MALLQ13021 153 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 OR13D1Q8NGV5 346 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 OR4X1Q8NH49 305 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 TMEM18Q96B42 140 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 DCAF16Q9NXF7 216 aa8.36□□□□□ -1.07
VCAN-210ENST00000513960 CEP192Q8TEP8 1941 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms