RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 OR5W2Q8NH69 310 aa3.82□□□□□ -1.8
NIPBL-206ENST00000509429 OR5K2Q8NHB8 316 aa3.82□□□□□ -1.8
NIPBL-206ENST00000509429 THAP6Q8TBB0 222 aa3.82□□□□□ -1.8
NIPBL-206ENST00000509429 GATAD1Q8WUU5 269 aa3.82□□□□□ -1.8
NIPBL-206ENST00000509429 TMEM170AQ8WVE7 144 aa3.82□□□□□ -1.8
NIPBL-206ENST00000509429 GPR146Q96CH1 333 aa3.82□□□□□ -1.8
NIPBL-206ENST00000509429 RNF183Q96D59 192 aa3.82□□□□□ -1.8
NIPBL-206ENST00000509429 GALNT14Q96FL9 552 aa3.82□□□□□ -1.8
NIPBL-206ENST00000509429 DIRAS2Q96HU8 199 aa3.82□□□□□ -1.8
NIPBL-206ENST00000509429 GPER1Q99527 375 aa3.82□□□□□ -1.8
NIPBL-206ENST00000509429 NKX3-1Q99801 234 aaPredicted RBP3.82□□□□□ -1.8
NIPBL-206ENST00000509429 RASL11BQ9BPW5 248 aa3.82□□□□□ -1.8
NIPBL-206ENST00000509429 KCTD14Q9BQ13 255 aaPredicted RBP3.82□□□□□ -1.8
NIPBL-206ENST00000509429 SLC17A9Q9BYT1 436 aa3.82□□□□□ -1.8
NIPBL-206ENST00000509429 C20orf27Q9GZN8 174 aa3.82□□□□□ -1.8
NIPBL-206ENST00000509429 RNF167Q9H6Y7 350 aa3.82□□□□□ -1.8
NIPBL-206ENST00000509429 NHEJ1Q9H9Q4 299 aaPredicted RBP3.82□□□□□ -1.8
NIPBL-206ENST00000509429 POLD4Q9HCU8 107 aa3.82□□□□□ -1.8
NIPBL-206ENST00000509429 GPR84Q9NQS5 396 aa3.82□□□□□ -1.8
NIPBL-206ENST00000509429 SMCO4Q9NRQ5 59 aa3.82□□□□□ -1.8
NIPBL-206ENST00000509429 CISHQ9NSE2 258 aa3.82□□□□□ -1.8
NIPBL-206ENST00000509429 FBXL12Q9NXK8 326 aa3.82□□□□□ -1.8
NIPBL-206ENST00000509429 COMMD3Q9UBI1 195 aa3.82□□□□□ -1.8
NIPBL-206ENST00000509429 KLHDC2Q9Y2U9 406 aa3.82□□□□□ -1.8
NIPBL-206ENST00000509429 SPIN1Q9Y657 262 aaPredicted RBP3.82□□□□□ -1.8
NIPBL-206ENST00000509429 FOCADQ5VW36 1801 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 SBF2Q86WG5 1849 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 TRAV24A0A0B4J272 114 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 PRAMEF33A0A0G2JMD5 474 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 GAGE12JA6NER3 117 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 LILRA5A6NI73 299 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 IFITM10A6NMD0 228 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 CEACAM18A8MTB9 384 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 ZNF724A8MTY0 619 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 BTNL10A8MVZ5 291 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 F5H5K5 113 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 J3KR12 359 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 VCYO14598 125 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 PLPP2O43688 288 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 TMPRSS11DO60235 418 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 GAGE7O76087 117 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 ZNF432O94892 652 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 C1orf105O95561 183 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 H2BFMP0C1H6 154 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 OR4Q2P0C623 313 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 GAGE12FP0CL80 117 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 GAGE12GP0CL81 117 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 GAGE12IP0CL82 117 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 TMEM225BP0DP42 221 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 MYL12AP19105 171 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 GGT1P19440 569 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 EVI2AP22794 236 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 IL2RGP31785 369 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 HRH1P35367 487 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 OR3A2P47893 321 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 PFN3P60673 137 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 OSTNP61366 133 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 SNRPD2P62316 118 aaKnown RBP3.81□□□□□ -1.8
NIPBL-206ENST00000509429 GAGE4Q13068 117 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 CLINT1Q14677 625 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 LRRC26Q2I0M4 334 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 SYTL3Q4VX76 610 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 DMRTC1Q5HYR2 192 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 C1orf195Q5TG92 126 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 DMKNQ6E0U4 476 aaPredicted RBP3.81□□□□□ -1.8
NIPBL-206ENST00000509429 EIF5AL1Q6IS14 154 aaKnown RBP3.81□□□□□ -1.8
NIPBL-206ENST00000509429 SLC18B1Q6NT16 456 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 ZNF343Q6P1L6 599 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 SLC25A48Q6ZT89 311 aaKnown RBP3.81□□□□□ -1.8
NIPBL-206ENST00000509429 PRSS48Q7RTY5 328 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 C16orf82Q7Z2V1 217 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 SLC35F2Q8IXU6 374 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 OR2L13Q8N349 312 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 RYBPQ8N488 228 aaPredicted RBP3.81□□□□□ -1.8
NIPBL-206ENST00000509429 FAM24BQ8N5W8 94 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 BMPERQ8N8U9 685 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 OR10AD1Q8NGE0 317 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 OR1L8Q8NGR8 309 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 OR2K2Q8NGT1 345 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 DOK4Q8TEW6 326 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 DDIT4LQ96D03 193 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 S1PR3Q99500 378 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 S100A13Q99584 98 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 MACROD1Q9BQ69 325 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 SLC25A33Q9BSK2 321 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 ZBP1Q9H171 429 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 IKZF5Q9H5V7 419 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 GALNT9Q9HCQ5 603 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 TXNRD2Q9NNW7 524 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 FGF20Q9NP95 211 aaPredicted RBP3.81□□□□□ -1.8
NIPBL-206ENST00000509429 KCNJ16Q9NPI9 418 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 LYRM2Q9NU23 88 aaPredicted RBP3.81□□□□□ -1.8
NIPBL-206ENST00000509429 SLC23A2Q9UGH3 650 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 TRMT112Q9UI30 125 aaKnown RBP3.81□□□□□ -1.8
NIPBL-206ENST00000509429 LSM7Q9UK45 103 aaKnown RBP3.81□□□□□ -1.8
NIPBL-206ENST00000509429 CES1P1Q9UKY3 287 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 MMP17Q9ULZ9 603 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 SLC7A7Q9UM01 511 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 HS3ST2Q9Y278 367 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 ZNF780BQ9Y6R6 833 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms