RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 CCL21O00585 134 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 PRKYO43930 277 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 EIF1BO60739 113 aaKnown RBP2.78□□□□□ -1.96
NUP54-209ENST00000510569 UGT2B11O75310 529 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 EEDO75530 441 aaKnown RBP2.78□□□□□ -1.96
NUP54-209ENST00000510569 CD8AP01732 235 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 C1GALT1C1LP0DN25 315 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 TBPP20226 339 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 GABRR1P24046 479 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 RPS12P25398 132 aaKnown RBP2.78□□□□□ -1.96
NUP54-209ENST00000510569 RPA3P35244 121 aaPredicted RBP2.78□□□□□ -1.96
NUP54-209ENST00000510569 PMELP40967 661 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 EIF1P41567 113 aaKnown RBP2.78□□□□□ -1.96
NUP54-209ENST00000510569 HCCSP53701 268 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 DLX6P56179 175 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 VSX2P58304 361 aaPredicted RBP2.78□□□□□ -1.96
NUP54-209ENST00000510569 SNAP25P60880 206 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 TIMM10P62072 90 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 PUDPQ08623 228 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 DAZ2Q13117 558 aaKnown RBP2.78□□□□□ -1.96
NUP54-209ENST00000510569 SKP2Q13309 424 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 EIF2B1Q14232 305 aaKnown RBP2.78□□□□□ -1.96
NUP54-209ENST00000510569 GGTLC2Q14390 218 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 EDDM3AQ14507 147 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 ZNF235Q14590 738 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 C16orf72Q14CZ0 275 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 IRF4Q15306 451 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 GUSBP1Q15486 140 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 OR1Q1Q15612 314 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 TRAM1Q15629 374 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 HIST3H3Q16695 136 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 CYP51A1Q16850 503 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 TIGITQ495A1 244 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 LIN52Q52LA3 116 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 TMEM97Q5BJF2 176 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 CARD16Q5EG05 197 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 FAM71E1Q6IPT2 247 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 RWDD4Q6NW29 188 aaKnown RBP2.78□□□□□ -1.96
NUP54-209ENST00000510569 CASP12Q6UXS9 341 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 C4orf22Q6V702 233 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 CPNE9Q8IYJ1 553 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 BLIDQ8IZY5 108 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 EID2Q8N6I1 236 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 GPR32P1Q8NGA4 272 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 OR10G3Q8NGC4 313 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 OR13D1Q8NGV5 346 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 OR10K1Q8NGX5 313 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 C11orf40Q8WZ69 217 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 IMP4Q96G21 291 aaKnown RBP2.78□□□□□ -1.96
NUP54-209ENST00000510569 ADTRPQ96IZ2 230 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 GPR21Q99679 349 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 DOK1Q99704 481 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 C2orf88Q9BSF0 95 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 TMEM59Q9BXS4 323 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 UGT2B28Q9BY64 529 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 CHIAQ9BZP6 476 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 MIXL1Q9H2W2 232 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 OR51J1Q9H342 316 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 TMEM138Q9NPI0 162 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 ACOT13Q9NPJ3 140 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 DAZ3Q9NR90 486 aaKnown RBP2.78□□□□□ -1.96
NUP54-209ENST00000510569 GSKIPQ9P0R6 139 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 ZNF225Q9UK10 706 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 VPREB3Q9UKI3 123 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 SLC7A11Q9UPY5 501 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 TP53TG1Q9Y2A0 90 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 TP53TG5Q9Y2B4 290 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 LRRC37AA6NMS7 1700 aa2.78□□□□□ -1.96
NUP54-209ENST00000510569 MYH7BA7E2Y1 1941 aa2.78□□□□□ -1.97
NUP54-209ENST00000510569 ROBO3Q96MS0 1386 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 LRCOL1A6NCL2 159 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 PPP5D1E7EU14 171 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 H3BQF6 201 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 GFYI3L273 518 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 ZNF593O00488 134 aaPredicted RBP2.77□□□□□ -1.97
NUP54-209ENST00000510569 FAM189A1O60320 539 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 PLIN3O60664 434 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 RP2O75695 350 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 SLC22A5O76082 557 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 IGHV2-5P01817 119 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 SEMG1P04279 462 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 LGALS2P05162 132 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 CTSLP07711 333 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 COX4I1P13073 169 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 AKR1C4P17516 323 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 MYL12AP19105 171 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 OGNP20774 298 aaKnown RBP2.77□□□□□ -1.97
NUP54-209ENST00000510569 S100PP25815 95 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 ERP29P30040 261 aaKnown RBP2.77□□□□□ -1.97
NUP54-209ENST00000510569 SLC6A1P30531 599 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 IFNGR2P38484 337 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 AQP5P55064 265 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 PFN3P60673 137 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 RPS14P62263 151 aaKnown RBP2.77□□□□□ -1.97
NUP54-209ENST00000510569 PAFAH1B2P68402 229 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 SLC7A9P82251 487 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 BCL2L1Q07817 233 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 PNOCQ13519 176 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 FAM53BQ14153 422 aa2.77□□□□□ -1.97
NUP54-209ENST00000510569 TFDP2Q14188 446 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms