RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 RCC2Q9P258 522 aaKnown RBP7.87□□□□□ -1.15
RNF4-221ENST00000513643 CKLFQ9UBR5 152 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 FAM96BQ9Y3D0 163 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 SESN1Q9Y6P5 492 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 A0A1W2PP11 408 aa7.86□□□□□ -1.15
RNF4-221ENST00000513643 A0A1W2PRD5 423 aa7.86□□□□□ -1.15
RNF4-221ENST00000513643 A0A1W2PRF3 423 aa7.86□□□□□ -1.15
RNF4-221ENST00000513643 A0A1W2PRM7 423 aa7.86□□□□□ -1.15
RNF4-221ENST00000513643 MEX3AA1L020 520 aaKnown RBP7.86□□□□□ -1.15
RNF4-221ENST00000513643 FUOMA2VDF0 154 aa7.86□□□□□ -1.15
RNF4-221ENST00000513643 GPR137BO60478 399 aa7.86□□□□□ -1.15
RNF4-221ENST00000513643 MRPS14O60783 128 aaKnown RBP7.86□□□□□ -1.15
RNF4-221ENST00000513643 TSPAN9O75954 239 aa7.86□□□□□ -1.15
RNF4-221ENST00000513643 IGLV1-47P01700 117 aa7.86□□□□□ -1.15
RNF4-221ENST00000513643 ZNF44P15621 663 aa7.86□□□□□ -1.15
RNF4-221ENST00000513643 GDNFP39905 211 aa7.86□□□□□ -1.15
RNF4-221ENST00000513643 DYNLT3P51808 116 aa7.86□□□□□ -1.15
RNF4-221ENST00000513643 SNU13P55769 128 aaKnown RBP7.86□□□□□ -1.15
RNF4-221ENST00000513643 EDDM3AQ14507 147 aa7.86□□□□□ -1.15
RNF4-221ENST00000513643 RSU1Q15404 277 aa7.86□□□□□ -1.15
RNF4-221ENST00000513643 TBCEQ15813 527 aaPredicted RBP7.86□□□□□ -1.15
RNF4-221ENST00000513643 MPV17LQ2QL34 196 aa7.86□□□□□ -1.15
RNF4-221ENST00000513643 FAM27D1Q5T7N8 215 aa7.86□□□□□ -1.15
RNF4-221ENST00000513643 ZNF782Q6ZMW2 699 aaPredicted RBP7.86□□□□□ -1.15
RNF4-221ENST00000513643 LHFPL4Q7Z7J7 247 aa7.86□□□□□ -1.15
RNF4-221ENST00000513643 NKAIN3Q8N8D7 197 aa7.86□□□□□ -1.15
RNF4-221ENST00000513643 OR13D1Q8NGV5 346 aa7.86□□□□□ -1.15
RNF4-221ENST00000513643 OR5R1Q8NH85 324 aa7.86□□□□□ -1.15
RNF4-221ENST00000513643 PLPPR1Q8TBJ4 325 aa7.86□□□□□ -1.15
RNF4-221ENST00000513643 MALSU1Q96EH3 234 aa7.86□□□□□ -1.15
RNF4-221ENST00000513643 TMEM133Q9H2Q1 129 aa7.86□□□□□ -1.15
RNF4-221ENST00000513643 C16orf95Q9H693 158 aa7.86□□□□□ -1.15
RNF4-221ENST00000513643 VPREB3Q9UKI3 123 aa7.86□□□□□ -1.15
RNF4-221ENST00000513643 ING4Q9UNL4 249 aa7.86□□□□□ -1.15
RNF4-221ENST00000513643 ST3GAL6Q9Y274 331 aa7.86□□□□□ -1.15
RNF4-221ENST00000513643 TBL2Q9Y4P3 447 aaKnown RBP7.86□□□□□ -1.15
RNF4-221ENST00000513643 TRGV10A0A0A0MS01 117 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 IGHV2-26A0A0B4J1V2 119 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 KBTBD11-OT1A0A1B0GTJ5 212 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 A0A1B0GUS0 222 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 FAM90A10PA6NDY2 464 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 FAM90A18PA6NE21 464 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 FAM90A16PA6NEW6 464 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 FAM90A20PA6NIJ5 464 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 FAM90A7PA6NKC0 464 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 ZNF729A6NN14 1252 aaPredicted RBP7.85□□□□□ -1.15
RNF4-221ENST00000513643 FAM90A22PA8MWA6 464 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 FAM90A12PA8MX19 464 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 FAM90A5PA8MXJ8 464 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 FAM90A23PA8MXZ1 464 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 LY6LH3BQJ8 138 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 GEMIN2O14893 280 aaKnown RBP7.85□□□□□ -1.15
RNF4-221ENST00000513643 CLPXO76031 633 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 HTR3BO95264 441 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 MAS1P04201 325 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 FAM90A15PP0C7V4 464 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 FAM90A13PP0C7W8 464 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 FAM90A14PP0C7W9 464 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 FAM90A24PP0C7X0 464 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 GTF2F2P13984 249 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 SRMP19623 302 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 MAP2K4P45985 399 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 QRFPP83859 136 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 SCN1BQ07699 218 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 GPR176Q14439 515 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 MED22Q15528 200 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 KRBOX4Q5JUW0 171 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 UTF1Q5T230 341 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 MINOS1Q5TGZ0 78 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 LIPKQ5VXJ0 399 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 SIGIRRQ6IA17 410 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 SLC35E4Q6ICL7 350 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 CD200R1LQ6Q8B3 271 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 GLIPR1L1Q6UWM5 242 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 BAIAP2L2Q6UXY1 529 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 GDPGP1Q6ZNW5 385 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 SUMF2Q8NBJ7 301 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 TMEM104Q8NE00 496 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 OR4P4Q8NGL7 312 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 MUL1Q969V5 352 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 CNBD2Q96M20 576 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 NR1H4Q96RI1 486 aaPredicted RBP7.85□□□□□ -1.15
RNF4-221ENST00000513643 GFI1Q99684 422 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 MGLLQ99685 303 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 DPCDQ9BVM2 203 aaPredicted RBP7.85□□□□□ -1.15
RNF4-221ENST00000513643 YTHDF1Q9BYJ9 559 aaKnown RBP7.85□□□□□ -1.15
RNF4-221ENST00000513643 BARHL1Q9BZE3 327 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 SLITRK2Q9H156 845 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 ACOT13Q9NPJ3 140 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 PCDHB16Q9NRJ7 776 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 OR6C3Q9NZP0 311 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 GHRLQ9UBU3 117 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 MINOS1-NBL1R4GNA1 71 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 WNK1Q9H4A3 2382 aa7.85□□□□□ -1.15
RNF4-221ENST00000513643 SLC22A1O15245 554 aa7.84□□□□□ -1.15
RNF4-221ENST00000513643 MT-ND4P03905 459 aa7.84□□□□□ -1.15
RNF4-221ENST00000513643 GLAP06280 429 aa7.84□□□□□ -1.15
RNF4-221ENST00000513643 MDKP21741 143 aaPredicted RBP7.84□□□□□ -1.15
RNF4-221ENST00000513643 COX7A1P24310 79 aa7.84□□□□□ -1.15
RNF4-221ENST00000513643 CDK2P24941 298 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms